2EJ6 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL ANALYSIS OF DELTA1-PYRROLINE-5-CARBOXYLATE DEHYDROGE THERMUS THERMOPHILUS WITH BOUND D-PROLINE
• Keywords: ENZYME-INHIBITOR COMPLEX, STRUCTURAL GENOMICS, NPPSFA, NATIO PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKE STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, OXIDOREDUC
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2EJ6	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE	A	516	4038	0
2	Protein	1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE	B	516	4038	0
3	Ligand	1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE	A	9	0	57
4	Ligand	1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE	B	9	0	65
5	Water			546	0	546
total				1596	8076	668

Proteins

Unit 1

MET 1 THR 2 VAL 3 GLU 4 PRO 5 PHE 6 ARG 7 ASN 8 GLU 9 PRO 10 ILE 11 GLU 12 THR 13 PHE 14 GLN 15 THR 16 GLU 17 GLU 18 ALA 19 ARG 20 ARG 21 ALA 22 MET 23 ARG 24 GLU 25 ALA 26 LEU 27 ARG 28 ARG 29 VAL 30 ARG 31 GLU 32 GLU 33 PHE 34 GLY 35 ARG 36 HIS 37 TYR 38 PRO 39 LEU 40 TYR 41 ILE 42 GLY 43 GLY 44 GLU 45 TRP 46 VAL 47 ASP 48 THR 49 LYS 50 GLU 51 ARG 52 MET 53 VAL 54 SER 55 LEU 56 ASN 57 PRO 58 SER 59 ALA 60 PRO 61 SER 62 GLU 63 VAL 64 VAL 65 GLY 66 THR 67 THR 68 ALA 69 LYS 70 ALA 71 GLY 72 LYS 73 ALA 74 GLU 75 ALA 76 GLU 77 ALA 78 ALA 79 LEU 80 GLU 81 ALA 82 ALA 83 TRP 84 LYS 85 ALA 86 PHE 87 LYS 88 THR 89 TRP 90 LYS 91 ASP 92 TRP 93 PRO 94 GLN 95 GLU 96 ASP 97 ARG 98 SER 99 ARG 100 LEU 101 LEU 102 LEU 103 LYS 104 ALA 105 ALA 106 ALA 107 LEU 108 MET 109 ARG 110 ARG 111 ARG 112 LYS 113 ARG 114 GLU 115 LEU 116 GLU 117 ALA 118 THR 119 LEU 120 VAL 121 TYR 122 GLU 123 VAL 124 GLY 125 LYS 126 ASN 127 TRP 128 VAL 129 GLU 130 ALA 131 SER 132 ALA 133 ASP 134 VAL 135 ALA 136 GLU 137 ALA 138 ILE 139 ASP 140 PHE 141 ILE 142 GLU 143 TYR 144 TYR 145 ALA 146 ARG 147 ALA 148 ALA 149 LEU 150 ARG 151 TYR 152 ARG 153 TYR 154 PRO 155 ALA 156 VAL 157 GLU 158 VAL 159 VAL 160 PRO 161 TYR 162 PRO 163 GLY 164 GLU 165 ASP 166 ASN 167 GLU 168 SER 169 PHE 170 TYR 171 VAL 172 PRO 173 LEU 174 GLY 175 ALA 176 GLY 177 VAL 178 VAL 179 ILE 180 ALA 181 PRO 182 TRP 183 ASN 184 PHE 185 PRO 186 VAL 187 ALA 188 ILE 189 PHE 190 THR 191 GLY 192 MET 193 ILE 194 VAL 195 GLY 196 PRO 197 VAL 198 ALA 199 VAL 200 GLY 201 ASN 202 THR 203 VAL 204 ILE 205 ALA 206 LYS 207 PRO 208 ALA 209 GLU 210 ASP 211 ALA 212 VAL 213 VAL 214 VAL 215 GLY 216 ALA 217 LYS 218 VAL 219 PHE 220 GLU 221 ILE 222 PHE 223 HIS 224 GLU 225 ALA 226 GLY 227 PHE 228 PRO 229 PRO 230 GLY 231 VAL 232 VAL 233 ASN 234 PHE 235 LEU 236 PRO 237 GLY 238 VAL 239 GLY 240 GLU 241 GLU 242 VAL 243 GLY 244 ALA 245 TYR 246 LEU 247 VAL 248 GLU 249 HIS 250 PRO 251 ARG 252 ILE 253 ARG 254 PHE 255 ILE 256 ASN 257 PHE 258 THR 259 GLY 260 SER 261 LEU 262 GLU 263 VAL 264 GLY 265 LEU 266 LYS 267 ILE 268 TYR 269 GLU 270 ALA 271 ALA 272 GLY 273 ARG 274 LEU 275 ALA 276 PRO 277 GLY 278 GLN 279 THR 280 TRP 281 PHE 282 LYS 283 ARG 284 ALA 285 TYR 286 VAL 287 GLU 288 THR 289 GLY 290 GLY 291 LYS 292 ASP 293 ALA 294 ILE 295 ILE 296 VAL 297 ASP 298 GLU 299 THR 300 ALA 301 ASP 302 PHE 303 ASP 304 LEU 305 ALA 306 ALA 307 GLU 308 GLY 309 VAL 310 VAL 311 VAL 312 SER 313 ALA 314 TYR 315 GLY 316 PHE 317 GLN 318 GLY 319 GLN 320 LYS 321 CYS 322 SER 323 ALA 324 ALA 325 SER 326 ARG 327 LEU 328 ILE 329 LEU 330 THR 331 GLN 332 GLY 333 ALA 334 TYR 335 GLU 336 PRO 337 VAL 338 LEU 339 GLU 340 ARG 341 VAL 342 LEU 343 LYS 344 ARG 345 ALA 346 GLU 347 ARG 348 LEU 349 SER 350 VAL 351 GLY 352 PRO 353 ALA 354 GLU 355 GLU 356 ASN 357 PRO 358 ASP 359 LEU 360 GLY 361 PRO 362 VAL 363 VAL 364 SER 365 ALA 366 GLU 367 GLN 368 GLU 369 ARG 370 LYS 371 VAL 372 LEU 373 SER 374 TYR 375 ILE 376 GLU 377 ILE 378 GLY 379 LYS 380 ASN 381 GLU 382 GLY 383 GLN 384 LEU 385 VAL 386 LEU 387 GLY 388 GLY 389 LYS 390 ARG 391 LEU 392 GLU 393 GLY 394 GLU 395 GLY 396 TYR 397 PHE 398 ILE 399 ALA 400 PRO 401 THR 402 VAL 403 PHE 404 THR 405 GLU 406 VAL 407 PRO 408 PRO 409 LYS 410 ALA 411 ARG 412 ILE 413 ALA 414 GLN 415 GLU 416 GLU 417 ILE 418 PHE 419 GLY 420 PRO 421 VAL 422 LEU 423 SER 424 VAL 425 ILE 426 ARG 427 VAL 428 LYS 429 ASP 430 PHE 431 ALA 432 GLU 433 ALA 434 LEU 435 GLU 436 VAL 437 ALA 438 ASN 439 ASP 440 THR 441 PRO 442 TYR 443 GLY 444 LEU 445 THR 446 GLY 447 GLY 448 VAL 449 TYR 450 SER 451 ARG 452 LYS 453 ARG 454 GLU 455 HIS 456 LEU 457 GLU 458 TRP 459 ALA 460 ARG 461 ARG 462 GLU 463 PHE 464 HIS 465 VAL 466 GLY 467 ASN 468 LEU 469 TYR 470 PHE 471 ASN 472 ARG 473 LYS 474 ILE 475 THR 476 GLY 477 ALA 478 LEU 479 VAL 480 GLY 481 VAL 482 GLN 483 PRO 484 PHE 485 GLY 486 GLY 487 PHE 488 LYS 489 LEU 490 SER 491 GLY 492 THR 493 ASN 494 ALA 495 LYS 496 THR 497 GLY 498 ALA 499 LEU 500 ASP 501 TYR 502 LEU 503 ARG 504 LEU 505 PHE 506 LEU 507 GLU 508 MET 509 LYS 510 ALA 511 VAL 512 ALA 513 GLU 514 ARG 515 PHE 516

Unit 2

MET 1 THR 2 VAL 3 GLU 4 PRO 5 PHE 6 ARG 7 ASN 8 GLU 9 PRO 10 ILE 11 GLU 12 THR 13 PHE 14 GLN 15 THR 16 GLU 17 GLU 18 ALA 19 ARG 20 ARG 21 ALA 22 MET 23 ARG 24 GLU 25 ALA 26 LEU 27 ARG 28 ARG 29 VAL 30 ARG 31 GLU 32 GLU 33 PHE 34 GLY 35 ARG 36 HIS 37 TYR 38 PRO 39 LEU 40 TYR 41 ILE 42 GLY 43 GLY 44 GLU 45 TRP 46 VAL 47 ASP 48 THR 49 LYS 50 GLU 51 ARG 52 MET 53 VAL 54 SER 55 LEU 56 ASN 57 PRO 58 SER 59 ALA 60 PRO 61 SER 62 GLU 63 VAL 64 VAL 65 GLY 66 THR 67 THR 68 ALA 69 LYS 70 ALA 71 GLY 72 LYS 73 ALA 74 GLU 75 ALA 76 GLU 77 ALA 78 ALA 79 LEU 80 GLU 81 ALA 82 ALA 83 TRP 84 LYS 85 ALA 86 PHE 87 LYS 88 THR 89 TRP 90 LYS 91 ASP 92 TRP 93 PRO 94 GLN 95 GLU 96 ASP 97 ARG 98 SER 99 ARG 100 LEU 101 LEU 102 LEU 103 LYS 104 ALA 105 ALA 106 ALA 107 LEU 108 MET 109 ARG 110 ARG 111 ARG 112 LYS 113 ARG 114 GLU 115 LEU 116 GLU 117 ALA 118 THR 119 LEU 120 VAL 121 TYR 122 GLU 123 VAL 124 GLY 125 LYS 126 ASN 127 TRP 128 VAL 129 GLU 130 ALA 131 SER 132 ALA 133 ASP 134 VAL 135 ALA 136 GLU 137 ALA 138 ILE 139 ASP 140 PHE 141 ILE 142 GLU 143 TYR 144 TYR 145 ALA 146 ARG 147 ALA 148 ALA 149 LEU 150 ARG 151 TYR 152 ARG 153 TYR 154 PRO 155 ALA 156 VAL 157 GLU 158 VAL 159 VAL 160 PRO 161 TYR 162 PRO 163 GLY 164 GLU 165 ASP 166 ASN 167 GLU 168 SER 169 PHE 170 TYR 171 VAL 172 PRO 173 LEU 174 GLY 175 ALA 176 GLY 177 VAL 178 VAL 179 ILE 180 ALA 181 PRO 182 TRP 183 ASN 184 PHE 185 PRO 186 VAL 187 ALA 188 ILE 189 PHE 190 THR 191 GLY 192 MET 193 ILE 194 VAL 195 GLY 196 PRO 197 VAL 198 ALA 199 VAL 200 GLY 201 ASN 202 THR 203 VAL 204 ILE 205 ALA 206 LYS 207 PRO 208 ALA 209 GLU 210 ASP 211 ALA 212 VAL 213 VAL 214 VAL 215 GLY 216 ALA 217 LYS 218 VAL 219 PHE 220 GLU 221 ILE 222 PHE 223 HIS 224 GLU 225 ALA 226 GLY 227 PHE 228 PRO 229 PRO 230 GLY 231 VAL 232 VAL 233 ASN 234 PHE 235 LEU 236 PRO 237 GLY 238 VAL 239 GLY 240 GLU 241 GLU 242 VAL 243 GLY 244 ALA 245 TYR 246 LEU 247 VAL 248 GLU 249 HIS 250 PRO 251 ARG 252 ILE 253 ARG 254 PHE 255 ILE 256 ASN 257 PHE 258 THR 259 GLY 260 SER 261 LEU 262 GLU 263 VAL 264 GLY 265 LEU 266 LYS 267 ILE 268 TYR 269 GLU 270 ALA 271 ALA 272 GLY 273 ARG 274 LEU 275 ALA 276 PRO 277 GLY 278 GLN 279 THR 280 TRP 281 PHE 282 LYS 283 ARG 284 ALA 285 TYR 286 VAL 287 GLU 288 THR 289 GLY 290 GLY 291 LYS 292 ASP 293 ALA 294 ILE 295 ILE 296 VAL 297 ASP 298 GLU 299 THR 300 ALA 301 ASP 302 PHE 303 ASP 304 LEU 305 ALA 306 ALA 307 GLU 308 GLY 309 VAL 310 VAL 311 VAL 312 SER 313 ALA 314 TYR 315 GLY 316 PHE 317 GLN 318 GLY 319 GLN 320 LYS 321 CYS 322 SER 323 ALA 324 ALA 325 SER 326 ARG 327 LEU 328 ILE 329 LEU 330 THR 331 GLN 332 GLY 333 ALA 334 TYR 335 GLU 336 PRO 337 VAL 338 LEU 339 GLU 340 ARG 341 VAL 342 LEU 343 LYS 344 ARG 345 ALA 346 GLU 347 ARG 348 LEU 349 SER 350 VAL 351 GLY 352 PRO 353 ALA 354 GLU 355 GLU 356 ASN 357 PRO 358 ASP 359 LEU 360 GLY 361 PRO 362 VAL 363 VAL 364 SER 365 ALA 366 GLU 367 GLN 368 GLU 369 ARG 370 LYS 371 VAL 372 LEU 373 SER 374 TYR 375 ILE 376 GLU 377 ILE 378 GLY 379 LYS 380 ASN 381 GLU 382 GLY 383 GLN 384 LEU 385 VAL 386 LEU 387 GLY 388 GLY 389 LYS 390 ARG 391 LEU 392 GLU 393 GLY 394 GLU 395 GLY 396 TYR 397 PHE 398 ILE 399 ALA 400 PRO 401 THR 402 VAL 403 PHE 404 THR 405 GLU 406 VAL 407 PRO 408 PRO 409 LYS 410 ALA 411 ARG 412 ILE 413 ALA 414 GLN 415 GLU 416 GLU 417 ILE 418 PHE 419 GLY 420 PRO 421 VAL 422 LEU 423 SER 424 VAL 425 ILE 426 ARG 427 VAL 428 LYS 429 ASP 430 PHE 431 ALA 432 GLU 433 ALA 434 LEU 435 GLU 436 VAL 437 ALA 438 ASN 439 ASP 440 THR 441 PRO 442 TYR 443 GLY 444 LEU 445 THR 446 GLY 447 GLY 448 VAL 449 TYR 450 SER 451 ARG 452 LYS 453 ARG 454 GLU 455 HIS 456 LEU 457 GLU 458 TRP 459 ALA 460 ARG 461 ARG 462 GLU 463 PHE 464 HIS 465 VAL 466 GLY 467 ASN 468 LEU 469 TYR 470 PHE 471 ASN 472 ARG 473 LYS 474 ILE 475 THR 476 GLY 477 ALA 478 LEU 479 VAL 480 GLY 481 VAL 482 GLN 483 PRO 484 PHE 485 GLY 486 GLY 487 PHE 488 LYS 489 LEU 490 SER 491 GLY 492 THR 493 ASN 494 ALA 495 LYS 496 THR 497 GLY 498 ALA 499 LEU 500 ASP 501 TYR 502 LEU 503 ARG 504 LEU 505 PHE 506 LEU 507 GLU 508 MET 509 LYS 510 ALA 511 VAL 512 ALA 513 GLU 514 ARG 515 PHE 516

Ligands

Unit 3	DPR 1517 ACT 1520 MPD 1530 MPD 1531 MPD 1532 MPD 1536 NA 1540 ACT 5520 MPD 5531
Unit 4	MPD 1534 DPR 5517 MPD 5530 MPD 5532 MPD 5534 MPD 5535 MPD 5536 MPD 5537 NA 5540