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Sequence, Chains, Asymmetric and Biological Units

Title RNA STRUCTURE CONTAINING GU BASE PAIRS
Keywords RNA CRYSTAL STRUCTURE, TANDEM GU BASE PAIRS
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2G3S     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 8 169 0
2  RNA    B 8 169 0
3  RNA    C 8 169 0
4  RNA    D 8 169 0
5  RNA    E 8 169 0
6  RNA    F 8 169 0
7  RNA    G 8 169 0
8  RNA    H 8 169 0
9  RNA    I 8 169 0
10  RNA    J 8 169 0
11  Ligand   5'-R(*GP*GP*CP*GP*UP*GP*CP*C)-3'  C 1 0 1
12  Ligand   5'-R(*GP*GP*CP*GP*UP*GP*CP*C)-3'  E 1 0 1
13 Water     613 0 613
total       695 1690 615

Nucleic acids
Unit 1 G101 G102 C103 G104 U105 G106 C107 C108
Unit 2 G109 G110 C111 G112 U113 G114 C115 C116
Unit 3 G201 G202 C203 G204 U205 G206 C207 C208
Unit 4 G209 G210 C211 G212 U213 G214 C215 C216
Unit 5 G301 G302 C303 G304 U305 G306 C307 C308
Unit 6 G309 G310 C311 G312 U313 G314 C315 C316
Unit 7 G401 G402 C403 G404 U405 G406 C407 C408
Unit 8 G409 G410 C411 G412 U413 G414 C415 C416
Unit 9 G501 G502 C503 G504 U505 G506 C507 C508
Unit 10 G509 G510 C511 G512 U513 G514 C515 C516

Ligands
Unit 11 MG1602
Unit 12 MG1601

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany