2E8Z - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF PULLULANASE TYPE I FROM BACILLUS SUBTIL 168 COMPLEXED WITH ALPHA-CYCLODEXTRIN
• Keywords: MULTIPLE DOMAIN, BETA-ALPHA-BARREL, ALPHA-AMYLASE-FAMILY, AL CYCLODEXTRIN, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2E8Z	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	AMYX PROTEIN	A	712	5672	0
2	Protein	AMYX PROTEIN	B	712	5672	0
3	Ligand		C	6	0	66
4	Ligand		D	6	0	66
5	Ligand	AMYX PROTEIN	A	3	0	11
6	Ligand	AMYX PROTEIN	B	3	0	11
7	Water			667	0	667
total				2109	11344	821

Proteins

Unit 1

MET 1 VAL 2 SER 3 ILE 4 ARG 5 ARG 6 SER 7 PHE 8 GLU 9 ALA 10 TYR 11 VAL 12 ASP 13 ASP 14 MET 15 ASN 16 ILE 17 ILE 18 THR 19 VAL 20 LEU 21 ILE 22 PRO 23 ALA 24 GLU 25 GLN 26 LYS 27 GLU 28 ILE 29 MET 30 THR 31 PRO 32 PRO 33 PHE 34 ARG 35 LEU 36 GLU 37 THR 38 GLU 39 ILE 40 THR 41 ASP 42 PHE 43 PRO 44 LEU 45 ALA 46 VAL 47 ARG 48 GLU 49 GLU 50 TYR 51 SER 52 LEU 53 GLU 54 ALA 55 LYS 56 TYR 57 LYS 58 TYR 59 VAL 60 CYS 61 VAL 62 SER 63 ASP 64 HIS 65 PRO 66 VAL 67 THR 68 PHE 69 GLY 70 LYS 71 ILE 72 HIS 73 CYS 74 VAL 75 ARG 76 ALA 77 SER 78 SER 79 GLY 80 HIS 81 LYS 82 THR 83 ASP 84 LEU 85 GLN 86 ILE 87 GLY 88 ALA 89 VAL 90 ILE 91 ARG 92 THR 93 ALA 94 ALA 95 PHE 96 ASP 97 ASP 98 GLU 99 PHE 100 TYR 101 TYR 102 ASP 103 GLY 104 GLU 105 LEU 106 GLY 107 ALA 108 VAL 109 TYR 110 THR 111 ALA 112 ASP 113 HIS 114 THR 115 VAL 116 PHE 117 LYS 118 VAL 119 TRP 120 ALA 121 PRO 122 ALA 123 ALA 124 THR 125 SER 126 ALA 127 ALA 128 VAL 129 LYS 130 LEU 131 SER 132 HIS 133 PRO 134 ASN 135 LYS 136 SER 137 GLY 138 ARG 139 THR 140 PHE 141 GLN 142 MET 143 THR 144 ARG 145 LEU 146 GLU 147 LYS 148 GLY 149 VAL 150 TYR 151 ALA 152 VAL 153 THR 154 VAL 155 THR 156 GLY 157 ASP 158 LEU 159 HIS 160 GLY 161 TYR 162 GLU 163 TYR 164 LEU 165 PHE 166 CYS 167 ILE 168 CYS 169 ASN 170 ASN 171 SER 172 GLU 173 TRP 174 MET 175 GLU 176 THR 177 VAL 178 ASP 179 GLN 180 TYR 181 ALA 182 LYS 183 ALA 184 VAL 185 THR 186 VAL 187 ASN 188 GLY 189 GLU 190 LYS 191 GLY 192 VAL 193 VAL 194 LEU 195 ARG 196 PRO 197 ASP 198 GLN 199 MET 200 LYS 201 TRP 202 THR 203 ALA 204 PRO 205 LEU 206 LYS 207 PRO 208 PHE 209 SER 210 HIS 211 PRO 212 VAL 213 ASP 214 ALA 215 VAL 216 ILE 217 TYR 218 GLU 219 THR 220 HIS 221 LEU 222 ARG 223 ASP 224 PHE 225 SER 226 ILE 227 HIS 228 GLU 229 ASN 230 SER 231 GLY 232 MET 233 ILE 234 ASN 235 LYS 236 GLY 237 LYS 238 TYR 239 LEU 240 ALA 241 LEU 242 THR 243 GLU 244 THR 245 ASP 246 THR 247 GLN 248 THR 249 ALA 250 ASN 251 GLY 252 SER 253 SER 254 SER 255 GLY 256 LEU 257 ALA 258 TYR 259 VAL 260 LYS 261 GLU 262 LEU 263 GLY 264 VAL 265 THR 266 HIS 267 VAL 268 GLU 269 LEU 270 LEU 271 PRO 272 VAL 273 ASN 274 ASP 275 PHE 276 ALA 277 GLY 278 VAL 279 ASP 280 GLU 281 GLU 282 LYS 283 PRO 284 LEU 285 ASP 286 ALA 287 TYR 288 ASN 289 TRP 290 GLY 291 TYR 292 ASN 293 PRO 294 LEU 295 HIS 296 PHE 297 PHE 298 ALA 299 PRO 300 GLU 301 GLY 302 SER 303 TYR 304 ALA 305 SER 306 ASN 307 PRO 308 HIS 309 ASP 310 PRO 311 GLN 312 THR 313 ARG 314 LYS 315 THR 316 GLU 317 LEU 318 LYS 319 GLN 320 MET 321 ILE 322 ASN 323 THR 324 LEU 325 HIS 326 GLN 327 HIS 328 GLY 329 LEU 330 ARG 331 VAL 332 ILE 333 LEU 334 ASP 335 VAL 336 VAL 337 PHE 338 ASN 339 HIS 340 VAL 341 TYR 342 LYS 343 ARG 344 GLU 345 ASN 346 SER 347 PRO 348 PHE 349 GLU 350 LYS 351 THR 352 VAL 353 PRO 354 GLY 355 TYR 356 PHE 357 PHE 358 ARG 359 HIS 360 ASP 361 GLU 362 CYS 363 GLY 364 LYS 365 PRO 366 SER 367 ASN 368 GLY 369 THR 370 GLY 371 VAL 372 GLY 373 ASN 374 ASP 375 ILE 376 ALA 377 SER 378 GLU 379 ARG 380 ARG 381 MET 382 ALA 383 ARG 384 LYS 385 PHE 386 ILE 387 ALA 388 ASP 389 CYS 390 VAL 391 VAL 392 TYR 393 TRP 394 LEU 395 GLU 396 GLU 397 TYR 398 ASN 399 VAL 400 ASP 401 GLY 402 PHE 403 ARG 404 PHE 405 ASP 406 LEU 407 LEU 408 GLY 409 ILE 410 LEU 411 ASP 412 ILE 413 ASP 414 THR 415 VAL 416 LEU 417 TYR 418 MET 419 LYS 420 GLU 421 LYS 422 ALA 423 THR 424 LYS 425 ALA 426 LYS 427 PRO 428 GLY 429 ILE 430 LEU 431 LEU 432 PHE 433 GLY 434 GLU 435 GLY 436 TRP 437 ASP 438 LEU 439 ALA 440 THR 441 PRO 442 LEU 443 PRO 444 HIS 445 GLU 446 GLN 447 LYS 448 ALA 449 ALA 450 LEU 451 ALA 452 ASN 453 ALA 454 PRO 455 ARG 456 MET 457 PRO 458 GLY 459 ILE 460 GLY 461 PHE 462 PHE 463 ASN 464 ASP 465 MET 466 PHE 467 ARG 468 ASP 469 ALA 470 VAL 471 LYS 472 GLY 473 ASN 474 THR 475 PHE 476 HIS 477 LEU 478 LYS 479 ALA 480 THR 481 GLY 482 PHE 483 ALA 484 LEU 485 GLY 486 ASN 487 GLY 488 GLU 489 SER 490 ALA 491 GLN 492 ALA 493 VAL 494 MET 495 HIS 496 GLY 497 ILE 498 ALA 499 GLY 500 SER 501 SER 502 GLY 503 TRP 504 LYS 505 ALA 506 LEU 507 ALA 508 PRO 509 ILE 510 VAL 511 PRO 512 GLU 513 PRO 514 SER 515 GLN 516 SER 517 ILE 518 ASN 519 TYR 520 VAL 521 GLU 522 SER 523 HIS 524 ASP 525 ASN 526 HIS 527 THR 528 PHE 529 TRP 530 ASP 531 LYS 532 MET 533 SER 534 PHE 535 ALA 536 LEU 537 PRO 538 GLN 539 GLU 540 ASN 541 ASP 542 SER 543 ARG 544 LYS 545 ARG 546 SER 547 ARG 548 GLN 549 ARG 550 LEU 551 ALA 552 VAL 553 ALA 554 ILE 555 ILE 556 LEU 557 LEU 558 ALA 559 GLN 560 GLY 561 VAL 562 PRO 563 PHE 564 ILE 565 HIS 566 SER 567 GLY 568 GLN 569 GLU 570 PHE 571 PHE 572 ARG 573 THR 574 LYS 575 GLN 576 GLY 577 VAL 578 GLU 579 ASN 580 SER 581 TYR 582 GLN 583 SER 584 SER 585 ASP 586 SER 587 ILE 588 ASN 589 GLN 590 LEU 591 ASP 592 TRP 593 ASP 594 ARG 595 ARG 596 GLU 597 THR 598 PHE 599 LYS 600 GLU 601 ASP 602 VAL 603 HIS 604 TYR 605 ILE 606 ARG 607 ARG 608 LEU 609 ILE 610 SER 611 LEU 612 ARG 613 LYS 614 ALA 615 HIS 616 PRO 617 ALA 618 PHE 619 ARG 620 LEU 621 ARG 622 SER 623 ALA 624 ALA 625 ASP 626 ILE 627 GLN 628 ARG 629 HIS 630 LEU 631 GLU 632 CYS 633 LEU 634 THR 635 LEU 636 LYS 637 GLU 638 HIS 639 LEU 640 ILE 641 ALA 642 TYR 643 ARG 644 LEU 645 TYR 646 ASP 647 LEU 648 ASP 649 GLU 650 VAL 651 ASP 652 GLU 653 TRP 654 LYS 655 ASP 656 ILE 657 ILE 658 VAL 659 ILE 660 HIS 661 HIS 662 ALA 663 SER 664 PRO 665 ASP 666 SER 667 VAL 668 GLU 669 TRP 670 ARG 671 LEU 672 PRO 673 ASN 674 ASP 675 ILE 676 PRO 677 TYR 678 ARG 679 LEU 680 LEU 681 CYS 682 ASP 683 PRO 684 SER 685 GLY 686 PHE 687 GLN 688 GLU 689 ASP 690 PRO 691 THR 692 GLU 693 ILE 694 LYS 695 LYS 696 THR 697 VAL 698 ALA 699 VAL 700 ASN 701 GLY 702 ILE 703 GLY 704 THR 705 VAL 706 ILE 707 LEU 708 TYR 709 LEU 710 ALA 711 SER 712

Unit 2

MET 1 VAL 2 SER 3 ILE 4 ARG 5 ARG 6 SER 7 PHE 8 GLU 9 ALA 10 TYR 11 VAL 12 ASP 13 ASP 14 MET 15 ASN 16 ILE 17 ILE 18 THR 19 VAL 20 LEU 21 ILE 22 PRO 23 ALA 24 GLU 25 GLN 26 LYS 27 GLU 28 ILE 29 MET 30 THR 31 PRO 32 PRO 33 PHE 34 ARG 35 LEU 36 GLU 37 THR 38 GLU 39 ILE 40 THR 41 ASP 42 PHE 43 PRO 44 LEU 45 ALA 46 VAL 47 ARG 48 GLU 49 GLU 50 TYR 51 SER 52 LEU 53 GLU 54 ALA 55 LYS 56 TYR 57 LYS 58 TYR 59 VAL 60 CYS 61 VAL 62 SER 63 ASP 64 HIS 65 PRO 66 VAL 67 THR 68 PHE 69 GLY 70 LYS 71 ILE 72 HIS 73 CYS 74 VAL 75 ARG 76 ALA 77 SER 78 SER 79 GLY 80 HIS 81 LYS 82 THR 83 ASP 84 LEU 85 GLN 86 ILE 87 GLY 88 ALA 89 VAL 90 ILE 91 ARG 92 THR 93 ALA 94 ALA 95 PHE 96 ASP 97 ASP 98 GLU 99 PHE 100 TYR 101 TYR 102 ASP 103 GLY 104 GLU 105 LEU 106 GLY 107 ALA 108 VAL 109 TYR 110 THR 111 ALA 112 ASP 113 HIS 114 THR 115 VAL 116 PHE 117 LYS 118 VAL 119 TRP 120 ALA 121 PRO 122 ALA 123 ALA 124 THR 125 SER 126 ALA 127 ALA 128 VAL 129 LYS 130 LEU 131 SER 132 HIS 133 PRO 134 ASN 135 LYS 136 SER 137 GLY 138 ARG 139 THR 140 PHE 141 GLN 142 MET 143 THR 144 ARG 145 LEU 146 GLU 147 LYS 148 GLY 149 VAL 150 TYR 151 ALA 152 VAL 153 THR 154 VAL 155 THR 156 GLY 157 ASP 158 LEU 159 HIS 160 GLY 161 TYR 162 GLU 163 TYR 164 LEU 165 PHE 166 CYS 167 ILE 168 CYS 169 ASN 170 ASN 171 SER 172 GLU 173 TRP 174 MET 175 GLU 176 THR 177 VAL 178 ASP 179 GLN 180 TYR 181 ALA 182 LYS 183 ALA 184 VAL 185 THR 186 VAL 187 ASN 188 GLY 189 GLU 190 LYS 191 GLY 192 VAL 193 VAL 194 LEU 195 ARG 196 PRO 197 ASP 198 GLN 199 MET 200 LYS 201 TRP 202 THR 203 ALA 204 PRO 205 LEU 206 LYS 207 PRO 208 PHE 209 SER 210 HIS 211 PRO 212 VAL 213 ASP 214 ALA 215 VAL 216 ILE 217 TYR 218 GLU 219 THR 220 HIS 221 LEU 222 ARG 223 ASP 224 PHE 225 SER 226 ILE 227 HIS 228 GLU 229 ASN 230 SER 231 GLY 232 MET 233 ILE 234 ASN 235 LYS 236 GLY 237 LYS 238 TYR 239 LEU 240 ALA 241 LEU 242 THR 243 GLU 244 THR 245 ASP 246 THR 247 GLN 248 THR 249 ALA 250 ASN 251 GLY 252 SER 253 SER 254 SER 255 GLY 256 LEU 257 ALA 258 TYR 259 VAL 260 LYS 261 GLU 262 LEU 263 GLY 264 VAL 265 THR 266 HIS 267 VAL 268 GLU 269 LEU 270 LEU 271 PRO 272 VAL 273 ASN 274 ASP 275 PHE 276 ALA 277 GLY 278 VAL 279 ASP 280 GLU 281 GLU 282 LYS 283 PRO 284 LEU 285 ASP 286 ALA 287 TYR 288 ASN 289 TRP 290 GLY 291 TYR 292 ASN 293 PRO 294 LEU 295 HIS 296 PHE 297 PHE 298 ALA 299 PRO 300 GLU 301 GLY 302 SER 303 TYR 304 ALA 305 SER 306 ASN 307 PRO 308 HIS 309 ASP 310 PRO 311 GLN 312 THR 313 ARG 314 LYS 315 THR 316 GLU 317 LEU 318 LYS 319 GLN 320 MET 321 ILE 322 ASN 323 THR 324 LEU 325 HIS 326 GLN 327 HIS 328 GLY 329 LEU 330 ARG 331 VAL 332 ILE 333 LEU 334 ASP 335 VAL 336 VAL 337 PHE 338 ASN 339 HIS 340 VAL 341 TYR 342 LYS 343 ARG 344 GLU 345 ASN 346 SER 347 PRO 348 PHE 349 GLU 350 LYS 351 THR 352 VAL 353 PRO 354 GLY 355 TYR 356 PHE 357 PHE 358 ARG 359 HIS 360 ASP 361 GLU 362 CYS 363 GLY 364 LYS 365 PRO 366 SER 367 ASN 368 GLY 369 THR 370 GLY 371 VAL 372 GLY 373 ASN 374 ASP 375 ILE 376 ALA 377 SER 378 GLU 379 ARG 380 ARG 381 MET 382 ALA 383 ARG 384 LYS 385 PHE 386 ILE 387 ALA 388 ASP 389 CYS 390 VAL 391 VAL 392 TYR 393 TRP 394 LEU 395 GLU 396 GLU 397 TYR 398 ASN 399 VAL 400 ASP 401 GLY 402 PHE 403 ARG 404 PHE 405 ASP 406 LEU 407 LEU 408 GLY 409 ILE 410 LEU 411 ASP 412 ILE 413 ASP 414 THR 415 VAL 416 LEU 417 TYR 418 MET 419 LYS 420 GLU 421 LYS 422 ALA 423 THR 424 LYS 425 ALA 426 LYS 427 PRO 428 GLY 429 ILE 430 LEU 431 LEU 432 PHE 433 GLY 434 GLU 435 GLY 436 TRP 437 ASP 438 LEU 439 ALA 440 THR 441 PRO 442 LEU 443 PRO 444 HIS 445 GLU 446 GLN 447 LYS 448 ALA 449 ALA 450 LEU 451 ALA 452 ASN 453 ALA 454 PRO 455 ARG 456 MET 457 PRO 458 GLY 459 ILE 460 GLY 461 PHE 462 PHE 463 ASN 464 ASP 465 MET 466 PHE 467 ARG 468 ASP 469 ALA 470 VAL 471 LYS 472 GLY 473 ASN 474 THR 475 PHE 476 HIS 477 LEU 478 LYS 479 ALA 480 THR 481 GLY 482 PHE 483 ALA 484 LEU 485 GLY 486 ASN 487 GLY 488 GLU 489 SER 490 ALA 491 GLN 492 ALA 493 VAL 494 MET 495 HIS 496 GLY 497 ILE 498 ALA 499 GLY 500 SER 501 SER 502 GLY 503 TRP 504 LYS 505 ALA 506 LEU 507 ALA 508 PRO 509 ILE 510 VAL 511 PRO 512 GLU 513 PRO 514 SER 515 GLN 516 SER 517 ILE 518 ASN 519 TYR 520 VAL 521 GLU 522 SER 523 HIS 524 ASP 525 ASN 526 HIS 527 THR 528 PHE 529 TRP 530 ASP 531 LYS 532 MET 533 SER 534 PHE 535 ALA 536 LEU 537 PRO 538 GLN 539 GLU 540 ASN 541 ASP 542 SER 543 ARG 544 LYS 545 ARG 546 SER 547 ARG 548 GLN 549 ARG 550 LEU 551 ALA 552 VAL 553 ALA 554 ILE 555 ILE 556 LEU 557 LEU 558 ALA 559 GLN 560 GLY 561 VAL 562 PRO 563 PHE 564 ILE 565 HIS 566 SER 567 GLY 568 GLN 569 GLU 570 PHE 571 PHE 572 ARG 573 THR 574 LYS 575 GLN 576 GLY 577 VAL 578 GLU 579 ASN 580 SER 581 TYR 582 GLN 583 SER 584 SER 585 ASP 586 SER 587 ILE 588 ASN 589 GLN 590 LEU 591 ASP 592 TRP 593 ASP 594 ARG 595 ARG 596 GLU 597 THR 598 PHE 599 LYS 600 GLU 601 ASP 602 VAL 603 HIS 604 TYR 605 ILE 606 ARG 607 ARG 608 LEU 609 ILE 610 SER 611 LEU 612 ARG 613 LYS 614 ALA 615 HIS 616 PRO 617 ALA 618 PHE 619 ARG 620 LEU 621 ARG 622 SER 623 ALA 624 ALA 625 ASP 626 ILE 627 GLN 628 ARG 629 HIS 630 LEU 631 GLU 632 CYS 633 LEU 634 THR 635 LEU 636 LYS 637 GLU 638 HIS 639 LEU 640 ILE 641 ALA 642 TYR 643 ARG 644 LEU 645 TYR 646 ASP 647 LEU 648 ASP 649 GLU 650 VAL 651 ASP 652 GLU 653 TRP 654 LYS 655 ASP 656 ILE 657 ILE 658 VAL 659 ILE 660 HIS 661 HIS 662 ALA 663 SER 664 PRO 665 ASP 666 SER 667 VAL 668 GLU 669 TRP 670 ARG 671 LEU 672 PRO 673 ASN 674 ASP 675 ILE 676 PRO 677 TYR 678 ARG 679 LEU 680 LEU 681 CYS 682 ASP 683 PRO 684 SER 685 GLY 686 PHE 687 GLN 688 GLU 689 ASP 690 PRO 691 THR 692 GLU 693 ILE 694 LYS 695 LYS 696 THR 697 VAL 698 ALA 699 VAL 700 ASN 701 GLY 702 ILE 703 GLY 704 THR 705 VAL 706 ILE 707 LEU 708 TYR 709 LEU 710 ALA 711 SER 712

Ligands

Unit 3	GLC 1 GLC 2 GLC 3 GLC 4 GLC 5 GLC 6
Unit 4	GLC 1 GLC 2 GLC 3 GLC 4 GLC 5 GLC 6
Unit 5	CA 741 ACT 751 GOL 761
Unit 6	CA 742 ACT 752 GOL 762