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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING A SITE
Keywords RNA DUPLEX, RRNA, DECODING SITE, A SITE, HOMO SAPIENS CYTOPLASM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2FQN     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 22 469 0
2  RNA    B 21 449 0
3  Ligand   5'- R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP *UP*CP*GP*C)-3'  A 3 0 15
4  Ligand   5'- R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP *UP*CP*GP*C)-3'  B 2 0 8
5 Water     63 0 63
total       111 918 86

Nucleic acids
Unit 1 U2 G3 C4 G5 U6 C7 G8 C9 U10 C11 C12 G13 G14 A15 A16 A17 A18 G19 U20 C21 G22 C23
Unit 2 G26 C27 G28 U29 C30 G31 C32 U33 C34 C35 G36 G37 A38 A39 A40 A41 G42 U43 C44 G45 C46

Ligands
Unit 3 NCO101 NCO103 MG202
Unit 4 NCO102 MG201

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany