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Sequence, Chains, Asymmetric and Biological Units

Title COMPLEX BETWEEN KANAMYCIN A AND THE 16S-RRNA A SITE.
Keywords RNA-AMINOGLYCOSIDE INTERACTIONS, A SITE, UOU PAIRS, AA BULGES
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2ESI     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 23 486 0
2  RNA    B 21 446 0
3  Ligand   5'- R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP *UP*CP*GP*C)-3'  A 2 0 66
4  Ligand   5'- R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP *UP*CP*GP*C)-3'  B 1 0 33
5 Water     34 0 34
total       81 932 133
Nucleic acids
Unit 1 U0 U1 G2 C3 G4 U5 C6 A7 C8 A9 C10 C11 G12 G13 U14 G15 A16 A17 G18 U19 C20 G21 C22
Unit 2 G25 C26 G27 U28 C29 A30 C31 A32 C33 C34 G35 G36 U37 G38 A39 A40 G41 U42 C43 G44 C45
Ligands
Unit 3 KAN50 KAN51
Unit 4 KAN52
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany