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Sequence, Chains, Asymmetric and Biological Units

Title CATALYTIC DOMAIN OF CDY
Keywords CHROMODOMAIN, CHROMOSOME Y, STRUCTURAL GENOMICS, STRUCTURAL CONSORTIUM, SGC, GENE REGULATION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2FW2     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TESTIS-SPECIFIC CHROMODOMAIN PROTEIN Y 2  A 258 2000 0
2  Protein   TESTIS-SPECIFIC CHROMODOMAIN PROTEIN Y 2  B 255 1975 0
3  Protein   TESTIS-SPECIFIC CHROMODOMAIN PROTEIN Y 2  C 256 1984 0
4  Protein   TESTIS-SPECIFIC CHROMODOMAIN PROTEIN Y 2  D 257 1989 0
5  Protein   TESTIS-SPECIFIC CHROMODOMAIN PROTEIN Y 2  E 259 1993 0
6  Protein   TESTIS-SPECIFIC CHROMODOMAIN PROTEIN Y 2  F 260 2009 0
7 Water     664 0 664
total       2209 11950 664
Proteins
Unit 1 TYR3 ARG4 ASP5 ILE6 VAL7 VAL8 LYS9 LYS10 GLU11 ASP12 GLY13 PHE14 THR15 GLN16 ILE17 VAL18 LEU19 SER20 THR21 ARG22 SER23 THR24 GLU25 LYS26 ASN27 ALA28 LEU29 ASN30 THR31 GLU32 VAL33 ILE34 LYS35 GLU36 MET37 VAL38 ASN39 ALA40 LEU41 ASN42 SER43 ALA44 ALA45 ALA46 ASP47 ASP48 SER49 LYS50 LEU51 VAL52 LEU53 PHE54 SER55 ALA56 ALA57 GLY58 SER59 VAL60 PHE61 CYS62 CYS63 GLY64 LEU65 ASP66 PHE67 GLY68 TYR69 PHE70 VAL71 ARG72 HIS73 LEU74 ARG75 ASN76 ASP77 ARG78 ASN79 THR80 ALA81 SER82 LEU83 GLU84 MET85 VAL86 ASP87 THR88 ILE89 LYS90 ASN91 PHE92 VAL93 ASN94 THR95 PHE96 ILE97 GLN98 PHE99 LYS100 LYS101 PRO102 ILE103 VAL104 VAL105 SER106 VAL107 ASN108 GLY109 PRO110 ALA111 ILE112 GLY113 LEU114 GLY115 ALA116 SER117 ILE118 LEU119 PRO120 LEU121 CYS122 ASP123 LEU124 VAL125 TRP126 ALA127 ASN128 GLU129 LYS130 ALA131 TRP132 PHE133 GLN134 THR135 PRO136 TYR137 THR138 THR139 PHE140 GLY141 GLN142 SER143 PRO144 ASP145 GLY146 CYS147 SER148 SER149 ILE150 THR151 PHE152 PRO153 LYS154 MET155 MET156 GLY157 LYS158 ALA159 SER160 ALA161 ASN162 GLU163 MET164 LEU165 ILE166 ALA167 GLY168 ARG169 LYS170 LEU171 THR172 ALA173 ARG174 GLU175 ALA176 CYS177 ALA178 LYS179 GLY180 LEU181 VAL182 SER183 GLN184 VAL185 PHE186 LEU187 THR188 GLY189 THR190 PHE191 THR192 GLN193 GLU194 VAL195 MET196 ILE197 GLN198 ILE199 LYS200 GLU201 LEU202 ALA203 SER204 TYR205 ASN206 ALA207 ILE208 VAL209 LEU210 GLU211 GLU212 CYS213 LYS214 ALA215 LEU216 VAL217 ARG218 CYS219 ASN220 ILE221 LYS222 LEU223 GLU224 LEU225 GLU226 GLN227 ALA228 ASN229 GLU230 ARG231 GLU232 CYS233 GLU234 VAL235 LEU236 ARG237 LYS238 ILE239 TRP240 SER241 SER242 ALA243 GLN244 GLY245 ILE246 GLU247 SER248 MET249 LEU250 LYS251 TYR252 VAL253 GLU254 ASN255 LYS256 ILE257 ASP258 GLU259 PHE260
Unit 2 ILE1 THR2 TYR3 ARG4 ASP5 ILE6 VAL7 VAL8 LYS9 LYS10 GLU11 ASP12 GLY13 PHE14 THR15 GLN16 ILE17 VAL18 LEU19 SER20 THR21 ARG22 SER23 THR24 GLU25 LYS26 ASN27 ALA28 LEU29 ASN30 THR31 GLU32 VAL33 ILE34 LYS35 GLU36 MET37 VAL38 ASN39 ALA40 LEU41 ASN42 SER43 ALA44 ALA45 ALA46 ASP47 ASP48 SER49 LYS50 LEU51 VAL52 LEU53 PHE54 SER55 ALA56 ALA57 GLY58 SER59 VAL60 PHE61 CYS62 CYS63 GLY64 LEU65 ASP66 PHE67 GLY68 TYR69 PHE70 VAL71 ARG72 HIS73 LEU74 ARG75 ASN76 ASP77 ARG78 ASN79 THR80 ALA81 SER82 LEU83 GLU84 MET85 VAL86 ASP87 THR88 ILE89 LYS90 ASN91 PHE92 VAL93 ASN94 THR95 PHE96 ILE97 GLN98 PHE99 LYS100 LYS101 PRO102 ILE103 VAL104 VAL105 SER106 VAL107 ASN108 GLY109 PRO110 ALA111 ILE112 GLY113 LEU114 GLY115 ALA116 SER117 ILE118 LEU119 PRO120 LEU121 CYS122 ASP123 LEU124 VAL125 TRP126 ALA127 ASN128 GLU129 LYS130 ALA131 TRP132 PHE133 GLN134 THR135 PRO136 TYR137 THR138 THR139 PHE140 GLY141 GLN142 SER143 PRO144 ASP145 GLY146 CYS147 SER148 SER149 ILE150 THR151 PHE152 PRO153 LYS154 MET155 MET156 GLY157 LYS158 ALA159 SER160 ALA161 ASN162 GLU163 MET164 LEU165 ILE166 ALA167 GLY168 ARG169 LYS170 LEU171 THR172 ALA173 ARG174 GLU175 ALA176 CYS177 ALA178 LYS179 GLY180 LEU181 VAL182 SER183 GLN184 VAL185 PHE186 LEU187 THR188 GLY189 THR190 PHE191 THR192 GLN193 GLU194 VAL195 MET196 ILE197 GLN198 ILE199 LYS200 GLU201 LEU202 ALA203 SER204 TYR205 ASN206 ALA207 ILE208 VAL209 LEU210 GLU211 GLU212 CYS213 LYS214 ALA215 LEU216 VAL217 ARG218 CYS219 ASN220 ILE221 LYS222 LEU223 GLU224 LEU225 GLU226 GLN227 ALA228 ASN229 GLU230 ARG231 GLU232 CYS233 GLU234 VAL235 LEU236 ARG237 LYS238 ILE239 TRP240 SER241 SER242 ALA243 GLN244 GLY245 ILE246 GLU247 SER248 MET249 LEU250 LYS251 TYR252 VAL253 GLU254 ASN255
Unit 3 ILE1 THR2 TYR3 ARG4 ASP5 ILE6 VAL7 VAL8 LYS9 LYS10 GLU11 ASP12 GLY13 PHE14 THR15 GLN16 ILE17 VAL18 LEU19 SER20 THR21 ARG22 SER23 THR24 GLU25 LYS26 ASN27 ALA28 LEU29 ASN30 THR31 GLU32 VAL33 ILE34 LYS35 GLU36 MET37 VAL38 ASN39 ALA40 LEU41 ASN42 SER43 ALA44 ALA45 ALA46 ASP47 ASP48 SER49 LYS50 LEU51 VAL52 LEU53 PHE54 SER55 ALA56 ALA57 GLY58 SER59 VAL60 PHE61 CYS62 CYS63 GLY64 LEU65 ASP66 PHE67 GLY68 TYR69 PHE70 VAL71 ARG72 HIS73 LEU74 ARG75 ASN76 ASP77 ARG78 ASN79 THR80 ALA81 SER82 LEU83 GLU84 MET85 VAL86 ASP87 THR88 ILE89 LYS90 ASN91 PHE92 VAL93 ASN94 THR95 PHE96 ILE97 GLN98 PHE99 LYS100 LYS101 PRO102 ILE103 VAL104 VAL105 SER106 VAL107 ASN108 GLY109 PRO110 ALA111 ILE112 GLY113 LEU114 GLY115 ALA116 SER117 ILE118 LEU119 PRO120 LEU121 CYS122 ASP123 LEU124 VAL125 TRP126 ALA127 ASN128 GLU129 LYS130 ALA131 TRP132 PHE133 GLN134 THR135 PRO136 TYR137 THR138 THR139 PHE140 GLY141 GLN142 SER143 PRO144 ASP145 GLY146 CYS147 SER148 SER149 ILE150 THR151 PHE152 PRO153 LYS154 MET155 MET156 GLY157 LYS158 ALA159 SER160 ALA161 ASN162 GLU163 MET164 LEU165 ILE166 ALA167 GLY168 ARG169 LYS170 LEU171 THR172 ALA173 ARG174 GLU175 ALA176 CYS177 ALA178 LYS179 GLY180 LEU181 VAL182 SER183 GLN184 VAL185 PHE186 LEU187 THR188 GLY189 THR190 PHE191 THR192 GLN193 GLU194 VAL195 MET196 ILE197 GLN198 ILE199 LYS200 GLU201 LEU202 ALA203 SER204 TYR205 ASN206 ALA207 ILE208 VAL209 LEU210 GLU211 GLU212 CYS213 LYS214 ALA215 LEU216 VAL217 ARG218 CYS219 ASN220 ILE221 LYS222 LEU223 GLU224 LEU225 GLU226 GLN227 ALA228 ASN229 GLU230 ARG231 GLU232 CYS233 GLU234 VAL235 LEU236 ARG237 LYS238 ILE239 TRP240 SER241 SER242 ALA243 GLN244 GLY245 ILE246 GLU247 SER248 MET249 LEU250 LYS251 TYR252 VAL253 GLU254 ASN255 LYS256
Unit 4 THR2 TYR3 ARG4 ASP5 ILE6 VAL7 VAL8 LYS9 LYS10 GLU11 ASP12 GLY13 PHE14 THR15 GLN16 ILE17 VAL18 LEU19 SER20 THR21 ARG22 SER23 THR24 GLU25 LYS26 ASN27 ALA28 LEU29 ASN30 THR31 GLU32 VAL33 ILE34 LYS35 GLU36 MET37 VAL38 ASN39 ALA40 LEU41 ASN42 SER43 ALA44 ALA45 ALA46 ASP47 ASP48 SER49 LYS50 LEU51 VAL52 LEU53 PHE54 SER55 ALA56 ALA57 GLY58 SER59 VAL60 PHE61 CYS62 CYS63 GLY64 LEU65 ASP66 PHE67 GLY68 TYR69 PHE70 VAL71 ARG72 HIS73 LEU74 ARG75 ASN76 ASP77 ARG78 ASN79 THR80 ALA81 SER82 LEU83 GLU84 MET85 VAL86 ASP87 THR88 ILE89 LYS90 ASN91 PHE92 VAL93 ASN94 THR95 PHE96 ILE97 GLN98 PHE99 LYS100 LYS101 PRO102 ILE103 VAL104 VAL105 SER106 VAL107 ASN108 GLY109 PRO110 ALA111 ILE112 GLY113 LEU114 GLY115 ALA116 SER117 ILE118 LEU119 PRO120 LEU121 CYS122 ASP123 LEU124 VAL125 TRP126 ALA127 ASN128 GLU129 LYS130 ALA131 TRP132 PHE133 GLN134 THR135 PRO136 TYR137 THR138 THR139 PHE140 GLY141 GLN142 SER143 PRO144 ASP145 GLY146 CYS147 SER148 SER149 ILE150 THR151 PHE152 PRO153 LYS154 MET155 MET156 GLY157 LYS158 ALA159 SER160 ALA161 ASN162 GLU163 MET164 LEU165 ILE166 ALA167 GLY168 ARG169 LYS170 LEU171 THR172 ALA173 ARG174 GLU175 ALA176 CYS177 ALA178 LYS179 GLY180 LEU181 VAL182 SER183 GLN184 VAL185 PHE186 LEU187 THR188 GLY189 THR190 PHE191 THR192 GLN193 GLU194 VAL195 MET196 ILE197 GLN198 ILE199 LYS200 GLU201 LEU202 ALA203 SER204 TYR205 ASN206 ALA207 ILE208 VAL209 LEU210 GLU211 GLU212 CYS213 LYS214 ALA215 LEU216 VAL217 ARG218 CYS219 ASN220 ILE221 LYS222 LEU223 GLU224 LEU225 GLU226 GLN227 ALA228 ASN229 GLU230 ARG231 GLU232 CYS233 GLU234 VAL235 LEU236 ARG237 LYS238 ILE239 TRP240 SER241 SER242 ALA243 GLN244 GLY245 ILE246 GLU247 SER248 MET249 LEU250 LYS251 TYR252 VAL253 GLU254 ASN255 LYS256 ILE257 ASP258
Unit 5 THR2 TYR3 ARG4 ASP5 ILE6 VAL7 VAL8 LYS9 LYS10 GLU11 ASP12 GLY13 PHE14 THR15 GLN16 ILE17 VAL18 LEU19 SER20 THR21 ARG22 SER23 THR24 GLU25 LYS26 ASN27 ALA28 LEU29 ASN30 THR31 GLU32 VAL33 ILE34 LYS35 GLU36 MET37 VAL38 ASN39 ALA40 LEU41 ASN42 SER43 ALA44 ALA45 ALA46 ASP47 ASP48 SER49 LYS50 LEU51 VAL52 LEU53 PHE54 SER55 ALA56 ALA57 GLY58 SER59 VAL60 PHE61 CYS62 CYS63 GLY64 LEU65 ASP66 PHE67 GLY68 TYR69 PHE70 VAL71 ARG72 HIS73 LEU74 ARG75 ASN76 ASP77 ARG78 ASN79 THR80 ALA81 SER82 LEU83 GLU84 MET85 VAL86 ASP87 THR88 ILE89 LYS90 ASN91 PHE92 VAL93 ASN94 THR95 PHE96 ILE97 GLN98 PHE99 LYS100 LYS101 PRO102 ILE103 VAL104 VAL105 SER106 VAL107 ASN108 GLY109 PRO110 ALA111 ILE112 GLY113 LEU114 GLY115 ALA116 SER117 ILE118 LEU119 PRO120 LEU121 CYS122 ASP123 LEU124 VAL125 TRP126 ALA127 ASN128 GLU129 LYS130 ALA131 TRP132 PHE133 GLN134 THR135 PRO136 TYR137 THR138 THR139 PHE140 GLY141 GLN142 SER143 PRO144 ASP145 GLY146 CYS147 SER148 SER149 ILE150 THR151 PHE152 PRO153 LYS154 MET155 MET156 GLY157 LYS158 ALA159 SER160 ALA161 ASN162 GLU163 MET164 LEU165 ILE166 ALA167 GLY168 ARG169 LYS170 LEU171 THR172 ALA173 ARG174 GLU175 ALA176 CYS177 ALA178 LYS179 GLY180 LEU181 VAL182 SER183 GLN184 VAL185 PHE186 LEU187 THR188 GLY189 THR190 PHE191 THR192 GLN193 GLU194 VAL195 MET196 ILE197 