2E89 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS TILS IN A COMPLEX WITH MAGNESIUM ION, AND L-LYSINE
• Keywords: ROSSMANN-FOLD, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURA GENOMICS/PROTEOMICS INITIATIVE, RSGI, LIGASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2E89	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	TRNA(ILE)-LYSIDINE SYNTHASE	A	317	2630	0
2	Protein	TRNA(ILE)-LYSIDINE SYNTHASE	B	314	2606	0
3	Protein	TRNA(ILE)-LYSIDINE SYNTHASE	C	314	2606	0
4	Protein	TRNA(ILE)-LYSIDINE SYNTHASE	D	313	2600	0
5	Ligand	TRNA(ILE)-LYSIDINE SYNTHASE	A	1	0	31
6	Protein	TRNA(ILE)-LYSIDINE SYNTHASE	B	2	0	41
7	Ligand	TRNA(ILE)-LYSIDINE SYNTHASE	C	2	0	32
8	Ligand	TRNA(ILE)-LYSIDINE SYNTHASE	D	1	0	31
9	Water			65	0	65
total				1329	10442	200

Proteins

Unit 1	MET 1 ASN 2 PRO 3 GLU 4 SER 5 ARG 6 VAL 7 ILE 8 ARG 9 LYS 10 VAL 11 LEU 12 ALA 13 LEU 14 GLN 15 ASN 16 ASP 17 GLU 18 LYS 19 ILE 20 PHE 21 SER 22 GLY 23 GLU 24 ARG 25 ARG 26 VAL 27 LEU 28 ILE 29 ALA 30 PHE 31 SER 32 GLY 33 GLY 34 VAL 35 ASP 36 SER 37 VAL 38 VAL 39 LEU 40 THR 41 ASP 42 VAL 43 LEU 44 LEU 45 LYS 46 LEU 47 LYS 48 ASN 49 TYR 50 PHE 51 SER 52 LEU 53 LYS 54 GLU 55 VAL 56 ALA 57 LEU 58 ALA 59 HIS 60 PHE 61 ASN 62 HIS 63 MET 64 LEU 65 ARG 66 GLU 67 SER 68 ALA 69 GLU 70 ARG 71 ASP 72 GLU 73 GLU 74 PHE 75 CYS 76 LYS 77 GLU 78 PHE 79 ALA 80 LYS 81 GLU 82 ARG 83 ASN 84 MET 85 LYS 86 ILE 87 PHE 88 VAL 89 GLY 90 LYS 91 GLU 92 ASP 93 VAL 94 ARG 95 ALA 96 PHE 97 ALA 98 LYS 99 GLU 100 ASN 101 ARG 102 MET 103 SER 104 LEU 105 GLU 106 GLU 107 ALA 108 GLY 109 ARG 110 PHE 111 LEU 112 ARG 113 TYR 114 LYS 115 PHE 116 LEU 117 LYS 118 GLU 119 ILE 120 LEU 121 GLU 122 SER 123 GLU 124 GLY 125 PHE 126 ASP 127 CYS 128 ILE 129 ALA 130 THR 131 ALA 132 HIS 133 HIS 134 LEU 135 ASN 136 ASP 137 LEU 138 LEU 139 GLU 140 THR 141 SER 142 LEU 143 LEU 144 PHE 145 PHE 146 THR 147 ARG 148 GLY 149 THR 150 GLY 151 LEU 152 ASP 153 GLY 154 LEU 155 ILE 156 GLY 157 PHE 158 LEU 159 PRO 160 LYS 161 GLU 162 GLU 163 VAL 164 ILE 165 ARG 166 ARG 167 PRO 168 LEU 169 TYR 170 TYR 171 VAL 172 LYS 173 ARG 174 SER 175 GLU 176 ILE 177 GLU 178 