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Sequence, Chains, Asymmetric and Biological Units

Title 2.9 ANGSTROM X-RAY STRUCTURE OF HYBRID MACROH2A NUCLEOSOMES
Keywords NUCLEOSOME, NCP, MACROH2A, HISTONE VARIANT, CHROMATIN, X- RAY STRUCTURE, CRYSTALLOGRAPHY, STRUCTURAL PROTEIN/DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2F8N     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Other macromolecule   ALPHA-SATELLITE DNA (146 BP)  I 145 2970 0
2  Other macromolecule   ALPHA-SATELLITE DNA (146 BP)  J 145 2969 0
3  Protein   HISTONE H3.1  A 98 807 0
4  Protein   HISTONE H4  B 79 627 0
5  Protein   HISTONE 3, H2BA  D 93 731 0
6  Protein   HISTONE H3.1  E 98 807 0
7  Protein   HISTONE H4  F 84 673 0
8  Protein   HISTONE H2B.1  H 93 729 0
9  Protein   CORE HISTONE MACRO-H2A.1  G 108 823 0
10  Protein   HISTONE H2A TYPE 1  K 105 810 0
11 Water     120 0 120
total       1168 11946 120

Proteins
Unit 3 PRO438 HIS439 ARG440 TYR441 ARG442 PRO443 GLY444 THR445 VAL446 ALA447 LEU448 ARG449 GLU450 ILE451 ARG452 ARG453 TYR454 GLN455 LYS456 SER457 THR458 GLU459 LEU460 LEU461 ILE462 ARG463 LYS464 LEU465 PRO466 PHE467 GLN468 ARG469 LEU470 VAL471 ARG472 GLU473 ILE474 ALA475 GLN476 ASP477 PHE478 LYS479 THR480 ASP481 LEU482 ARG483 PHE484 GLN485 SER486 SER487 ALA488 VAL489 MET490 ALA491 LEU492 GLN493 GLU494 ALA495 SER496 GLU497 ALA498 TYR499 LEU500 VAL501 GLY502 LEU503 PHE504 GLU505 ASP506 THR507 ASN508 LEU509 CYS510 ALA511 ILE512 HIS513 ALA514 LYS515 ARG516 VAL517 THR518 ILE519 MET520 PRO521 LYS522 ASP523 ILE524 GLN525 LEU526 ALA527 ARG528 ARG529 ILE530 ARG531 GLY532 GLU533 ARG534 ALA535
Unit 4 ASP24 ASN25 ILE26 GLN27 GLY28 ILE29 THR30 LYS31 PRO32 ALA33 ILE34 ARG35 ARG36 LEU37 ALA38 ARG39 ARG40 GLY41 GLY42 VAL43 LYS44 ARG45 ILE46 SER47 GLY48 LEU49 ILE50 TYR51 GLU52 GLU53 THR54 ARG55 GLY56 VAL57 LEU58 LYS59 VAL60 PHE61 LEU62 GLU63 ASN64 VAL65 ILE66 ARG67 ASP68 ALA69 VAL70 THR71 TYR72 THR73 GLU74 HIS75 ALA76 LYS77 ARG78 LYS79 THR80 VAL81 THR82 ALA83 MET84 ASP85 VAL86 VAL87 TYR88 ALA89 LEU90 LYS91 ARG92 GLN93 GLY94 ARG95 THR96 LEU97 TYR98 GLY99 PHE100 GLY101 GLY102
Unit 5 ARG1230 LYS1231 GLU1232 SER1233 TYR1234 SER1235 ILE1236 TYR1237 VAL1238 TYR1239 LYS1240 VAL1241 LEU1242 LYS1243 GLN1244 VAL1245 HIS1246 PRO1247 ASP1248 THR1249 GLY1250 ILE1251 SER1252 SER1253 LYS1254 ALA1255 MET1256 GLY1257 ILE1258 MET1259 ASN1260 SER1261 PHE1262 VAL1263 ASN1264 ASP1265 ILE1266 PHE1267 GLU1268 ARG1269 ILE1270 ALA1271 SER1272 GLU1273 ALA1274 SER1275 ARG1276 LEU1277 ALA1278 HIS1279 TYR1280 ASN1281 LYS1282 ARG1283 SER1284 THR1285 ILE1286 THR1287 SER1288 ARG1289 GLU1290 VAL1291 GLN1292 THR1293 ALA1294 VAL1295 ARG1296 LEU1297 LEU1298 LEU1299 PRO1300 GLY1301 GLU1302 LEU1303 ALA1304 LYS1305 HIS1306 ALA1307 VAL1308 SER1309 GLU1310 GLY1311 THR1312 LYS1313 ALA1314 VAL1315 THR1316 LYS1317 TYR1318 THR1319 SER1320 SER1321 LYS1322
Unit 6 PRO638 HIS639 ARG640 TYR641 ARG642 PRO643 GLY644 THR645 VAL646 ALA647 LEU648 ARG649 GLU650 ILE651 ARG652 ARG653 TYR654 GLN655 LYS656 SER657 THR658 GLU659 LEU660 LEU661 ILE662 ARG663 LYS664 LEU665 PRO666 PHE667 GLN668 ARG669 LEU670 VAL671 ARG672 GLU673 ILE674 ALA675 GLN676 ASP677 PHE678 LYS679 THR680 ASP681 LEU682 ARG683 PHE684 GLN685 SER686 SER687 ALA688 VAL689 MET690 ALA691 LEU692 GLN693 GLU694 ALA695 SER696 GLU697 ALA698 TYR699 LEU700 VAL701 GLY702 LEU703 PHE704 GLU705 ASP706 THR707 ASN708 LEU709 CYS710 ALA711 ILE712 HIS713 ALA714 LYS715 ARG716 VAL717 THR718 ILE719 MET720 PRO721 LYS722 ASP723 ILE724 GLN725 LEU726 ALA727 ARG728 ARG729 ILE730 ARG731 GLY732 GLU733 ARG734 ALA735
Unit 7 ARG219 LYS220 VAL221 LEU222 ARG223 ASP224 ASN225 ILE226 GLN227 GLY228 ILE229 THR230 LYS231 PRO232 ALA233 ILE234 ARG235 ARG236 LEU237 ALA238 ARG239 ARG240 GLY241 GLY242 VAL243 LYS244 ARG245 ILE246 SER247 GLY248 LEU249 ILE250 TYR251 GLU252 GLU253 THR254 ARG255 GLY256 VAL257 LEU258 LYS259 VAL260 PHE261 LEU262 GLU263 ASN264 VAL265 ILE266 ARG267 ASP268 ALA269 VAL270 THR271 TYR272 THR273 GLU274 HIS275 ALA276 LYS277 ARG278 LYS279 THR280 VAL281 THR282 ALA283 MET284 ASP285 VAL286 VAL287 TYR288 ALA289 LEU290 LYS291 ARG292 GLN293 GLY294 ARG295 THR296 LEU297 TYR298 GLY299 PHE300 GLY301 GLY302
Unit 8 ARG1430 LYS1431 GLU1432 SER1433 TYR1434 ALA1435 ILE1436 TYR1437 VAL1438 TYR1439 LYS1440 VAL1441 LEU1442 LYS1443 GLN1444 VAL1445 HIS1446 PRO1447 ASP1448 THR1449 GLY1450 ILE1451 SER1452 SER1453 LYS1454 ALA1455 MET1456 SER1457 ILE1458 MET1459 ASN1460 SER1461 PHE1462 VAL1463 ASN1464 ASP1465 VAL1466 PHE1467 GLU1468 ARG1469 ILE1470 ALA1471 GLY1472 GLU1473 ALA1474 SER1475 ARG1476 LEU1477 ALA1478 HIS1479 TYR1480 ASN1481 LYS1482 ARG1483 SER1484 THR1485 ILE1486 THR1487 SER1488 ARG1489 GLU1490 ILE1491 GLN1492 THR1493 ALA1494 VAL1495 ARG1496 LEU1497 LEU1498 LEU1499 PRO1500 GLY1501 GLU1502 LEU1503 ALA1504 LYS1505 HIS1506 ALA1507 VAL1508 SER1509 GLU1510 GLY1511 THR1512 LYS1513 ALA1514 VAL1515 THR1516 LYS1517 TYR1518 THR1519 SER1520 ALA1521 LYS1522
Unit 9 SER1012 THR1013 LYS1014 THR1015 SER1016 ARG1017 SER1018 ALA1019 LYS1020 ALA1021 GLY1022 VAL1023 ILE1024 PHE1025 PRO1026 VAL1027 GLY1028 ARG1029 MET1030 LEU1031 ARG1032 TYR1033 ILE1034 LYS1035 LYS1036 GLY1037 HIS1038 PRO1039 LYS1040 TYR1041 ARG1042 ILE1043 GLY1044 VAL1045 GLY1046 ALA1047 PRO1048 VAL1049 TYR1050 MET1051 ALA1052 ALA1053 VAL1054 LEU1055 GLU1056 TYR1057 LEU1058 THR1059 ALA1060 GLU1061 ILE1062 LEU1063 GLU1064 LEU1065 ALA1066 VAL1067 ASN1068 ALA1069 ALA1070 ARG1071 ASP1072 ASN1073 LYS1074 LYS1075 GLY1076 ARG1077 VAL1078 THR1079 PRO1080 ARG1081 HIS1082 ILE1083 LEU1084 LEU1085 ALA1086 VAL1087 ALA1088 ASN1089 ASP1090 GLU1091 GLU1092 LEU1093 ASN1094 GLN1095 LEU1096 LEU1097 LYS1098 GLY1099 VAL1100 THR1101 ILE1102 ALA1103 SER1104 GLY1105 GLY1106 VAL1107 LEU1108 PRO1109 ASN1110 ILE1111 HIS1112 PRO1113 GLU1114 LEU1115 LEU1116 ALA1117 LYS1118 LYS1119
Unit 10 ALA14 LYS15 THR16 ARG17 SER18 SER19 ARG20 ALA21 GLY22 LEU23 GLN24 PHE25 PRO26 VAL27 GLY28 ARG29 VAL30 HIS31 ARG32 LEU33 LEU34 ARG35 LYS36 GLY37 ASN38 TYR39 SER40 GLU41 ARG42 VAL43 GLY44 ALA45 GLY46 ALA47 PRO48 VAL49 TYR50 LEU51 ALA52 ALA53 VAL54 LEU55 GLU56 TYR57 LEU58 THR59 ALA60 GLU61 ILE62 LEU63 GLU64 LEU65 ALA66 GLY67 ASN68 ALA69 ALA70 ARG71 ASP72 ASN73 LYS74 LYS75 THR76 ARG77 ILE78 ILE79 PRO80 ARG81 HIS82 LEU83 GLN84 LEU85 ALA86 ILE87 ARG88 ASN89 ASP90 GLU91 GLU92 LEU93 ASN94 LYS95 LEU96 LEU97 GLY98 ARG99 VAL100 THR101 ILE102 ALA103 GLN104 GLY105 GLY106 VAL107 LEU108 PRO109 ASN110 ILE111 GLN112 ALA113 VAL114 LEU115 LEU116 PRO117 LYS118

Other macromolecules
Unit 1 DA1 DT2 DC3 DA4 DA5 DT6 DA7 DT8 DC9 DC10 DA11 DC12 DC13 DT14 DG15 DC16 DA17 DG18 DA19 DT20 DT21 DC22 DT23 DA24 DC25 DC26 DA27 DA28 DA29 DA30 DG31 DT32 DG33 DT34 DA35 DT36 DT37 DT38 DG39 DG40 DA41 DA42 DA43 DC44 DT45 DG46 DC47 DT48 DC49 DC50 DA51 DT52 DC53 DA54 DA55 DA56 DA57 DG58 DG59 DC60 DA61 DT62 DG63 DT64 DT65 DC66 DA67 DG68 DC69 DG70 DG71 DA72 DA73 DT74 DC75 DC76 DG77 DC78 DT79 DG80 DA81 DA82 DC83 DA84 DT85 DG86 DC87 DC88 DT89 DT90 DT91 DT92 DG93 DA94 DT95 DG96 DG97 DA98 DG99 DC100 DA101 DG102 DT103 DT104 DT105 DC106 DC107 DA108 DA109 DA110 DT111 DA112 DC113 DA114 DC115 DT116 DT117 DT118 DT119 DG120 DG121 DT122 DA123 DG124 DA125 DA126 DT127 DC128 DT129 DG130 DC131 DA132 DG133 DG134 DT135 DG136 DG137 DA138 DT139 DA140 DT141 DT142 DG143 DA144 DT145
Unit 2 DA146 DT147 DC148 DA149 DA150 DT151 DA152 DT153 DC154 DC155 DA156 DC157 DC158 DT159 DG160 DC161 DA162 DG163 DA164 DT165 DT166 DC167 DT168 DA169 DC170 DC171 DA172 DA173 DA174 DA175 DG176 DT177 DG178 DT179 DA180 DT181 DT182 DT183 DG184 DG185 DA186 DA187 DA188 DC189 DT190 DG191 DC192 DT193 DC194 DC195 DA196 DT197 DC198 DA199 DA200 DA201 DA202 DG203 DG204 DC205 DA206 DT207 DG208 DT209 DT210 DC211 DA212 DG213 DC214 DG215 DG216 DA217 DT218 DT219 DC220 DC221 DG222 DC223 DT224 DG225 DA226 DA227 DC228 DA229 DT230 DG231 DC232 DC233 DT234 DT235 DT236 DT237 DG238 DA239 DT240 DG241 DG242 DA243 DG244 DC245 DA246 DG247 DT248 DT249 DT250 DC251 DC252 DA253 DA254 DA255 DT256 DA257 DC258 DA259 DC260 DT261 DT262 DT263 DT264 DG265 DG266 DT267 DA268 DG269 DA270 DA271 DT272 DC273 DT274 DG275 DC276 DA277 DG278 DG279 DT280 DG281 DG282 DA283 DT284 DA285 DT286 DT287 DG288 DA289 DT290

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany