2EZ8 - Sequence, Chains, Asymmetric and Biological Units

• Title: PYRUVATE OXIDASE VARIANT F479W IN COMPLEX WITH REACTION INTE 2-LACTYL-THIAMIN DIPHOSPHATE
• Keywords: TPP ENZYME, REACTION INTERMEDIATE, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2EZ8	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PYRUVATE OXIDASE	A	585	4523	0
2	Protein	PYRUVATE OXIDASE	B	585	4523	0
3	Ligand	PYRUVATE OXIDASE	A	5	0	93
4	Ligand	PYRUVATE OXIDASE	B	5	0	93
5	Water			993	0	993
total				2173	9046	1179

Proteins

Unit 1

THR 9 ASN 10 ILE 11 LEU 12 ALA 13 GLY 14 ALA 15 ALA 16 VAL 17 ILE 18 LYS 19 VAL 20 LEU 21 GLU 22 ALA 23 TRP 24 GLY 25 VAL 26 ASP 27 HIS 28 LEU 29 TYR 30 GLY 31 ILE 32 PRO 33 GLY 34 GLY 35 SER 36 ILE 37 ASN 38 SER 39 ILE 40 MET 41 ASP 42 ALA 43 LEU 44 SER 45 ALA 46 GLU 47 ARG 48 ASP 49 ARG 50 ILE 51 HIS 52 TYR 53 ILE 54 GLN 55 VAL 56 ARG 57 HIS 58 GLU 59 GLU 60 VAL 61 GLY 62 ALA 63 MET 64 ALA 65 ALA 66 ALA 67 ALA 68 ASP 69 ALA 70 LYS 71 LEU 72 THR 73 GLY 74 LYS 75 ILE 76 GLY 77 VAL 78 CYS 79 PHE 80 GLY 81 SER 82 ALA 83 GLY 84 PRO 85 GLY 86 GLY 87 THR 88 HIS 89 LEU 90 MET 91 ASN 92 GLY 93 LEU 94 TYR 95 ASP 96 ALA 97 ARG 98 GLU 99 ASP 100 HIS 101 VAL 102 PRO 103 VAL 104 LEU 105 ALA 106 LEU 107 ILE 108 GLY 109 GLN 110 PHE 111 GLY 112 THR 113 THR 114 GLY 115 MET 116 ASN 117 MET 118 ASP 119 THR 120 PHE 121 GLN 122 GLU 123 MET 124 ASN 125 GLU 126 ASN 127 PRO 128 ILE 129 TYR 130 ALA 131 ASP 132 VAL 133 ALA 134 ASP 135 TYR 136 ASN 137 VAL 138 THR 139 ALA 140 VAL 141 ASN 142 ALA 143 ALA 144 THR 145 LEU 146 PRO 147 HIS 148 VAL 149 ILE 150 ASP 151 GLU 152 ALA 153 ILE 154 ARG 155 ARG 156 ALA 157 TYR 158 ALA 159 HIS 160 GLN 161 GLY 162 VAL 163 ALA 164 VAL 165 VAL 166 GLN 167 ILE 168 PRO 169 VAL 170 ASP 171 LEU 172 PRO 173 TRP 174 GLN 175 GLN 176 ILE 177 PRO 178 ALA 179 GLU 180 ASP 181 TRP 182 TYR 183 ALA 184 SER 185 ALA 186 ASN 187 SER 188 TYR 189 GLN 190 THR 191 PRO 192 LEU 193 LEU 194 PRO 195 GLU 196 PRO 197 ASP 198 VAL 199 GLN 200 ALA 201 VAL 202 THR 203 ARG 204 LEU 205 THR 206 GLN 207 THR 208 LEU 209 LEU 210 ALA 211 ALA 212 GLU 213 ARG 214 PRO 215 LEU 216 ILE 217 TYR 218 TYR 219 GLY 220 ILE 221 GLY 222 ALA 223 ARG 224 LYS 225 ALA 226 GLY 227 LYS 228 GLU 229 LEU 230 GLU 231 GLN 232 LEU 233 SER 234 LYS 235 THR 236 LEU 237 LYS 238 ILE 239 PRO 240 LEU 241 MET 242 SER 243 THR 244 TYR 245 PRO 246 ALA 247 LYS 248 GLY 249 ILE 250 VAL 251 ALA 252 ASP 253 ARG 254 TYR 255 PRO 256 ALA 257 TYR 258 LEU 259 GLY 260 SER 261 ALA 262 ASN 263 ARG 264 VAL 265 ALA 266 GLN 267 LYS 268 PRO 269 ALA 270 ASN 271 GLU 272 ALA 273 LEU 274 ALA 275 GLN 276 ALA 277 ASP 278 VAL 279 VAL 280 LEU 281 PHE 282 VAL 283 GLY 284 ASN 285 ASN 286 TYR 287 PRO 288 PHE 289 ALA 290 GLU 291 VAL 292 SER 293 LYS 294 ALA 295 PHE 296 LYS 297 ASN 298 THR 299 ARG 300 TYR 301 PHE 302 LEU 303 GLN 304 ILE 305 ASP 306 ILE 307 ASP 308 PRO 309 ALA 310 LYS 311 LEU 312 GLY 313 LYS 314 ARG 315 HIS 316 LYS 317 THR 318 ASP 319 ILE 320 ALA 321 VAL 322 LEU 323 ALA 324 ASP 325 ALA 326 GLN 327 LYS 328 THR 329 LEU 330 ALA 331 ALA 332 ILE 333 LEU 334 ALA 335 GLN 336 VAL 337 SER 338 GLU 339 ARG 340 GLU 341 SER 342 THR 343 PRO 344 TRP 345 TRP 346 GLN 347 ALA 348 ASN 349 LEU 350 ALA 351 ASN 352 VAL 353 LYS 354 ASN 355 TRP 356 ARG 357 ALA 358 TYR 359 LEU 360 ALA 361 SER 362 LEU 363 GLU 364 ASP 365 LYS 366 GLN 367 GLU 368 GLY 369 PRO 370 LEU 371 GLN 372 ALA 373 TYR 374 GLN 375 VAL 376 LEU 377 ARG 378 ALA 379 VAL 380 ASN 381 LYS 382 ILE 383 ALA 384 GLU 385 PRO 386 ASP 387 ALA 388 ILE 389 TYR 390 SER 391 ILE 392 ASP 393 VAL 394 GLY 395 ASP 396 ILE 397 ASN 398 LEU 399 ASN 400 ALA 401 ASN 402 ARG 403 HIS 404 LEU 405 LYS 406 LEU 407 THR 408 PRO 409 SER 410 ASN 411 ARG 412 HIS 413 ILE 414 THR 415 SER 416 ASN 417 LEU 418 PHE 419 ALA 420 THR 421 MET 422 GLY 423 VAL 424 GLY 425 ILE 426 PRO 427 GLY 428 ALA 429 ILE 430 ALA 431 ALA 432 LYS 433 LEU 434 ASN 435 TYR 436 PRO 437 GLU 438 ARG 439 GLN 440 VAL 441 PHE 442 ASN 443 LEU 444 ALA 445 GLY 446 ASP 447 GLY 448 GLY 449 ALA 450 SER 451 MET 452 THR 453 MET 454 GLN 455 ASP 456 LEU 457 ALA 458 THR 459 GLN 460 VAL 461 GLN 462 TYR 463 HIS 464 LEU 465 PRO 466 VAL 467 ILE 468 ASN 469 VAL 470 VAL 471 PHE 472 THR 473 ASN 474 CYS 475 GLN 476 TYR 477 GLY 478 TRP 479 ILE 480 LYS 481 ASP 482 GLU 483 GLN 484 GLU 485 ASP 486 THR 487 ASN 488 GLN 489 ASN 490 ASP 491 PHE 492 ILE 493 GLY 494 VAL 495 GLU 496 PHE 497 ASN 498 ASP 499 ILE 500 ASP 501 PHE 502 SER 503 LYS 504 ILE 505 ALA 506 ASP 507 GLY 508 VAL 509 HIS 510 MET 511 GLN 512 ALA 513 PHE 514 ARG 515 VAL 516 ASN 517 LYS 518 ILE 519 GLU 520 GLN 521 LEU 522 PRO 523 ASP 524 VAL 525 PHE 526 GLU 527 GLN 528 ALA 529 LYS 530 ALA 531 ILE 532 ALA 533 GLN 534 HIS 535 GLU 536 PRO 537 VAL 538 LEU 539 ILE 540 ASP 541 ALA 542 VAL 543 ILE 544 THR 545 GLY 546 ASP 547 ARG 548 PRO 549 LEU 550 PRO 551 ALA 552 GLU 553 LYS 554 LEU 555 ARG 556 LEU 557 ASP 558 SER 559 ALA 560 MET 561 SER 562 SER 563 ALA 564 ALA 565 ASP 566 ILE 567 GLU 568 ALA 569 PHE 570 LYS 571 GLN 572 ARG 573 TYR 574 GLU 575 ALA 576 GLN 577 ASP 578 LEU 579 GLN 580 PRO 581 LEU 582 SER 583 THR 584 TYR 585 LEU 586 LYS 587 GLN 588 PHE 589 GLY 590 LEU 591 ASP 592 ASP 593

Unit 2

THR 9 ASN 10 ILE 11 LEU 12 ALA 13 GLY 14 ALA 15 ALA 16 VAL 17 ILE 18 LYS 19 VAL 20 LEU 21 GLU 22 ALA 23 TRP 24 GLY 25 VAL 26 ASP 27 HIS 28 LEU 29 TYR 30 GLY 31 ILE 32 PRO 33 GLY 34 GLY 35 SER 36 ILE 37 ASN 38 SER 39 ILE 40 MET 41 ASP 42 ALA 43 LEU 44 SER 45 ALA 46 GLU 47 ARG 48 ASP 49 ARG 50 ILE 51 HIS 52 TYR 53 ILE 54 GLN 55 VAL 56 ARG 57 HIS 58 GLU 59 GLU 60 VAL 61 GLY 62 ALA 63 MET 64 ALA 65 ALA 66 ALA 67 ALA 68 ASP 69 ALA 70 LYS 71 LEU 72 THR 73 GLY 74 LYS 75 ILE 76 GLY 77 VAL 78 CYS 79 PHE 80 GLY 81 SER 82 ALA 83 GLY 84 PRO 85 GLY 86 GLY 87 THR 88 HIS 89 LEU 90 MET 91 ASN 92 GLY 93 LEU 94 TYR 95 ASP 96 ALA 97 ARG 98 GLU 99 ASP 100 HIS 101 VAL 102 PRO 103 VAL 104 LEU 105 ALA 106 LEU 107 ILE 108 GLY 109 GLN 110 PHE 111 GLY 112 THR 113 THR 114 GLY 115 MET 116 ASN 117 MET 118 ASP 119 THR 120 PHE 121 GLN 122 GLU 123 MET 124 ASN 125 GLU 126 ASN 127 PRO 128 ILE 129 TYR 130 ALA 131 ASP 132 VAL 133 ALA 134 ASP 135 TYR 136 ASN 137 VAL 138 THR 139 ALA 140 VAL 141 ASN 142 ALA 143 ALA 144 THR 145 LEU 146 PRO 147 HIS 148 VAL 149 ILE 150 ASP 151 GLU 152 ALA 153 ILE 154 ARG 155 ARG 156 ALA 157 TYR 158 ALA 159 HIS 160 GLN 161 GLY 162 VAL 163 ALA 164 VAL 165 VAL 166 GLN 167 ILE 168 PRO 169 VAL 170 ASP 171 LEU 172 PRO 173 TRP 174 GLN 175 GLN 176 ILE 177 PRO 178 ALA 179 GLU 180 ASP 181 TRP 182 TYR 183 ALA 184 SER 185 ALA 186 ASN 187 SER 188 TYR 189 GLN 190 THR 191 PRO 192 LEU 193 LEU 194 PRO 195 GLU 196 PRO 197 ASP 198 VAL 199 GLN 200 ALA 201 VAL 202 THR 203 ARG 204 LEU 205 THR 206 GLN 207 THR 208 LEU 209 LEU 210 ALA 211 ALA 212 GLU 213 ARG 214 PRO 215 LEU 216 ILE 217 TYR 218 TYR 219 GLY 220 ILE 221 GLY 222 ALA 223 ARG 224 LYS 225 ALA 226 GLY 227 LYS 228 GLU 229 LEU 230 GLU 231 GLN 232 LEU 233 SER 234 LYS 235 THR 236 LEU 237 LYS 238 ILE 239 PRO 240 LEU 241 MET 242 SER 243 THR 244 TYR 245 PRO 246 ALA 247 LYS 248 GLY 249 ILE 250 VAL 251 ALA 252 ASP 253 ARG 254 TYR 255 PRO 256 ALA 257 TYR 258 LEU 259 GLY 260 SER 261 ALA 262 ASN 263 ARG 264 VAL 265 ALA 266 GLN 267 LYS 268 PRO 269 ALA 270 ASN 271 GLU 272 ALA 273 LEU 274 ALA 275 GLN 276 ALA 277 ASP 278 VAL 279 VAL 280 LEU 281 PHE 282 VAL 283 GLY 284 ASN 285 ASN 286 TYR 287 PRO 288 PHE 289 ALA 290 GLU 291 VAL 292 SER 293 LYS 294 ALA 295 PHE 296 LYS 297 ASN 298 THR 299 ARG 300 TYR 301 PHE 302 LEU 303 GLN 304 ILE 305 ASP 306 ILE 307 ASP 308 PRO 309 ALA 310 LYS 311 LEU 312 GLY 313 LYS 314 ARG 315 HIS 316 LYS 317 THR 318 ASP 319 ILE 320 ALA 321 VAL 322 LEU 323 ALA 324 ASP 325 ALA 326 GLN 327 LYS 328 THR 329 LEU 330 ALA 331 ALA 332 ILE 333 LEU 334 ALA 335 GLN 336 VAL 337 SER 338 GLU 339 ARG 340 GLU 341 SER 342 THR 343 PRO 344 TRP 345 TRP 346 GLN 347 ALA 348 ASN 349 LEU 350 ALA 351 ASN 352 VAL 353 LYS 354 ASN 355 TRP 356 ARG 357 ALA 358 TYR 359 LEU 360 ALA 361 SER 362 LEU 363 GLU 364 ASP 365 LYS 366 GLN 367 GLU 368 GLY 369 PRO 370 LEU 371 GLN 372 ALA 373 TYR 374 GLN 375 VAL 376 LEU 377 ARG 378 ALA 379 VAL 380 ASN 381 LYS 382 ILE 383 ALA 384 GLU 385 PRO 386 ASP 387 ALA 388 ILE 389 TYR 390 SER 391 ILE 392 ASP 393 VAL 394 GLY 395 ASP 396 ILE 397 ASN 398 LEU 399 ASN 400 ALA 401 ASN 402 ARG 403 HIS 404 LEU 405 LYS 406 LEU 407 THR 408 PRO 409 SER 410 ASN 411 ARG 412 HIS 413 ILE 414 THR 415 SER 416 ASN 417 LEU 418 PHE 419 ALA 420 THR 421 MET 422 GLY 423 VAL 424 GLY 425 ILE 426 PRO 427 GLY 428 ALA 429 ILE 430 ALA 431 ALA 432 LYS 433 LEU 434 ASN 435 TYR 436 PRO 437 GLU 438 ARG 439 GLN 440 VAL 441 PHE 442 ASN 443 LEU 444 ALA 445 GLY 446 ASP 447 GLY 448 GLY 449 ALA 450 SER 451 MET 452 THR 453 MET 454 GLN 455 ASP 456 LEU 457 ALA 458 THR 459 GLN 460 VAL 461 GLN 462 TYR 463 HIS 464 LEU 465 PRO 466 VAL 467 ILE 468 ASN 469 VAL 470 VAL 471 PHE 472 THR 473 ASN 474 CYS 475 GLN 476 TYR 477 GLY 478 TRP 479 ILE 480 LYS 481 ASP 482 GLU 483 GLN 484 GLU 485 ASP 486 THR 487 ASN 488 GLN 489 ASN 490 ASP 491 PHE 492 ILE 493 GLY 494 VAL 495 GLU 496 PHE 497 ASN 498 ASP 499 ILE 500 ASP 501 PHE 502 SER 503 LYS 504 ILE 505 ALA 506 ASP 507 GLY 508 VAL 509 HIS 510 MET 511 GLN 512 ALA 513 PHE 514 ARG 515 VAL 516 ASN 517 LYS 518 ILE 519 GLU 520 GLN 521 LEU 522 PRO 523 ASP 524 VAL 525 PHE 526 GLU 527 GLN 528 ALA 529 LYS 530 ALA 531 ILE 532 ALA 533 GLN 534 HIS 535 GLU 536 PRO 537 VAL 538 LEU 539 ILE 540 ASP 541 ALA 542 VAL 543 ILE 544 THR 545 GLY 546 ASP 547 ARG 548 PRO 549 LEU 550 PRO 551 ALA 552 GLU 553 LYS 554 LEU 555 ARG 556 LEU 557 ASP 558 SER 559 ALA 560 MET 561 SER 562 SER 563 ALA 564 ALA 565 ASP 566 ILE 567 GLU 568 ALA 569 PHE 570 LYS 571 GLN 572 ARG 573 TYR 574 GLU 575 ALA 576 GLN 577 ASP 578 LEU 579 GLN 580 PRO 581 LEU 582 SER 583 THR 584 TYR 585 LEU 586 LYS 587 GLN 588 PHE 589 GLY 590 LEU 591 ASP 592 ASP 593

Ligands

Unit 3	MG 1510 NA 1513 TDL 1611 FAD 1614 PYR 1615
Unit 4	NA 1511 MG 1512 TDL 1616 FAD 1617 PYR 1618