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Title | B. HALODURANS RNASE H CATALYTIC DOMAIN E188A MUTANT IN COMPL MG2+ AND RNA/DNA HYBRID (REACTION PRODUCT) | |
Keywords | RNASE H, RIBONUCLEASE H, RNA/DNA HYBRID, HYDROLASE-RNA-DNA C | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2G8V | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | RNA | B | 6 | 128 | 0 | |
2 | Other macromolecule | 5'-D(*AP*TP*GP*TP*CP*G)-3' | C | 6 | 121 | 0 |
3 | Protein | RIBONUCLEASE H | A | 133 | 1077 | 0 |
4 | Ligand | RIBONUCLEASE H | A | 4 | 0 | 8 |
5 | Water | 159 | 0 | 159 | ||
total | 308 | 1326 | 167 |
Unit 3 | GLU61 GLU62 ILE63 ILE64 TRP65 GLU66 SER67 LEU68 SER69 VAL70 ASP71 VAL72 GLY73 SER74 GLN75 GLY76 ASN77 PRO78 GLY79 ILE80 VAL81 GLU82 TYR83 LYS84 GLY85 VAL86 ASP87 THR88 LYS89 THR90 GLY91 GLU92 VAL93 LEU94 PHE95 GLU96 ARG97 GLU98 PRO99 ILE100 PRO101 ILE102 GLY103 THR104 ASN105 ASN106 MET107 GLY108 GLU109 PHE110 LEU111 ALA112 ILE113 VAL114 HIS115 GLY116 LEU117 ARG118 TYR119 LEU120 LYS121 GLU122 ARG123 ASN124 SER125 ARG126 LYS127 PRO128 ILE129 TYR130 SER131 ASP132 SER133 GLN134 THR135 ALA136 ILE137 LYS138 TRP139 VAL140 LYS141 ASP142 LYS143 LYS144 ALA145 LYS146 SER147 THR148 LEU149 VAL150 ARG151 ASN152 GLU153 GLU154 THR155 ALA156 LEU157 ILE158 TRP159 LYS160 LEU161 VAL162 ASP163 GLU164 ALA165 GLU166 GLU167 TRP168 LEU169 ASN170 THR171 HIS172 THR173 TYR174 GLU175 THR176 PRO177 ILE178 LEU179 LYS180 TRP181 GLN182 THR183 ASP184 LYS185 TRP186 GLY187 ALA188 ILE189 LYS190 ALA191 ASP192 TYR193 |
Unit 1 | U1 C2 G3 A4 C5 A6 |
Unit 2 | DA1 DT2 DG3 DT4 DC5 DG6 |
Unit 4 | MG401 MG402 EOH501 EOH502 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |