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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE ALZHEIMER'S AMYLOID PRECURSOR PROTEIN (APP) COPPER BINDING DOMAIN IN 'LARGE UNIT CELL' FORM
Keywords ALPHA-BETA TWO-LAYERED SANDWICH, NON-CRYSTALLOGRAPHIC SYMMETRY, METAL BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2FK3     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   AMYLOID BETA A4 PROTEIN PRECURSOR  A 59 475 0
2  Protein   AMYLOID BETA A4 PROTEIN PRECURSOR  B 59 475 0
3  Protein   AMYLOID BETA A4 PROTEIN PRECURSOR  C 59 475 0
4  Protein   AMYLOID BETA A4 PROTEIN PRECURSOR  D 59 475 0
5  Protein   AMYLOID BETA A4 PROTEIN PRECURSOR  E 58 466 0
6  Protein   AMYLOID BETA A4 PROTEIN PRECURSOR  F 59 475 0
7  Protein   AMYLOID BETA A4 PROTEIN PRECURSOR  G 59 475 0
8  Protein   AMYLOID BETA A4 PROTEIN PRECURSOR  H 58 466 0
9  Ligand   AMYLOID BETA A4 PROTEIN PRECURSOR  A 4 0 4
10  Ligand   AMYLOID BETA A4 PROTEIN PRECURSOR  B 2 0 2
11  Ligand   AMYLOID BETA A4 PROTEIN PRECURSOR  C 3 0 3
12  Ligand   AMYLOID BETA A4 PROTEIN PRECURSOR  D 2 0 2
13  Ligand   AMYLOID BETA A4 PROTEIN PRECURSOR  E 3 0 3
14  Ligand   AMYLOID BETA A4 PROTEIN PRECURSOR  F 3 0 3
15  Ligand   AMYLOID BETA A4 PROTEIN PRECURSOR  H 2 0 2
16 Water     189 0 189
total       678 3782 208

Proteins
Unit 1 GLU131 ALA132 CYS133 LYS134 PHE135 LEU136 HIS137 GLN138 GLU139 ARG140 MET141 ASP142 VAL143 CYS144 GLU145 THR146 HIS147 LEU148 HIS149 TRP150 HIS151 THR152 VAL153 ALA154 LYS155 GLU156 THR157 CYS158 SER159 GLU160 LYS161 SER162 THR163 ASN164 LEU165 HIS166 ASP167 TYR168 GLY169 MET170 LEU171 LEU172 PRO173 CYS174 GLY175 ILE176 ASP177 LYS178 PHE179 ARG180 GLY181 VAL182 GLU183 PHE184 VAL185 CYS186 CYS187 PRO188 LEU189
Unit 2 GLU131 ALA132 CYS133 LYS134 PHE135 LEU136 HIS137 GLN138 GLU139 ARG140 MET141 ASP142 VAL143 CYS144 GLU145 THR146 HIS147 LEU148 HIS149 TRP150 HIS151 THR152 VAL153 ALA154 LYS155 GLU156 THR157 CYS158 SER159 GLU160 LYS161 SER162 THR163 ASN164 LEU165 HIS166 ASP167 TYR168 GLY169 MET170 LEU171 LEU172 PRO173 CYS174 GLY175 ILE176 ASP177 LYS178 PHE179 ARG180 GLY181 VAL182 GLU183 PHE184 VAL185 CYS186 CYS187 PRO188 LEU189
Unit 3 GLU131 ALA132 CYS133 LYS134 PHE135 LEU136 HIS137 GLN138 GLU139 ARG140 MET141 ASP142 VAL143 CYS144 GLU145 THR146 HIS147 LEU148 HIS149 TRP150 HIS151 THR152 VAL153 ALA154 LYS155 GLU156 THR157 CYS158 SER159 GLU160 LYS161 SER162 THR163 ASN164 LEU165 HIS166 ASP167 TYR168 GLY169 MET170 LEU171 LEU172 PRO173 CYS174 GLY175 ILE176 ASP177 LYS178 PHE179 ARG180 GLY181 VAL182 GLU183 PHE184 VAL185 CYS186 CYS187 PRO188 LEU189
Unit 4 GLU131 ALA132 CYS133 LYS134 PHE135 LEU136 HIS137 GLN138 GLU139 ARG140 MET141 ASP142 VAL143 CYS144 GLU145 THR146 HIS147 LEU148 HIS149 TRP150 HIS151 THR152 VAL153 ALA154 LYS155 GLU156 THR157 CYS158 SER159 GLU160 LYS161 SER162 THR163 ASN164 LEU165 HIS166 ASP167 TYR168 GLY169 MET170 LEU171 LEU172 PRO173 CYS174 GLY175 ILE176 ASP177 LYS178 PHE179 ARG180 GLY181 VAL182 GLU183 PHE184 VAL185 CYS186 CYS187 PRO188 LEU189
Unit 5 ALA132 CYS133 LYS134 PHE135 LEU136 HIS137 GLN138 GLU139 ARG140 MET141 ASP142 VAL143 CYS144 GLU145 THR146 HIS147 LEU148 HIS149 TRP150 HIS151 THR152 VAL153 ALA154 LYS155 GLU156 THR157 CYS158 SER159 GLU160 LYS161 SER162 THR163 ASN164 LEU165 HIS166 ASP167 TYR168 GLY169 MET170 LEU171 LEU172 PRO173 CYS174 GLY175 ILE176 ASP177 LYS178 PHE179 ARG180 GLY181 VAL182 GLU183 PHE184 VAL185 CYS186 CYS187 PRO188 LEU189
Unit 6 GLU131 ALA132 CYS133 LYS134 PHE135 LEU136 HIS137 GLN138 GLU139 ARG140 MET141 ASP142 VAL143 CYS144 GLU145 THR146 HIS147 LEU148 HIS149 TRP150 HIS151 THR152 VAL153 ALA154 LYS155 GLU156 THR157 CYS158 SER159 GLU160 LYS161 SER162 THR163 ASN164 LEU165 HIS166 ASP167 TYR168 GLY169 MET170 LEU171 LEU172 PRO173 CYS174 GLY175 ILE176 ASP177 LYS178 PHE179 ARG180 GLY181 VAL182 GLU183 PHE184 VAL185 CYS186 CYS187 PRO188 LEU189
Unit 7 GLU131 ALA132 CYS133 LYS134 PHE135 LEU136 HIS137 GLN138 GLU139 ARG140 MET141 ASP142 VAL143 CYS144 GLU145 THR146 HIS147 LEU148 HIS149 TRP150 HIS151 THR152 VAL153 ALA154 LYS155 GLU156 THR157 CYS158 SER159 GLU160 LYS161 SER162 THR163 ASN164 LEU165 HIS166 ASP167 TYR168 GLY169 MET170 LEU171 LEU172 PRO173 CYS174 GLY175 ILE176 ASP177 LYS178 PHE179 ARG180 GLY181 VAL182 GLU183 PHE184 VAL185 CYS186 CYS187 PRO188 LEU189
Unit 8 ALA132 CYS133 LYS134 PHE135 LEU136 HIS137 GLN138 GLU139 ARG140 MET141 ASP142 VAL143 CYS144 GLU145 THR146 HIS147 LEU148 HIS149 TRP150 HIS151 THR152 VAL153 ALA154 LYS155 GLU156 THR157 CYS158 SER159 GLU160 LYS161 SER162 THR163 ASN164 LEU165 HIS166 ASP167 TYR168 GLY169 MET170 LEU171 LEU172 PRO173 CYS174 GLY175 ILE176 ASP177 LYS178 PHE179 ARG180 GLY181 VAL182 GLU183 PHE184 VAL185 CYS186 CYS187 PRO188 LEU189

Ligands
Unit 9 CU204 CU208 CU211 CU213
Unit 10 CU203 CU214
Unit 11 CU201 CU202 CU210
Unit 12 CU215 CU216
Unit 13 CU205 CU212 CU218
Unit 14 CU206 CU217 CU219
Unit 15 CU207 CU209

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany