2DYY - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF PUTATIVE TRANSLATION INITIATION INHIBITOR PH0854 FROM PYROCOCCUS HORIKOSHII
• Keywords: PUTATIVE TRANSLATION INITIATION INHIBITOR, PYROCOCCUS HORIKOSHII, TRIMER, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2DYY	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	UPF0076 PROTEIN PH0854	A	125	965	0
2	Protein	UPF0076 PROTEIN PH0854	B	119	928	0
3	Protein	UPF0076 PROTEIN PH0854	C	119	921	0
4	Protein	UPF0076 PROTEIN PH0854	D	126	970	0
5	Protein	UPF0076 PROTEIN PH0854	E	120	922	0
6	Protein	UPF0076 PROTEIN PH0854	F	118	905	0
7	Protein	UPF0076 PROTEIN PH0854	G	125	971	0
8	Protein	UPF0076 PROTEIN PH0854	H	122	930	0
9	Protein	UPF0076 PROTEIN PH0854	I	116	895	0
10	Protein	UPF0076 PROTEIN PH0854	J	124	957	0
11	Protein	UPF0076 PROTEIN PH0854	K	123	944	0
12	Protein	UPF0076 PROTEIN PH0854	L	119	920	0
13	Water			233	0	233
total				1689	11228	233

Proteins

Unit 1	MET 1 LYS 2 GLU 3 VAL 4 ILE 5 PHE 6 THR 7 GLU 8 ASN 9 ALA 10 PRO 11 LYS 12 PRO 13 ILE 14 GLY 15 PRO 16 TYR 17 SER 18 GLN 19 ALA 20 ILE 21 LYS 22 ALA 23 GLY 24 ASN 25 PHE 26 LEU 27 PHE 28 ILE 29 ALA 30 GLY 31 GLN 32 ILE 33 PRO 34 ILE 35 ASP 36 PRO 37 LYS 38 THR 39 GLY 40 GLU 41 ILE 42 VAL 43 LYS 44 GLY 45 ASP 46 ILE 47 LYS 48 ASP 49 GLN 50 THR 51 ARG 52 GLN 53 VAL 54 LEU 55 GLU 56 ASN 57 ILE 58 LYS 59 ALA 60 ILE 61 LEU 62 GLU 63 ALA 64 ALA 65 GLY 66 TYR 67 SER 68 LEU 69 ASN 70 ASP 71 VAL 72 ILE 73 LYS 74 VAL 75 THR 76 VAL 77 TYR 78 LEU 79 LYS 80 ASP 81 ASN 83 ASP 84 PHE 85 ALA 86 LYS 87 MET 88 ASN 89 GLU 90 VAL 91 TYR 92 ALA 93 GLU 94 TYR 95 PHE 96 GLY 97 GLU 98 SER 99 LYS 100 PRO 101 ALA 102 ARG 103 VAL 104 ALA 105 VAL 106 GLU 107 VAL 108 SER 109 ARG 110 LEU 111 PRO 112 LYS 113 ASP 114 VAL 115 LEU 116 ILE 117 GLU 118 ILE 119 GLU 120 ALA 121 ILE 122 ALA 123 TYR 124 LYS 125 GLU 126
Unit 2	MET 1 LYS 2 GLU 3 VAL 4 ILE 5 PHE 6 THR 7 GLU 8 ASN 9 ALA 10 PRO 11 LYS 12 PRO 13 ILE 14 GLY 15 PRO 16 TYR 17 SER 18 GLN 19 ALA 20 ILE 21 LYS 22 ALA 23 GLY 24 ASN 25 PHE 26 LEU 27 PHE 28 ILE 29 ALA 30 GLY 31 GLN 32 ILE 33 PRO 34 ILE 35 ASP 36 PRO 37 LYS 38 THR 39 GLY 40 GLU 41 ILE 42 VAL 43 LYS 44 GLY 45 ASP 46 ILE 47 LYS 48 ASP 49 GLN 50 THR 51 ARG 52 GLN 53 VAL 54 LEU 55 GLU 56 ASN 57 ILE 58 LYS 59 ALA 60 ILE 61 LEU 62 GLU 63 ALA 64 ALA 65 GLY 66 TYR 67 SER 68 LEU 69 ASN 70 ASP 71 VAL 72 ILE 73 LYS 74 VAL 75 THR 76 VAL 77 TYR 78 LEU 79 LYS 80 ASP 81 ASN 89 GLU 90 VAL 91 TYR 92 ALA 93 GLU 94 TYR 95 PHE 96 GLY 97 GLU 98 SER 99 LYS 100 PRO 101 ALA 102 ARG 103 VAL 104 ALA 105 VAL 106 GLU 107 VAL 108 SER 109 ARG 110 LEU 111 PRO 112 LYS 113 ASP 114 VAL 115 LEU 116 ILE 117 GLU 118 ILE 119 GLU 120 ALA 121 ILE 122 ALA 123 TYR 124 LYS 125 GLU 126
Unit 3	MET 1 LYS 2 GLU 3 VAL 4 ILE 5 PHE 6 THR 7 GLU 8 ASN 9 ALA 10 PRO 11 LYS 12 PRO 13 ILE 14 GLY 15 PRO 16 TYR 17 SER 18 GLN 19 ALA 20 ILE 21 LYS 22 ALA 23 GLY 24 ASN 25 PHE 26 LEU 27 PHE 28 ILE 29 ALA 30 GLY 31 GLN 32 ILE 33 PRO 34 ILE 35 ASP 36 PRO 37 LYS 38 THR 39 GLY 40 GLU 41 ILE 42 VAL 43 LYS 44 GLY 45 ASP 46 ILE 47 LYS 48 ASP 49 GLN 50 THR 51 ARG 52 GLN 53 VAL 54 LEU 55 GLU 56 ASN 57 ILE 58 LYS 59 ALA 60 ILE 61 LEU 62 GLU 63 ALA 64 ALA 65 GLY 66 TYR 67 SER 68 LEU 69 ASN 70 ASP 71 VAL 72 ILE 73 LYS 74 VAL 75 THR 76 VAL 77 TYR 78 LEU 79 LYS 80 ASP 81 ASN 89 GLU 90 VAL 91 TYR 92 ALA 93 GLU 94 TYR 95 PHE 96 GLY 97 GLU 98 SER 99 LYS 100 PRO 101 ALA 102 ARG 103 VAL 104 ALA 105 VAL 106 GLU 107 VAL 108 SER 109 ARG 110 LEU 111 PRO 112 LYS 113 ASP 114 VAL 115 LEU 116 ILE 117 GLU 118 ILE 119 GLU 120 ALA 121 ILE 122 ALA 123 TYR 124 LYS 125 GLU 126
Unit 4	MET 1 LYS 2 GLU 3 VAL 4 ILE 5 PHE 6 THR 7 GLU 8 ASN 9 ALA 10 PRO 11 LYS 12 PRO 13 ILE 14 GLY 15 PRO 16 TYR 17 SER 18 GLN 19 ALA 20 ILE 21 LYS 22 ALA 23 GLY 24 ASN 25 PHE 26 LEU 27 PHE 28 ILE 29 ALA 30 GLY 31 GLN 32 ILE 33 PRO 34 ILE 35 ASP 36 PRO 37 LYS 38 THR 39 GLY 40 GLU 41 ILE 42 VAL 43 LYS 44 GLY 45 ASP 46 ILE 47 LYS 48 ASP 49 GLN 50 THR 51 ARG 52 GLN 53 VAL 54 LEU 55 GLU 56 ASN 57 ILE 58 LYS 59 ALA 60 ILE 61 LEU 62 GLU 63 ALA 64 ALA 65 GLY 66 TYR 67 SER 68 LEU 69 ASN 70 ASP 71 VAL 72 ILE 73 LYS 74 VAL 75 THR 76 VAL 77 TYR 78 LEU 79 LYS 80 ASP 81 MET 82 ASN 83 ASP 84 PHE 85 ALA 86 LYS 87 MET 88 ASN 89 GLU 90 VAL 91 TYR 92 ALA 93 GLU 94 TYR 95 PHE 96 GLY 97 GLU 98 SER 99 LYS 100 PRO 101 ALA 102 ARG 103 VAL 104 ALA 105 VAL 106 GLU 107 VAL 108 SER 109 ARG 110 LEU 111 PRO 112 LYS 113 ASP 114 VAL 115 LEU 116 ILE 117 GLU 118 ILE 119 GLU 120 ALA 121 ILE 122 ALA 123 TYR 124 LYS 125 GLU 126
Unit 5	MET 1 LYS 2 GLU 3 VAL 4 ILE 5 PHE 6 THR 7 GLU 8 ASN 9 ALA 10 PRO 11 LYS 12 PRO 13 ILE 14 GLY 15 PRO 16 TYR 17 SER 18 GLN 19 ALA 20 ILE 21 LYS 22 ALA 23 GLY 24 ASN 25 PHE 26 LEU 27 PHE 28 ILE 29 ALA 30 GLY 31 GLN 32 ILE 33 PRO 34 ILE 35 ASP 36 PRO 37 LYS 38 THR 39 GLY 40 GLU 41 ILE 42 VAL 43 GLY 45 ASP 46 ILE 47 LYS 48 ASP 49 GLN 50 THR 51 ARG 52 GLN 53 VAL 54 LEU 55 GLU 56 ASN 57 ILE 58 LYS 59 ALA 60 ILE 61 LEU 62 GLU 63 ALA 64 ALA 65 GLY 66 TYR 67 SER 68 LEU 69 ASN 70 ASP 71 VAL 72 ILE 73 LYS 74 VAL 75 THR 76 VAL 77 TYR 78 LEU 79 LYS 80 ASP 81 ALA 86 LYS 87 MET 88 ASN 89 GLU 90 VAL 91 TYR 92 ALA 93 GLU 94 TYR 95 PHE 96 GLY 97 GLU 98 SER 99 LYS 100 PRO 101 ALA 102 ARG 103 VAL 104 ALA 105 VAL 106 GLU 107 VAL 108 SER 109 ARG 110 LEU 111 PRO 112 LYS 113 ASP 114 VAL 115 LEU 116 ILE 117 GLU 118 ILE 119 GLU 120 ALA 121 ILE 122 ALA 123 TYR 124 LYS 125
Unit 6	LYS 2 GLU 3 VAL 4 ILE 5 PHE 6 THR 7 GLU 8 ASN 9 ALA 10 PRO 11 LYS 12 PRO 13 ILE 14 GLY 15 PRO 16 TYR 17 SER 18 GLN 19 ALA 20 ILE 21 LYS 22 ALA 23 GLY 24 ASN 25 PHE 26 LEU 27 PHE 28 ILE 29 ALA 30 GLY 31 GLN 32 ILE 33 PRO 34 ILE 35 ASP 36 PRO 37 LYS 38 THR 39 GLY 40 GLU 41 ILE 42 VAL 43 LYS 44 GLY 45 ASP 46 ILE 47 LYS 48 ASP 49 GLN 50 THR 51 ARG 52 GLN 53 VAL 54 LEU 55 GLU 56 ASN 57 ILE 58 LYS 59 ALA 60 ILE 61 LEU 62 GLU 63 ALA 64 ALA 65 GLY 66 TYR 67 SER 68 LEU 69 ASN 70 ASP 71 VAL 72 ILE 73 LYS 74 VAL 75 THR 76 VAL 77 TYR 78 LEU 79 LYS 80 MET 88 ASN 89 GLU 90 VAL 91 TYR 92 ALA 93 GLU 94 TYR 95 PHE 96 GLY 97 GLU 98 SER 99 LYS 100 PRO 101 ALA 102 ARG 103 VAL 104 ALA 105 VAL 106 GLU 107 VAL 108 SER 109 ARG 110 LEU 111 PRO 112 LYS 113 ASP 114 VAL 115 LEU 116 ILE 117 GLU 118 ILE 119 GLU 120 ALA 121 ILE 122 ALA 123 TYR 124 LYS 125 GLU 126
Unit 7	LYS 2 GLU 3 VAL 4 ILE 5 PHE 6 THR 7 GLU 8 ASN 9 ALA 10 PRO 11 LYS 12 PRO 13 ILE 14 GLY 15 PRO 16 TYR 17 SER 18 GLN 19 ALA 20 ILE 21 LYS 22 ALA 23 GLY 24 ASN 25 PHE 26 LEU 27 PHE 28 ILE 29 ALA 30 GLY 31 GLN 32 ILE 33 PRO 34 ILE 35 ASP 36 PRO 37 LYS 38 THR 39 GLY 40 GLU 41 ILE 42 VAL 43 LYS 44 GLY 45 ASP 46 ILE 47 LYS 48 ASP 49 GLN 50 THR 51 ARG 52 GLN 53 VAL 54 LEU 55 GLU 56 ASN 57 ILE 58 LYS 59 ALA 60 ILE 61 LEU 62 GLU 63 ALA 64 ALA 65 GLY 66 TYR 67 SER 68 LEU 69 ASN 70 ASP 71 VAL 72 ILE 73 LYS 74 VAL 75 THR 76 VAL 77 TYR 78 LEU 79 LYS 80 ASP 81 MET 82 ASN 83 ASP 84 PHE 85 ALA 86 LYS 87 MET 88 ASN 89 GLU 90 VAL 91 TYR 92 ALA 93 GLU 94 TYR 95 PHE 96 GLY 97 GLU 98 SER 99 LYS 100 PRO 101 ALA 102 ARG 103 VAL 104 ALA 105 VAL 106 GLU 107 VAL 108 SER 109 ARG 110 LEU 111 PRO 112 LYS 113 ASP 114 VAL 115 LEU 116 ILE 117 GLU 118 ILE 119 GLU 120 ALA 121 ILE 122 ALA 123 TYR 124 LYS 125 GLU 126
Unit 8	MET 1 LYS 2 GLU 3 VAL 4 ILE 5 PHE 6 THR 7 GLU 8 ASN 9 ALA 10 PRO 11 LYS 12 PRO 13 ILE 14 GLY 15 PRO 16 TYR 17 SER 18 GLN 19 ALA 20 ILE 21 LYS 22 ALA 23 GLY 24 ASN 25 PHE 26 LEU 27 PHE 28 ILE 29 ALA 30 GLY 31 GLN 32 ILE 33 PRO 34 ILE 35 ASP 36 PRO 37 LYS 38 THR 39 GLY 40 GLU 41 ILE 42 VAL 43 GLY 45 ASP 46 ILE 47 LYS 48 ASP 49 GLN 50 THR 51 ARG 52 GLN 53 VAL 54 LEU 55 GLU 56 ASN 57 ILE 58 LYS 59 ALA 60 ILE 61 LEU 62 GLU 63 ALA 64 ALA 65 GLY 66 TYR 67 SER 68 LEU 69 ASN 70 ASP 71 VAL 72 ILE 73 LYS 74 VAL 75 THR 76 VAL 77 TYR 78 LEU 79 LYS 80 ASP 81 PHE 85 ALA 86 LYS 87 MET 88 ASN 89 GLU 90 VAL 91 TYR 92 ALA 93 GLU 94 TYR 95 PHE 96 GLY 97 GLU 98 SER 99 LYS 100 PRO 101 ALA 102 ARG 103 VAL 104 ALA 105 VAL 106 GLU 107 VAL 108 SER 109 ARG 110 LEU 111 PRO 112 LYS 113 ASP 114 VAL 115 LEU 116 ILE 117 GLU 118 ILE 119 GLU 120 ALA 121 ILE 122 ALA 123 TYR 124 LYS 125 GLU 126
Unit 9	LYS 2 GLU 3 VAL 4 ILE 5 PHE 6 THR 7 GLU 8 ASN 9 ALA 10 PRO 11 LYS 12 PRO 13 ILE 14 GLY 15 PRO 16 TYR 17 SER 18 GLN 19 ALA 20 ILE 21 LYS 22 ALA 23 GLY 24 ASN 25 PHE 26 LEU 27 PHE 28 ILE 29 ALA 30 GLY 31 GLN 32 ILE 33 PRO 34 ILE 35 ASP 36 PRO 37 LYS 38 THR 39 GLY 40 GLU 41 ILE 42 VAL 43 LYS 44 GLY 45 ASP 46 ILE 47 LYS 48 ASP 49 GLN 50 THR 51 ARG 52 GLN 53 VAL 54 LEU 55 GLU 56 ASN 57 ILE 58 LYS 59 ALA 60 ILE 61 LEU 62 GLU 63 ALA 64 ALA 65 GLY 66 TYR 67 SER 68 LEU 69 ASN 70 ASP 71 VAL 72 ILE 73 LYS 74 VAL 75 THR 76 VAL 77 TYR 78 LEU 79 LYS 80 ASP 81 VAL 91 TYR 92 ALA 93 GLU 94 TYR 95 PHE 96 GLY 97 GLU 98 SER 99 LYS 100 PRO 101 ALA 102 ARG 103 VAL 104 ALA 105 VAL 106 GLU 107 VAL 108 SER 109 ARG 110 LEU 111 PRO 112 LYS 113 ASP 114 VAL 115 LEU 116 ILE 117 GLU 118 ILE 119 GLU 120 ALA 121 ILE 122 ALA 123 TYR 124 LYS 125 GLU 126
Unit 10	MET 1 LYS 2 GLU 3 VAL 4 ILE 5 PHE 6 THR 7 GLU 8 ASN 9 ALA 10 PRO 11 LYS 12 PRO 13 ILE 14 GLY 15 PRO 16 TYR 17 SER 18 GLN 19 ALA 20 ILE 21 LYS 22 ALA 23 GLY 24 ASN 25 PHE 26 LEU 27 PHE 28 ILE 29 ALA 30 GLY 31 GLN 32 ILE 33 PRO 34 ILE 35 ASP 36 PRO 37 LYS 38 THR 39 GLY 40 GLU 41 ILE 42 VAL 43 LYS 44 GLY 45 ASP 46 ILE 47 LYS 48 ASP 49 GLN 50 THR 51 ARG 52 GLN 53 VAL 54 LEU 55 GLU 56 ASN 57 ILE 58 LYS 59 ALA 60 ILE 61 LEU 62 GLU 63 ALA 64 ALA 65 GLY 66 TYR 67 SER 68 LEU 69 ASN 70 ASP 71 VAL 72 ILE 73 LYS 74 VAL 75 THR 76 VAL 77 TYR 78 LEU 79 LYS 80 ASN 83 ASP 84 PHE 85 ALA 86 LYS 87 MET 88 ASN 89 GLU 90 VAL 91 TYR 92 ALA 93 GLU 94 TYR 95 PHE 96 GLY 97 GLU 98 SER 99 LYS 100 PRO 101 ALA 102 ARG 103 VAL 104 ALA 105 VAL 106 GLU 107 VAL 108 SER 109 ARG 110 LEU 111 PRO 112 LYS 113 ASP 114 VAL 115 LEU 116 ILE 117 GLU 118 ILE 119 GLU 120 ALA 121 ILE 122 ALA 123 TYR 124 LYS 125 GLU 126
Unit 11	LYS 2 GLU 3 VAL 4 ILE 5 PHE 6 THR 7 GLU 8 ASN 9 ALA 10 PRO 11 LYS 12 PRO 13 ILE 14 GLY 15 PRO 16 TYR 17 SER 18 GLN 19 ALA 20 ILE 21 LYS 22 ALA 23 GLY 24 ASN 25 PHE 26 LEU 27 PHE 28 ILE 29 ALA 30 GLY 31 GLN 32 ILE 33 PRO 34 ILE 35 ASP 36 PRO 37 LYS 38 THR 39 GLY 40 GLU 41 ILE 42 VAL 43 LYS 44 GLY 45 ASP 46 ILE 47 LYS 48 ASP 49 GLN 50 THR 51 ARG 52 GLN 53 VAL 54 LEU 55 GLU 56 ASN 57 ILE 58 LYS 59 ALA 60 ILE 61 LEU 62 GLU 63 ALA 64 ALA 65 GLY 66 TYR 67 SER 68 LEU 69 ASN 70 ASP 71 VAL 72 ILE 73 LYS 74 VAL 75 THR 76 VAL 77 TYR 78 LEU 79 LYS 80 ASP 81 ASP 84 PHE 85 ALA 86 LYS 87 MET 88 ASN 89 GLU 90 VAL 91 TYR 92 ALA 93 GLU 94 TYR 95 PHE 96 GLY 97 GLU 98 SER 99 LYS 100 PRO 101 ALA 102 ARG 103 VAL 104 ALA 105 VAL 106 GLU 107 VAL 108 SER 109 ARG 110 LEU 111 PRO 112 LYS 113 ASP 114 VAL 115 LEU 116 ILE 117 GLU 118 ILE 119 GLU 120 ALA 121 ILE 122 ALA 123 TYR 124 LYS 125 GLU 126
Unit 12	MET 1 LYS 2 GLU 3 VAL 4 ILE 5 PHE 6 THR 7 GLU 8 ASN 9 ALA 10 PRO 11 LYS 12 PRO 13 ILE 14 GLY 15 PRO 16 TYR 17 SER 18 GLN 19 ALA 20 ILE 21 LYS 22 ALA 23 GLY 24 ASN 25 PHE 26 LEU 27 PHE 28 ILE 29 ALA 30 GLY 31 GLN 32 ILE 33 PRO 34 ILE 35 ASP 36 PRO 37 LYS 38 THR 39 GLY 40 GLU 41 ILE 42 VAL 43 LYS 44 GLY 45 ASP 46 ILE 47 LYS 48 ASP 49 GLN 50 THR 51 ARG 52 GLN 53 VAL 54 LEU 55 GLU 56 ASN 57 ILE 58 LYS 59 ALA 60 ILE 61 LEU 62 GLU 63 ALA 64 ALA 65 GLY 66 TYR 67 SER 68 LEU 69 ASN 70 ASP 71 VAL 72 ILE 73 LYS 74 VAL 75 THR 76 VAL 77 TYR 78 LEU 79 LYS 80 ASP 81 ASN 89 GLU 90 VAL 91 TYR 92 ALA 93 GLU 94 TYR 95 PHE 96 GLY 97 GLU 98 SER 99 LYS 100 PRO 101 ALA 102 ARG 103 VAL 104 ALA 105 VAL 106 GLU 107 VAL 108 SER 109 ARG 110 LEU 111 PRO 112 LYS 113 ASP 114 VAL 115 LEU 116 ILE 117 GLU 118 ILE 119 GLU 120 ALA 121 ILE 122 ALA 123 TYR 124 LYS 125 GLU 126