GLU 179 TYR 180 ALA 181 LYS 182 PHE 183 LYS 184 GLY 185 LEU 186 ARG 187 TRP 188 VAL 189 GLU 190 ASP 191 GLU 192 THR 193 ASN 194 TYR 195 GLU 196 VAL 197 SER 198 ILE 199 PRO 200 ARG 201 ASN 202 ARG 203 ILE 204 ARG 205 HIS 206 ARG 207 VAL 208 ILE 209 PRO 210 GLU 211 LEU 212 LYS 213 ARG 214 ILE 215 ASN 216 GLU 217 ASN 218 LEU 219 GLU 220 ASP 221 THR 222 PHE 223 LEU 224 LYS 225 MET 226 VAL 227 LYS 228 VAL 229 LEU 230 ARG 231 ALA 232 GLU 233 ARG 234 GLU 235 PHE 236 LEU 237 GLU 238 GLU 239 GLU 240 ALA 241 GLN 242 LYS 243 LEU 244 TYR 245 LYS 246 GLU 247 VAL 248 LYS 249 LYS 250 GLY 251 ASN 252 CYS 253 LEU 254 ASP 255 VAL 256 LYS 257 LYS 258 LEU 259 LYS 260 GLU 261 LYS 262 PRO 263 LEU 264 ALA 265 LEU 266 GLN 267 ARG 268 ARG 269 VAL 270 ILE 271 ARG 272 LYS 273 PHE 274 ILE 275 GLY 276 GLU 277 LYS 278 ASP 279 TYR 280 GLU 281 LYS 282 VAL 283 GLU 284 LEU 285 VAL 286 ARG 287 SER 288 LEU 289 LEU 290 GLU 291 LYS 292 GLY 293 GLY 294 GLU 295 VAL 296 ASN 297 LEU 298 GLY 299 LYS 300 GLY 301 LYS 302 VAL 303 LEU 304 LYS 305 ARG 306 LYS 307 GLU 308 ARG 309 TRP 310 LEU 311 CYS 312 PHE 313 SER 314 PRO 315 GLU 316 VAL 317
Unit 2	MET 1 ASN 2 PRO 3 GLU 4 SER 5 ARG 6 VAL 7 ILE 8 ARG 9 LYS 10 VAL 11 LEU 12 ALA 13 LEU 14 GLN 15 ASN 16 ASP 17 GLU 18 LYS 19 ILE 20 PHE 21 SER 22 GLY 23 GLU 24 ARG 25 ARG 26 VAL 27 LEU 28 ILE 29 ALA 30 PHE 31 SER 32 GLY 33 GLY 34 VAL 35 ASP 36 SER 37 VAL 38 VAL 39 LEU 40 THR 41 ASP 42 VAL 43 LEU 44 LEU 45 LYS 46 LEU 47 LYS 48 ASN 49 TYR 50 PHE 51 SER 52 LEU 53 LYS 54 GLU 55 VAL 56 ALA 57 LEU 58 ALA 59 HIS 60 PHE 61 ASN 62 HIS 63 MET 64 LEU 65 ARG 66 GLU 67 SER 68 ALA 69 GLU 70 ARG 71 ASP 72 GLU 73 GLU 74 PHE 75 CYS 76 LYS 77 GLU 78 PHE 79 ALA 80 LYS 81 GLU 82 ARG 83 ASN 84 MET 85 LYS 86 ILE 87 PHE 88 VAL 89 GLY 90 LYS 91 GLU 92 ASP 93 VAL 94 ARG 95 ALA 96 PHE 97 ALA 98 LYS 99 GLU 100 ASN 101 ARG 102 MET 103 SER 104 LEU 105 GLU 106 GLU 107 ALA 108 GLY 109 ARG 110 PHE 111 LEU 112 ARG 113 TYR 114 LYS 115 PHE 116 LEU 117 LYS 118 GLU 119 ILE 120 LEU 121 GLU 122 SER 123 GLU 124 GLY 125 PHE 126 ASP 127 CYS 128 ILE 129 ALA 130 THR 131 ALA 132 HIS 133 HIS 134 LEU 135 ASN 136 ASP 137 LEU 138 LEU 139 GLU 140 THR 141 SER 142 LEU 143 LEU 144 PHE 145 PHE 146 THR 147 ARG 148 GLY 149 THR 150 GLY 151 LEU 152 ASP 153 GLY 154 LEU 155 ILE 156 GLY 157 PHE 158 LEU 159 PRO 160 LYS 161 GLU 162 GLU 163 VAL 164 ILE 165 ARG 166 ARG 167 PRO 168 LEU 169 TYR 170 TYR 171 VAL 172 LYS 173 ARG 174 SER 175 GLU 176 ILE 177 GLU 178 GLU 179 TYR 180 ALA 181 LYS 182 PHE 183 LYS 184 GLY 185 LEU 186 ARG 187 TRP 188 VAL 189 GLU 190 ASP 191 GLU 192 THR 193 ASN 194 TYR 195 GLU 196 VAL 197 SER 198 ILE 199 PRO 200 ARG 201 ASN 202 ARG 203 ILE 204 ARG 205 HIS 206 ARG 207 VAL 208 ILE 209 PRO 210 GLU 211 LEU 212 LYS 213 ARG 214 ILE 215 ASN 216 GLU 217 ASN 218 LEU 219 GLU 220 ASP 221 THR 222 PHE 223 LEU 224 LYS 225 MET 226 VAL 227 LYS 228 VAL 229 LEU 230 ARG 231 ALA 232 GLU 233 ARG 234 GLU 235 PHE 236 LEU 237 GLU 238 GLU 239 GLU 240 ALA 241 GLN 242 LYS 243 LEU 244 TYR 245 LYS 246 GLU 247 VAL 248 LYS 249 LYS 250 GLY 251 ASN 252 CYS 253 LEU 254 ASP 255 VAL 256 LYS 257 LYS 258 LEU 259 LYS 260 GLU 261 LYS 262 PRO 263 LEU 264 ALA 265 LEU 266 GLN 267 ARG 268 ARG 269 VAL 270 ILE 271 ARG 272 LYS 273 PHE 274 ILE 275 GLY 276 GLU 277 LYS 278 ASP 279 TYR 280 GLU 281 LYS 282 VAL 283 GLU 284 LEU 285 VAL 286 ARG 287 SER 288 LEU 289 LEU 290 GLU 291 LYS 292 GLY 293 GLY 294 GLU 295 VAL 296 ASN 297 LEU 298 GLY 299 LYS 300 GLY 301 LYS 302 VAL 303 LEU 304 LYS 305 ARG 306 LYS 307 GLU 308 ARG 309 TRP 310 LEU 311 CYS 312 PHE 313 SER 314
Unit 3	MET 1 ASN 2 PRO 3 GLU 4 SER 5 ARG 6 VAL 7 ILE 8 ARG 9 LYS 10 VAL 11 LEU 12 ALA 13 LEU 14 GLN 15 ASN 16 ASP 17 GLU 18 LYS 19 ILE 20 PHE 21 SER 22 GLY 23 GLU 24 ARG 25 ARG 26 VAL 27 LEU 28 ILE 29 ALA 30 PHE 31 SER 32 GLY 33 GLY 34 VAL 35 ASP 36 SER 37 VAL 38 VAL 39 LEU 40 THR 41 ASP 42 VAL 43 LEU 44 LEU 45 LYS 46 LEU 47 LYS 48 ASN 49 TYR 50 PHE 51 SER 52 LEU 53 LYS 54 GLU 55 VAL 56 ALA 57 LEU 58 ALA 59 HIS 60 PHE 61 ASN 62 HIS 63 MET 64 LEU 65 ARG 66 GLU 67 SER 68 ALA 69 GLU 70 ARG 71 ASP 72 GLU 73 GLU 74 PHE 75 CYS 76 LYS 77 GLU 78 PHE 79 ALA 80 LYS 81 GLU 82 ARG 83 ASN 84 MET 85 LYS 86 ILE 87 PHE 88 VAL 89 GLY 90 LYS 91 GLU 92 ASP 93 VAL 94 ARG 95 ALA 96 PHE 97 ALA 98 LYS 