2DY1 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF EF-G-2 FROM THERMUS THERMOPHILUS
• Keywords: TRANSLOCATION, ELONGATION, GTP COMPLEX, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, SIGNALING PROTEIN, TRANSLATION
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2DY1	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	ELONGATION FACTOR G	A	660	5134	0
2	Ligand	ELONGATION FACTOR G	A	2	0	33
3	Water			598	0	598
total				1260	5134	631

Proteins

Unit 1

GLY 6 ALA 7 MET 8 ILE 9 ARG 10 THR 11 VAL 12 ALA 13 LEU 14 VAL 15 GLY 16 HIS 17 ALA 18 GLY 19 SER 20 GLY 21 LYS 22 THR 23 THR 24 LEU 25 THR 26 GLU 27 ALA 28 LEU 29 LEU 30 TYR 31 LYS 32 THR 33 GLY 34 ALA 35 LYS 36 GLU 37 ARG 38 ARG 39 GLY 40 ARG 41 VAL 42 GLU 43 GLU 44 GLY 45 THR 46 THR 47 THR 48 THR 49 ASP 50 TYR 51 THR 52 PRO 53 GLU 54 ALA 55 LYS 56 LEU 57 HIS 58 ARG 59 THR 60 THR 61 VAL 62 ARG 63 THR 64 GLY 65 VAL 66 ALA 67 PRO 68 LEU 69 LEU 70 PHE 71 ARG 72 GLY 73 HIS 74 ARG 75 VAL 76 PHE 77 LEU 78 LEU 79 ASP 80 ALA 81 PRO 82 GLY 83 TYR 84 GLY 85 ASP 86 PHE 87 VAL 88 GLY 89 GLU 90 ILE 91 ARG 92 GLY 93 ALA 94 LEU 95 GLU 96 ALA 97 ALA 98 ASP 99 ALA 100 ALA 101 LEU 102 VAL 103 ALA 104 VAL 105 SER 106 ALA 107 GLU 108 ALA 109 GLY 110 VAL 111 GLN 112 VAL 113 GLY 114 THR 115 GLU 116 ARG 117 ALA 118 TRP 119 THR 120 VAL 121 ALA 122 GLU 123 ARG 124 LEU 125 GLY 126 LEU 127 PRO 128 ARG 129 MET 130 VAL 131 VAL 132 VAL 133 THR 134 LYS 135 LEU 136 ASP 137 LYS 138 GLY 139 GLY 140 ASP 141 TYR 142 TYR 143 ALA 144 LEU 145 LEU 146 GLU 147 ASP 148 LEU 149 ARG 150 SER 151 THR 152 LEU 153 GLY 154 PRO 155 ILE 156 LEU 157 PRO 158 ILE 159 ASP 160 LEU 161 PRO 162 LEU 163 TYR 164 GLU 165 GLY 166 GLY 167 LYS 168 TRP 169 VAL 170 GLY 171 LEU 172 ILE 173 ASP 174 VAL 175 PHE 176 HIS 177 GLY 178 LYS 179 ALA 180 TYR 181 ARG 182 TYR 183 GLU 184 ASN 185 GLY 186 GLU 187 GLU 188 ARG 189 GLU 190 ALA 191 GLU 192 VAL 193 PRO 194 PRO 195 GLU 196 GLU 197 ARG 198 GLU 199 ARG 200 VAL 201 GLN 202 ARG 203 PHE 204 ARG 205 GLN 206 GLU 207 VAL 208 LEU 209 GLU 210 ALA 211 ILE 212 VAL 213 GLU 214 THR 215 ASP 216 GLU 217 GLY 218 LEU 219 LEU 220 GLU 221 LYS 222 TYR 223 LEU 224 GLU 225 GLY 226 GLU 227 GLU 228 VAL 229 THR 230 GLY 231 GLU 232 ALA 233 LEU 234 GLU 235 LYS 236 ALA 237 PHE 238 HIS 239 GLU 240 ALA 241 VAL 242 ARG 243 ARG 244 GLY 245 LEU 246 LEU 247 TYR 248 PRO 249 VAL 250 ALA 251 LEU 252 ALA 253 SER 254 GLY 255 GLU 256 ARG 257 GLU 258 ILE 259 GLY 260 VAL 261 LEU 262 PRO 263 LEU 264 LEU 265 GLU 266 LEU 267 ILE 268 LEU 269 GLU 270 ALA 271 LEU 272 PRO 273 SER 274 PRO 275 THR 276 GLU 277 ARG 278 PHE 279 GLY 280 ASP 281 GLY 282 PRO 283 PRO 284 LEU 285 ALA 286 LYS 287 VAL 288 PHE 289 LYS 290 VAL 291 GLN 292 VAL 293 ASP 294 PRO 295 PHE 296 MET 297 GLY 298 GLN 299 VAL 300 ALA 301 TYR 302 LEU 303 ARG 304 LEU 305 TYR 306 ARG 307 GLY 308 ARG 309 LEU 310 LYS 311 PRO 312 GLY 313 ASP 314 SER 315 LEU 316 GLN 317 SER 318 GLU 319 ALA 320 GLY 321 GLN 322 VAL 323 ARG 324 LEU 325 PRO 326 HIS 327 LEU 328 TYR 329 VAL 330 PRO 331 MET 332 GLY 333 LYS 334 ASP 335 LEU 336 LEU 337 GLU 338 VAL 339 GLU 340 GLU 341 ALA 342 GLU 343 ALA 344 GLY 345 PHE 346 VAL 347 LEU 348 GLY 349 VAL 350 PRO 351 LYS 352 ALA 353 GLU 354 GLY 355 LEU 356 HIS 357 ARG 358 GLY 359 MET 360 VAL 361 LEU 362 TRP 363 GLN 364 GLY 365 GLU 366 LYS 367 PRO 368 GLU 369 SER 370 GLU 371 GLU 372 VAL 373 PRO 374 PHE 375 ALA 376 ARG 377 LEU 378 PRO 379 ASP 380 PRO 381 ASN 382 VAL 383 PRO 384 VAL 385 ALA 386 LEU 387 HIS 388 PRO 389 LYS 390 GLY 391 ARG 392 THR 393 ASP 394 GLU 395 ALA 396 ARG 397 LEU 398 GLY 399 GLU 400 ALA 401 LEU 402 ARG 403 LYS 404 LEU 405 LEU 406 GLU 407 GLU 408 ASP 409 PRO 410 SER 411 LEU 412 LYS 413 LEU 414 GLU 415 ARG 416 GLN 417 GLU 418 GLU 419 THR 420 GLY 421 GLU 422 LEU 423 LEU 424 LEU 425 TRP 426 GLY 427 HIS 428 GLY 429 GLU 430 LEU 431 HIS 432 LEU 433 ALA 434 THR 435 ALA 436 LYS 437 GLU 438 ARG 439 LEU 440 GLN 441 ASP 442 TYR 443 GLY 444 VAL 445 GLU 446 VAL 447 GLU 448 PHE 449 SER 450 VAL 451 PRO 452 LYS 453 VAL 454 PRO 455 TYR 456 ARG 457 GLU 458 THR 459 ILE 460 LYS 461 LYS 462 VAL 463 ALA 464 GLU 465 GLY 466 GLN 467 GLY 468 LYS 469 TYR 470 LYS 471 LYS 472 GLN 473 THR 474 GLY 475 GLY 476 HIS 477 GLY 478 GLN 479 TYR 480 GLY 481 ASP 482 VAL 483 TRP 484 LEU 485 ARG 486 LEU 487 GLU 488 PRO 489 ALA 490 SER 491 GLU 492 TYR 493 GLY 494 PHE 495 GLU 496 TRP 497 ARG 498 ILE 499 THR 500 GLY 501 GLY 502 VAL 503 ILE 504 PRO 505 SER 506 LYS 507 TYR 508 GLN 509 GLU 510 ALA 511 ILE 512 GLU 513 GLU 514 GLY 515 ILE 516 LYS 517 GLU 518 ALA 519 ALA 520 LYS 521 LYS 522 GLY 523 VAL 524 LEU 525 ALA 526 GLY 527 PHE 528 PRO 529 VAL 530 MET 531 GLY 532 PHE 533 LYS 534 ALA 535 ILE 536 VAL 537 TYR 538 ASN 539 GLY 540 SER 541 TYR 542 HIS 543 GLU 544 VAL 545 ASP 546 SER 547 SER 548 ASP 549 LEU 550 ALA 551 PHE 552 GLN 553 ILE 554 ALA 555 ALA 556 SER 557 LEU 558 ALA 559 PHE 560 LYS 561 LYS 562 VAL 563 MET 564 ALA 565 GLU 566 ALA 567 HIS 568 PRO 569 VAL 570 LEU 571 LEU 572 GLU 573 PRO 574 ILE 575 TYR 576 ARG 577 LEU 578 LYS 579 VAL 580 LEU 581 ALA 582 PRO 583 GLN 584 GLU 585 ARG 586 VAL 587 GLY 588 ASP 589 VAL 590 LEU 591 SER 592 ASP 593 LEU 594 GLN 595 ALA 596 ARG 597 ARG 598 GLY 599 ARG 600 ILE 601 LEU 602 GLY 603 MET 604 GLU 605 GLN 606 GLU 607 GLY 608 ALA 609 LEU 610 SER 611 VAL 612 VAL 613 HIS 614 ALA 615 GLU 616 VAL 617 PRO 618 LEU 619 ALA 620 GLU 621 VAL 622 LEU 623 GLU 624 TYR 625 TYR 626 LYS 627 ALA 628 LEU 629 PRO 630 GLY 631 LEU 632 THR 633 GLY 634 GLY 635 ALA 636 GLY 637 ALA 638 TYR 639 THR 640 LEU 641 GLU 642 PHE 643 SER 644 HIS 645 TYR 646 ALA 647 GLU 648 VAL 649 PRO 650 PRO 651 HIS 652 LEU 653 ALA 654 GLN 655 ARG 656 ILE 657 VAL 658 GLN 659 GLU 660 ARG 661 ALA 662 GLN 663 GLU 664 GLY 665

Ligands

Unit 2

GTP 700 MG 701