2DXD - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF NUCLEOSIDE DIPHOSPHATE KINASE IN COMPLE ANALOG
• Keywords: NUCLEOSIDE BINDING, KINASE, STRUCTURAL GENOMICS, NPPSFA, NAT PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKE STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRANSFERAS
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2DXD	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	NUCLEOSIDE DIPHOSPHATE KINASE	A	154	1240	0
2	Protein	NUCLEOSIDE DIPHOSPHATE KINASE	B	154	1240	0
3	Ligand	NUCLEOSIDE DIPHOSPHATE KINASE	A	2	0	24
4	Ligand	NUCLEOSIDE DIPHOSPHATE KINASE	B	2	0	24
5	Water			434	0	434
total				746	2480	482

Proteins

Unit 1

SER 5 GLU 6 THR 7 GLU 8 ARG 9 THR 10 LEU 11 VAL 12 ILE 13 ILE 14 LYS 15 PRO 16 ASP 17 ALA 18 VAL 19 VAL 20 ARG 21 GLY 22 LEU 23 ILE 24 GLY 25 GLU 26 ILE 27 ILE 28 SER 29 ARG 30 PHE 31 GLU 32 LYS 33 LYS 34 GLY 35 LEU 36 LYS 37 ILE 38 VAL 39 GLY 40 MET 41 LYS 42 MET 43 ILE 44 TRP 45 ILE 46 ASP 47 ARG 48 GLU 49 LEU 50 ALA 51 GLU 52 LYS 53 HIS 54 TYR 55 GLU 56 GLU 57 HIS 58 ARG 59 GLU 60 LYS 61 PRO 62 PHE 63 PHE 64 LYS 65 ALA 66 LEU 67 ILE 68 ASP 69 TYR 70 ILE 71 THR 72 LYS 73 THR 74 PRO 75 VAL 76 VAL 77 VAL 78 MET 79 VAL 80 LEU 81 GLU 82 GLY 83 ARG 84 TYR 85 ALA 86 VAL 87 GLU 88 VAL 89 VAL 90 ARG 91 LYS 92 MET 93 ALA 94 GLY 95 ALA 96 THR 97 ASP 98 PRO 99 LYS 100 ASP 101 ALA 102 ALA 103 PRO 104 GLY 105 THR 106 ILE 107 ARG 108 GLY 109 ASP 110 PHE 111 GLY 112 LEU 113 GLU 114 VAL 115 SER 116 ASP 117 ALA 118 ILE 119 CYS 120 ASN 121 VAL 122 ILE 123 HIS 124 ALA 125 SER 126 ASP 127 SER 128 LYS 129 GLU 130 SER 131 ALA 132 GLU 133 ARG 134 GLU 135 ILE 136 SER 137 LEU 138 PHE 139 PHE 140 LYS 141 PRO 142 GLU 143 GLU 144 LEU 145 PHE 146 GLU 147 TYR 148 PRO 149 ARG 150 ALA 151 ALA 152 ASP 153 TRP 154 PHE 155 TYR 156 LYS 157 LYS 158

Unit 2

SER 5 GLU 6 THR 7 GLU 8 ARG 9 THR 10 LEU 11 VAL 12 ILE 13 ILE 14 LYS 15 PRO 16 ASP 17 ALA 18 VAL 19 VAL 20 ARG 21 GLY 22 LEU 23 ILE 24 GLY 25 GLU 26 ILE 27 ILE 28 SER 29 ARG 30 PHE 31 GLU 32 LYS 33 LYS 34 GLY 35 LEU 36 LYS 37 ILE 38 VAL 39 GLY 40 MET 41 LYS 42 MET 43 ILE 44 TRP 45 ILE 46 ASP 47 ARG 48 GLU 49 LEU 50 ALA 51 GLU 52 LYS 53 HIS 54 TYR 55 GLU 56 GLU 57 HIS 58 ARG 59 GLU 60 LYS 61 PRO 62 PHE 63 PHE 64 LYS 65 ALA 66 LEU 67 ILE 68 ASP 69 TYR 70 ILE 71 THR 72 LYS 73 THR 74 PRO 75 VAL 76 VAL 77 VAL 78 MET 79 VAL 80 LEU 81 GLU 82 GLY 83 ARG 84 TYR 85 ALA 86 VAL 87 GLU 88 VAL 89 VAL 90 ARG 91 LYS 92 MET 93 ALA 94 GLY 95 ALA 96 THR 97 ASP 98 PRO 99 LYS 100 ASP 101 ALA 102 ALA 103 PRO 104 GLY 105 THR 106 ILE 107 ARG 108 GLY 109 ASP 110 PHE 111 GLY 112 LEU 113 GLU 114 VAL 115 SER 116 ASP 117 ALA 118 ILE 119 CYS 120 ASN 121 VAL 122 ILE 123 HIS 124 ALA 125 SER 126 ASP 127 SER 128 LYS 129 GLU 130 SER 131 ALA 132 GLU 133 ARG 134 GLU 135 ILE 136 SER 137 LEU 138 PHE 139 PHE 140 LYS 141 PRO 142 GLU 143 GLU 144 LEU 145 PHE 146 GLU 147 TYR 148 PRO 149 ARG 150 ALA 151 ALA 152 ASP 153 TRP 154 PHE 155 TYR 156 LYS 157 LYS 158

Ligands

Unit 3	ANP 501 CL 701
Unit 4	ANP 502 CL 702