2E5M - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF ISOCITRATE DEHYDROGENASE FROM SULFOLOBU STRAIN 7
• Keywords: NADP-DEPENDENT ISOCITRATE DEHYDROGENASE, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2E5M	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	409AA LONG HYPOTHETICAL NADP-DEPENDENT ISOCITRATE DEHYDROGENASE	A	403	3223	0
2	Protein	409AA LONG HYPOTHETICAL NADP-DEPENDENT ISOCITRATE DEHYDROGENASE	B	403	3223	0
3	Ligand	409AA LONG HYPOTHETICAL NADP-DEPENDENT ISOCITRATE DEHYDROGENASE	A	1	0	48
4	Ligand	409AA LONG HYPOTHETICAL NADP-DEPENDENT ISOCITRATE DEHYDROGENASE	B	1	0	48
5	Water			405	0	405
total				1213	6446	501

Proteins

Unit 1

MET 1 LEU 2 TYR 3 LYS 4 GLU 5 PRO 6 GLU 7 ASP 8 GLY 9 GLU 10 LYS 11 ILE 12 LYS 13 PHE 14 ASP 15 LYS 16 GLY 17 LYS 18 TRP 19 ILE 20 VAL 21 PRO 22 ASN 23 LYS 24 PRO 25 VAL 26 ILE 27 LEU 28 TYR 29 ILE 30 GLU 31 GLY 32 ASP 33 GLY 34 ILE 35 GLY 36 PRO 37 GLU 38 ILE 39 THR 40 ASN 41 ALA 42 ALA 43 ILE 44 LYS 45 VAL 46 ILE 47 ASN 48 LYS 49 ALA 50 VAL 51 GLU 52 ARG 53 ALA 54 TYR 55 GLY 56 SER 57 SER 58 ARG 59 GLU 60 ILE 61 LYS 62 TRP 63 LEU 64 GLU 65 VAL 66 TYR 67 ALA 68 GLY 69 GLU 70 LYS 71 ALA 72 GLU 73 LYS 74 LEU 75 VAL 76 ASN 77 ASP 78 ARG 79 PHE 80 PRO 81 LYS 82 GLU 83 THR 84 GLN 85 GLU 86 MET 87 LEU 88 LEU 89 LYS 90 TYR 91 ARG 92 VAL 93 VAL 94 LEU 95 LYS 96 GLY 97 PRO 98 LEU 99 GLU 100 THR 101 PRO 102 SER 109 VAL 110 ASN 111 VAL 112 ALA 113 ILE 114 ARG 115 LEU 116 MET 117 LEU 118 ASP 119 LEU 120 TYR 121 ALA 122 ASN 123 ILE 124 ARG 125 PRO 126 VAL 127 LYS 128 TYR 129 ILE 130 GLU 131 GLY 132 LEU 133 GLU 134 SER 135 PRO 136 LEU 137 LYS 138 HIS 139 PRO 140 GLU 141 LYS 142 VAL 143 ASP 144 MET 145 ILE 146 ILE 147 PHE 148 ARG 149 GLU 150 ASN 151 THR 152 ASP 153 ASP 154 LEU 155 TYR 156 ARG 157 GLY 158 ILE 159 GLU 160 TYR 161 PRO 162 PHE 163 ASN 164 SER 165 GLU 166 GLU 167 ALA 168 LYS 169 LYS 170 ILE 171 ARG 172 ASP 173 PHE 174 LEU 175 ARG 176 LYS 177 GLU 178 LEU 179 LYS 180 VAL 181 GLU 182 ILE 183 GLU 184 ASP 185 ASP 186 THR 187 GLY 188 ILE 189 GLY 190 ILE 191 LYS 192 VAL 193 MET 194 SER 195 LYS 196 TYR 197 LYS 198 THR 199 GLN 200 ARG 201 ILE 202 THR 203 ARG 204 LEU 205 ALA 206 ILE 207 GLN 208 TYR 209 ALA 210 ILE 211 GLU 212 HIS 213 LYS 214 ARG 215 LYS 216 LYS 217 VAL 218 THR 219 ILE 220 MET 221 HIS 222 LYS 223 GLY 224 ASN 225 VAL 226 MET 227 LYS 228 TYR 229 THR 230 GLU 231 GLY 232 ALA 233 PHE 234 ARG 235 GLU 236 TRP 237 ALA 238 TYR 239 GLU 240 VAL 241 ALA 242 LEU 243 LYS 244 GLU 245 TYR 246 ARG 247 ASP 248 PHE 249 ILE 250 VAL 251 THR 252 GLU 253 GLU 254 GLU 255 ILE 256 ASN 257 GLN 258 GLY 259 LYS 260 PRO 261 ASP 262 GLN 263 GLY 264 LYS 265 ILE 266 ILE 267 LEU 268 ASN 269 ASP 270 ARG 271 ILE 272 ALA 273 ASP 274 ASN 275 MET 276 PHE 277 GLN 278 GLN 279 ILE 280 ILE 281 ILE 282 ARG 283 PRO 284 GLU 285 GLU 286 TYR 287 ASP 288 ILE 289 ILE 290 LEU 291 ALA 292 PRO 293 ASN 294 VAL 295 ASN 296 GLY 297 ASP 298 TYR 299 ILE 300 SER 301 ASP 302 ALA 303 ALA 304 GLY 305 ALA 306 LEU 307 ILE 308 GLY 309 ASN 310 ILE 311 GLY 312 MET 313 LEU 314 GLY 315 GLY 316 ALA 317 ASN 318 ILE 319 GLY 320 ASP 321 GLU 322 GLY 323 GLY 324 MET 325 PHE 326 GLU 327 ALA 328 ILE 329 HIS 330 GLY 331 THR 332 ALA 333 PRO 334 LYS 335 TYR 336 ALA 337 GLY 338 LYS 339 ASN 340 VAL 341 ALA 342 ASN 343 PRO 344 THR 345 GLY 346 ILE 347 ILE 348 LYS 349 ALA 350 GLY 351 GLU 352 LEU 353 MET 354 LEU 355 ARG 356 TRP 357 MET 358 GLY 359 TRP 360 ASN 361 GLU 362 ALA 363 ALA 364 ASP 365 LEU 366 ILE 367 GLU 368 LYS 369 ALA 370 ILE 371 ASN 372 MET 373 ALA 374 ILE 375 ARG 376 ASP 377 LYS 378 LYS 379 VAL 380 THR 381 GLN 382 ASP 383 ILE 384 ALA 385 ARG 386 PHE 387 MET 388 GLY 389 VAL 390 LYS 391 ALA 392 LEU 393 GLY 394 THR 395 LYS 396 GLU 397 TYR 398 ALA 399 ASP 400 GLU 401 LEU 402 ILE 403 LYS 404 ILE 405 MET 406 ASP 407 THR 408 ILE 409

Unit 2

MET 1 LEU 2 TYR 3 LYS 4 GLU 5 PRO 6 GLU 7 ASP 8 GLY 9 GLU 10 LYS 11 ILE 12 LYS 13 PHE 14 ASP 15 LYS 16 GLY 17 LYS 18 TRP 19 ILE 20 VAL 21 PRO 22 ASN 23 LYS 24 PRO 25 VAL 26 ILE 27 LEU 28 TYR 29 ILE 30 GLU 31 GLY 32 ASP 33 GLY 34 ILE 35 GLY 36 PRO 37 GLU 38 ILE 39 THR 40 ASN 41 ALA 42 ALA 43 ILE 44 LYS 45 VAL 46 ILE 47 ASN 48 LYS 49 ALA 50 VAL 51 GLU 52 ARG 53 ALA 54 TYR 55 GLY 56 SER 57 SER 58 ARG 59 GLU 60 ILE 61 LYS 62 TRP 63 LEU 64 GLU 65 VAL 66 TYR 67 ALA 68 GLY 69 GLU 70 LYS 71 ALA 72 GLU 73 LYS 74 LEU 75 VAL 76 ASN 77 ASP 78 ARG 79 PHE 80 PRO 81 LYS 82 GLU 83 THR 84 GLN 85 GLU 86 MET 87 LEU 88 LEU 89 LYS 90 TYR 91 ARG 92 VAL 93 VAL 94 LEU 95 LYS 96 GLY 97 PRO 98 LEU 99 GLU 100 THR 101 PRO 102 SER 109 VAL 110 ASN 111 VAL 112 ALA 113 ILE 114 ARG 115 LEU 116 MET 117 LEU 118 ASP 119 LEU 120 TYR 121 ALA 122 ASN 123 ILE 124 ARG 125 PRO 126 VAL 127 LYS 128 TYR 129 ILE 130 GLU 131 GLY 132 LEU 133 GLU 134 SER 135 PRO 136 LEU 137 LYS 138 HIS 139 PRO 140 GLU 141 LYS 142 VAL 143 ASP 144 MET 145 ILE 146 ILE 147 PHE 148 ARG 149 GLU 150 ASN 151 THR 152 ASP 153 ASP 154 LEU 155 TYR 156 ARG 157 GLY 158 ILE 159 GLU 160 TYR 161 PRO 162 PHE 163 ASN 164 SER 165 GLU 166 GLU 167 ALA 168 LYS 169 LYS 170 ILE 171 ARG 172 ASP 173 PHE 174 LEU 175 ARG 176 LYS 177 GLU 178 LEU 179 LYS 180 VAL 181 GLU 182 ILE 183 GLU 184 ASP 185 ASP 186 THR 187 GLY 188 ILE 189 GLY 190 ILE 191 LYS 192 VAL 193 MET 194 SER 195 LYS 196 TYR 197 LYS 198 THR 199 GLN 200 ARG 201 ILE 202 THR 203 ARG 204 LEU 205 ALA 206 ILE 207 GLN 208 TYR 209 ALA 210 ILE 211 GLU 212 HIS 213 LYS 214 ARG 215 LYS 216 LYS 217 VAL 218 THR 219 ILE 220 MET 221 HIS 222 LYS 223 GLY 224 ASN 225 VAL 226 MET 227 LYS 228 TYR 229 THR 230 GLU 231 GLY 232 ALA 233 PHE 234 ARG 235 GLU 236 TRP 237 ALA 238 TYR 239 GLU 240 VAL 241 ALA 242 LEU 243 LYS 244 GLU 245 TYR 246 ARG 247 ASP 248 PHE 249 ILE 250 VAL 251 THR 252 GLU 253 GLU 254 GLU 255 ILE 256 ASN 257 GLN 258 GLY 259 LYS 260 PRO 261 ASP 262 GLN 263 GLY 264 LYS 265 ILE 266 ILE 267 LEU 268 ASN 269 ASP 270 ARG 271 ILE 272 ALA 273 ASP 274 ASN 275 MET 276 PHE 277 GLN 278 GLN 279 ILE 280 ILE 281 ILE 282 ARG 283 PRO 284 GLU 285 GLU 286 TYR 287 ASP 288 ILE 289 ILE 290 LEU 291 ALA 292 PRO 293 ASN 294 VAL 295 ASN 296 GLY 297 ASP 298 TYR 299 ILE 300 SER 301 ASP 302 ALA 303 ALA 304 GLY 305 ALA 306 LEU 307 ILE 308 GLY 309 ASN 310 ILE 311 GLY 312 MET 313 LEU 314 GLY 315 GLY 316 ALA 317 ASN 318 ILE 319 GLY 320 ASP 321 GLU 322 GLY 323 GLY 324 MET 325 PHE 326 GLU 327 ALA 328 ILE 329 HIS 330 GLY 331 THR 332 ALA 333 PRO 334 LYS 335 TYR 336 ALA 337 GLY 338 LYS 339 ASN 340 VAL 341 ALA 342 ASN 343 PRO 344 THR 345 GLY 346 ILE 347 ILE 348 LYS 349 ALA 350 GLY 351 GLU 352 LEU 353 MET 354 LEU 355 ARG 356 TRP 357 MET 358 GLY 359 TRP 360 ASN 361 GLU 362 ALA 363 ALA 364 ASP 365 LEU 366 ILE 367 GLU 368 LYS 369 ALA 370 ILE 371 ASN 372 MET 373 ALA 374 ILE 375 ARG 376 ASP 377 LYS 378 LYS 379 VAL 380 THR 381 GLN 382 ASP 383 ILE 384 ALA 385 ARG 386 PHE 387 MET 388 GLY 389 VAL 390 LYS 391 ALA 392 LEU 393 GLY 394 THR 395 LYS 396 GLU 397 TYR 398 ALA 399 ASP 400 GLU 401 LEU 402 ILE 403 LYS 404 ILE 405 MET 406 ASP 407 THR 408 ILE 409

Ligands

Unit 3	NAP 450
Unit 4	NAP 451