99 GLU 100 ASN 101 ARG 102 MET 103 SER 104 LEU 105 GLU 106 GLU 107 ALA 108 GLY 109 ARG 110 PHE 111 LEU 112 ARG 113 TYR 114 LYS 115 PHE 116 LEU 117 LYS 118 GLU 119 ILE 120 LEU 121 GLU 122 SER 123 GLU 124 GLY 125 PHE 126 ASP 127 CYS 128 ILE 129 ALA 130 THR 131 ALA 132 HIS 133 HIS 134 LEU 135 ASN 136 ASP 137 LEU 138 LEU 139 GLU 140 THR 141 SER 142 LEU 143 LEU 144 PHE 145 PHE 146 THR 147 ARG 148 GLY 149 THR 150 GLY 151 LEU 152 ASP 153 GLY 154 LEU 155 ILE 156 GLY 157 PHE 158 LEU 159 PRO 160 LYS 161 GLU 162 GLU 163 VAL 164 ILE 165 ARG 166 ARG 167 PRO 168 LEU 169 TYR 170 TYR 171 VAL 172 LYS 173 ARG 174 SER 175 GLU 176 ILE 177 GLU 178 GLU 179 TYR 180 ALA 181 LYS 182 PHE 183 LYS 184 GLY 185 LEU 186 ARG 187 TRP 188 VAL 189 GLU 190 ASP 191 GLU 192 THR 193 ASN 194 TYR 195 GLU 196 VAL 197 SER 198 ILE 199 PRO 200 ARG 201 ASN 202 ARG 203 ILE 204 ARG 205 HIS 206 ARG 207 VAL 208 ILE 209 PRO 210 GLU 211 LEU 212 LYS 213 ARG 214 ILE 215 ASN 216 GLU 217 ASN 218 LEU 219 GLU 220 ASP 221 THR 222 PHE 223 LEU 224 LYS 225 MET 226 VAL 227 LYS 228 VAL 229 LEU 230 ARG 231 ALA 232 GLU 233 ARG 234 GLU 235 PHE 236 LEU 237 GLU 238 GLU 239 GLU 240 ALA 241 GLN 242 LYS 243 LEU 244 TYR 245 LYS 246 GLU 247 VAL 248 LYS 249 LYS 250 GLY 251 ASN 252 CYS 253 LEU 254 ASP 255 VAL 256 LYS 257 LYS 258 LEU 259 LYS 260 GLU 261 LYS 262 PRO 263 LEU 264 ALA 265 LEU 266 GLN 267 ARG 268 ARG 269 VAL 270 ILE 271 ARG 272 LYS 273 PHE 274 ILE 275 GLY 276 GLU 277 LYS 278 ASP 279 TYR 280 GLU 281 LYS 282 VAL 283 GLU 284 LEU 285 VAL 286 ARG 287 SER 288 LEU 289 LEU 290 GLU 291 LYS 292 GLY 293 GLY 294 GLU 295 VAL 296 ASN 297 LEU 298 GLY 299 LYS 300 GLY 301 LYS 302 VAL 303 LEU 304 LYS 305 ARG 306 LYS 307 GLU 308 ARG 309 TRP 310 LEU 311 CYS 312 PHE 313 SER 314
Unit 4	MET 1 ASN 2 PRO 3 GLU 4 SER 5 ARG 6 VAL 7 ILE 8 ARG 9 LYS 10 VAL 11 LEU 12 ALA 13 LEU 14 GLN 15 ASN 16 ASP 17 GLU 18 LYS 19 ILE 20 PHE 21 SER 22 GLY 23 GLU 24 ARG 25 ARG 26 VAL 27 LEU 28 ILE 29 ALA 30 PHE 31 SER 32 GLY 33 GLY 34 VAL 35 ASP 36 SER 37 VAL 38 VAL 39 LEU 40 THR 41 ASP 42 VAL 43 LEU 44 LEU 45 LYS 46 LEU 47 LYS 48 ASN 49 TYR 50 PHE 51 SER 52 LEU 53 LYS 54 GLU 55 VAL 56 ALA 57 LEU 58 ALA 59 HIS 60 PHE 61 ASN 62 HIS 63 MET 64 LEU 65 ARG 66 GLU 67 SER 68 ALA 69 GLU 70 ARG 71 ASP 72 GLU 73 GLU 74 PHE 75 CYS 76 LYS 77 GLU 78 PHE 79 ALA 80 LYS 81 GLU 82 ARG 83 ASN 84 MET 85 LYS 86 ILE 87 PHE 88 VAL 89 GLY 90 LYS 91 GLU 92 ASP 93 VAL 94 ARG 95 ALA 96 PHE 97 ALA 98 LYS 99 GLU 100 ASN 101 ARG 102 MET 103 SER 104 LEU 105 GLU 106 GLU 107 ALA 108 GLY 109 ARG 110 PHE 111 LEU 112 ARG 113 TYR 114 LYS 115 PHE 116 LEU 117 LYS 118 GLU 119 ILE 120 LEU 121 GLU 122 SER 123 GLU 124 GLY 125 PHE 126 ASP 127 CYS 128 ILE 129 ALA 130 THR 131 ALA 132 HIS 133 HIS 134 LEU 135 ASN 136 ASP 137 LEU 138 LEU 139 GLU 140 THR 141 SER 142 LEU 143 LEU 144 PHE 145 PHE 146 THR 147 ARG 148 GLY 149 THR 150 GLY 151 LEU 152 ASP 153 GLY 154 LEU 155 ILE 156 GLY 157 PHE 158 LEU 159 PRO 160 LYS 161 GLU 162 GLU 163 VAL 164 ILE 165 ARG 166 ARG 167 PRO 168 LEU 169 TYR 170 TYR 171 VAL 172 LYS 173 ARG 174 SER 175 GLU 176 ILE 177 GLU 178 GLU 179 TYR 180 ALA 181 LYS 182 PHE 183 LYS 184 GLY 185 LEU 186 ARG 187 TRP 188 VAL 189 GLU 190 ASP 191 GLU 192 THR 193 ASN 194 TYR 195 GLU 196 VAL 197 SER 198 ILE 199 PRO 200 ARG 201 ASN 202 ARG 203 ILE 204 ARG 205 HIS 206 ARG 207 VAL 208 ILE 209 PRO 210 GLU 211 LEU 212 LYS 213 ARG 214 ILE 215 ASN 216 GLU 217 ASN 218 LEU 219 GLU 220 ASP 221 THR 222 PHE 223 LEU 224 LYS 225 MET 226 VAL 227 LYS 228 VAL 229 LEU 230 ARG 231 ALA 232 GLU 233 ARG 234 GLU 235 PHE 236 LEU 237 GLU 238 GLU 239 GLU 240 ALA 241 GLN 242 LYS 243 LEU 244 TYR 245 LYS 246 GLU 247 VAL 248 LYS 249 LYS 250 GLY 251 ASN 252 CYS 253 LEU 254 ASP 255 VAL 256 LYS 257 LYS 258 LEU 259 LYS 260 GLU 261 LYS 262 PRO 263 LEU 264 ALA 265 LEU 266 GLN 267 ARG 268 ARG 269 VAL 270 ILE 271 ARG 272 LYS 273 PHE 274 ILE 275 GLY 276 GLU 277 LYS 278 ASP 279 TYR 280 GLU 281 LYS 282 VAL 283 GLU 284 LEU 285 VAL 286 ARG 287 SER 288 LEU 289 LEU 290 GLU 291 LYS 292 GLY 293 GLY 294 GLU 295 VAL 296 ASN 297 LEU 298 GLY 299 LYS 300 GLY 301 LYS 302 VAL 303 LEU 304 LYS 305 ARG 306 LYS 307 GLU 308 ARG 309 TRP 310 LEU 311 CYS 312 PHE 313
Unit 6	ATP 901 LYS 950

Ligands

Unit 5	ATP 900
Unit 7	MG 601 ATP 902
Unit 8	ATP 903