GLN198 ILE199 LYS200 GLU201 LEU202 ALA203 SER204 TYR205 ASN206 ALA207 ILE208 VAL209 LEU210 GLU211 GLU212 CYS213 LYS214 ALA215 LEU216 VAL217 ARG218 CYS219 ASN220 ILE221 LYS222 LEU223 GLU224 LEU225 GLU226 GLN227 ALA228 ASN229 GLU230 ARG231 GLU232 CYS233 GLU234 VAL235 LEU236 ARG237 LYS238 ILE239 TRP240 SER241 SER242 ALA243 GLN244 GLY245 ILE246 GLU247 SER248 MET249 LEU250 LYS251 TYR252 VAL253 GLU254 ASN255 LYS256 ILE257 ASP258 GLU259 PHE260
Unit 6 ILE1 THR2 TYR3 ARG4 ASP5 ILE6 VAL7 VAL8 LYS9 LYS10 GLU11 ASP12 GLY13 PHE14 THR15 GLN16 ILE17 VAL18 LEU19 SER20 THR21 ARG22 SER23 THR24 GLU25 LYS26 ASN27 ALA28 LEU29 ASN30 THR31 GLU32 VAL33 ILE34 LYS35 GLU36 MET37 VAL38 ASN39 ALA40 LEU41 ASN42 SER43 ALA44 ALA45 ALA46 ASP47 ASP48 SER49 LYS50 LEU51 VAL52 LEU53 PHE54 SER55 ALA56 ALA57 GLY58 SER59 VAL60 PHE61 CYS62 CYS63 GLY64 LEU65 ASP66 PHE67 GLY68 TYR69 PHE70 VAL71 ARG72 HIS73 LEU74 ARG75 ASN76 ASP77 ARG78 ASN79 THR80 ALA81 SER82 LEU83 GLU84 MET85 VAL86 ASP87 THR88 ILE89 LYS90 ASN91 PHE92 VAL93 ASN94 THR95 PHE96 ILE97 GLN98 PHE99 LYS100 LYS101 PRO102 ILE103 VAL104 VAL105 SER106 VAL107 ASN108 GLY109 PRO110 ALA111 ILE112 GLY113 LEU114 GLY115 ALA116 SER117 ILE118 LEU119 PRO120 LEU121 CYS122 ASP123 LEU124 VAL125 TRP126 ALA127 ASN128 GLU129 LYS130 ALA131 TRP132 PHE133 GLN134 THR135 PRO136 TYR137 THR138 THR139 PHE140 GLY141 GLN142 SER143 PRO144 ASP145 GLY146 CYS147 SER148 SER149 ILE150 THR151 PHE152 PRO153 LYS154 MET155 MET156 GLY157 LYS158 ALA159 SER160 ALA161 ASN162 GLU163 MET164 LEU165 ILE166 ALA167 GLY168 ARG169 LYS170 LEU171 THR172 ALA173 ARG174 GLU175 ALA176 CYS177 ALA178 LYS179 GLY180 LEU181 VAL182 SER183 GLN184 VAL185 PHE186 LEU187 THR188 GLY189 THR190 PHE191 THR192 GLN193 GLU194 VAL195 MET196 ILE197 GLN198 ILE199 LYS200 GLU201 LEU202 ALA203 SER204 TYR205 ASN206 ALA207 ILE208 VAL209 LEU210 GLU211 GLU212 CYS213 LYS214 ALA215 LEU216 VAL217 ARG218 CYS219 ASN220 ILE221 LYS222 LEU223 GLU224 LEU225 GLU226 GLN227 ALA228 ASN229 GLU230 ARG231 GLU232 CYS233 GLU234 VAL235 LEU236 ARG237 LYS238 ILE239 TRP240 SER241 SER242 ALA243 GLN244 GLY245 ILE246 GLU247 SER248 MET249 LEU250 LYS251 TYR252 VAL253 GLU254 ASN255 LYS256 ILE257 ASP258 GLU259 PHE260
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany