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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF 2,6-DIHYDROXYBENZOATE DECARBOXYLASE COM WITH 2,6-DIHYDROXYBENZOATE
Keywords TIM BARREL, LYASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2DVU     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 325 2632 0
2  Protein    B 324 2614 0
3  Protein    C 324 2613 0
4  Protein    D 321 2601 0
5  Ligand    A 2 0 12
6  Ligand    B 2 0 12
7  Ligand    C 2 0 12
8  Ligand    D 2 0 12
9 Water     1034 0 1034
total       2336 10460 1082
Proteins
Unit 1 MET1 GLN2 GLY3 LYS4 VAL5 ALA6 LEU7 GLU8 GLU9 HIS10 PHE11 ALA12 ILE13 PRO14 GLU15 THR16 LEU17 GLN18 ASP19 SER20 ALA21 GLY22 PHE23 VAL24 PRO25 GLY26 ASP27 TYR28 TRP29 LYS30 GLU31 LEU32 GLN33 HIS34 ARG35 LEU36 LEU37 ASP38 ILE39 GLN40 ASP41 THR42 ARG43 LEU44 LYS45 LEU46 MET47 ASP48 ALA49 HIS50 GLY51 ILE52 GLU53 THR54 MET55 ILE56 LEU57 SER58 LEU59 ASN60 ALA61 PRO62 ALA63 VAL64 GLN65 ALA66 ILE67 PRO68 ASP69 ARG70 ARG71 LYS72 ALA73 ILE74 GLU75 ILE76 ALA77 ARG78 ARG79 ALA80 ASN81 ASP82 VAL83 LEU84 ALA85 GLU86 GLU87 CYS88 ALA89 LYS90 ARG91 PRO92 ASP93 ARG94 PHE95 LEU96 ALA97 PHE98 ALA99 ALA100 LEU101 PRO102 LEU103 GLN104 ASP105 PRO106 ASP107 ALA108 ALA109 THR110 GLU111 GLU112 LEU113 GLN114 ARG115 CYS116 VAL117 ASN118 ASP119 LEU120 GLY121 PHE122 VAL123 GLY124 ALA125 LEU126 VAL127 ASN128 GLY129 PHE130 SER131 GLN132 GLU133 GLY134 ASP135 GLY136 GLN137 THR138 PRO139 LEU140 TYR141 TYR142 ASP143 LEU144 PRO145 GLN146 TYR147 ARG148 PRO149 PHE150 TRP151 GLY152 GLU153 VAL154 GLU155 LYS156 LEU157 ASP158 VAL159 PRO160 PHE161 TYR162 LEU163 HIS164 PRO165 ARG166 ASN167 PRO168 LEU169 PRO170 GLN171 ASP172 SER173 ARG174 ILE175 TYR176 ASP177 GLY178 HIS179 PRO180 TRP181 LEU182 LEU183 GLY184 PRO185 THR186 TRP187 ALA188 PHE189 ALA190 GLN191 GLU192 THR193 ALA194 VAL195 HIS196 ALA197 LEU198 ARG199 LEU200 MET201 ALA202 SER203 GLY204 LEU205 PHE206 ASP207 GLU208 HIS209 PRO210 ARG211 LEU212 ASN213 ILE214 ILE215 LEU216 GLY217 HIS218 MET219 GLY220 GLU221 GLY222 LEU223 PRO224 TYR225 MET226 MET227 TRP228 ARG229 ILE230 ASP231 HIS232 ARG233 ASN234 ALA235 TRP236 VAL237 LYS238 LEU239 PRO240 PRO241 ARG242 TYR243 PRO244 ALA245 LYS246 ARG247 ARG248 PHE249 MET250 ASP251 TYR252 PHE253 ASN254 GLU255 ASN256 PHE257 HIS258 ILE259 THR260 THR261 SER262 GLY263 ASN264 PHE265 ARG266 THR267 GLN268 THR269 LEU270 ILE271 ASP272 ALA273 ILE274 LEU275 GLU276 ILE277 GLY278 ALA279 ASP280 ARG281 ILE282 LEU283 PHE284 SER285 THR286 ASP287 TRP288 PRO289 PHE290 GLU291 ASN292 ILE293 ASP294 HIS295 ALA296 SER297 ASP298 TRP299 PHE300 ASN301 ALA302 THR303 SER304 ILE305 ALA306 GLU307 ALA308 ASP309 ARG310 VAL311 LYS312 ILE313 GLY314 ARG315 THR316 ASN317 ALA318 ARG319 ARG320 LEU321 PHE322 LYS323 LEU324 ASP325
Unit 2 MET1 GLN2 GLY3 LYS4 VAL5 ALA6 LEU7 GLU8 GLU9 HIS10 PHE11 ALA12 ILE13 PRO14 GLU15 THR16 LEU17 GLN18 ASP19 SER20 ALA21 GLY22 PHE23 VAL24 PRO25 GLY26 ASP27 TYR28 TRP29 LYS30 GLU31 LEU32 GLN33 HIS34 ARG35 LEU36 LEU37 ASP38 ILE39 GLN40 ASP41 THR42 ARG43 LEU44 LYS45 LEU46 MET47 ASP48 ALA49 HIS50 GLY51 ILE52 GLU53 THR54 MET55 ILE56 LEU57 SER58 LEU59 ASN60 ALA61 PRO62 ALA63 VAL64 GLN65 ALA66 ILE67 PRO68 ASP69 ARG70 ARG71 LYS72 ALA73 ILE74 GLU75 ILE76 ALA77 ARG78 ARG79 ALA80 ASN81 ASP82 VAL83 LEU84 ALA85 GLU86 GLU87 CYS88 ALA89 LYS90 ARG91 PRO92 ASP93 ARG94 PHE95 LEU96 ALA97 PHE98 ALA99 ALA100 LEU101 PRO102 LEU103 GLN104 ASP105 PRO106 ASP107 ALA108 ALA109 THR110 GLU111 GLU112 LEU113 GLN114 ARG115 CYS116 VAL117 ASN118 ASP119 LEU120 GLY121 PHE122 VAL123 GLY124 ALA125 LEU126 VAL127 ASN128 GLY129 PHE130 SER131 GLN132 GLU133 GLY134 ASP135 GLY136 GLN137 THR138 PRO139 LEU140 TYR141 TYR142 ASP143 LEU144 PRO145 GLN146 TYR147 ARG148 PRO149 PHE150 TRP151 GLY152 GLU153 VAL154 GLU155 LYS156 LEU157 ASP158 VAL159 PRO160 PHE161 TYR162 LEU163 HIS164 PRO165 ARG166 ASN167 PRO168 LEU169 PRO170 GLN171 ASP172 SER173 ARG174 ILE175 TYR176 ASP177 GLY178 HIS179 PRO180 TRP181 LEU182 LEU183 GLY184 PRO185 THR186 TRP187 ALA188 PHE189 ALA190 GLN191 GLU192 THR193 ALA194 VAL195 HIS196 ALA197 LEU198 ARG199 LEU200 MET201 ALA202 SER203 GLY204 LEU205 PHE206 ASP207 GLU208 HIS209 PRO210 ARG211 LEU212 ASN213 ILE214 ILE215 LEU216 GLY217 HIS218 MET219 GLY220 GLU221 GLY222 LEU223 PRO224 TYR225 MET226 MET227 TRP228 ARG229 ILE230 ASP231 HIS232 ARG233 ASN234 ALA235 TRP236 VAL237 LYS238 LEU239 PRO240 PRO241 ARG242 TYR243 PRO244 ALA245 LYS246 ARG247 ARG248 PHE249 MET250 ASP251 TYR252 PHE253 ASN254 GLU255 ASN256 PHE257 HIS258 ILE259 THR260 THR261 SER262 GLY263 ASN264 PHE265 ARG266 THR267 GLN268 THR269 LEU270 ILE271 ASP272 ALA273 ILE274 LEU275 GLU276 ILE277 GLY278 ALA279 ASP280 ARG281 ILE282 LEU283 PHE284 SER285 THR286 ASP287 TRP288 PRO289 PHE290 GLU291 ASN292 ILE293 ASP294 HIS295 ALA296 SER297 ASP298 TRP299 PHE300 ASN301 ALA302 THR303 SER304 ILE305 ALA306 GLU307 ALA308 ASP309 ARG310 VAL311 LYS312 ILE313 GLY314 ARG315 THR316 ASN317 ALA318 ARG319 ARG320 LEU321 PHE322 LYS323 LEU324
Unit 3 MET1 GLN2 GLY3 LYS4 VAL5 ALA6 LEU7 GLU8 GLU9 HIS10 PHE11 ALA12 ILE13 PRO14 GLU15 THR16 LEU17 GLN18 ASP19 SER20 PHE23 VAL24 PRO25 GLY26 ASP27 TYR28 TRP29 LYS30 GLU31 LEU32 GLN33 HIS34 ARG35 LEU36 LEU37 ASP38 ILE39 GLN40 ASP41 THR42 ARG43 LEU44 LYS45 LEU46 MET47 ASP48 ALA49 HIS50 GLY51 ILE52 GLU53 THR54 MET55 ILE56 LEU57 SER58 LEU59 ASN60 ALA61 PRO62 ALA63 VAL64 GLN65 ALA66 ILE67 PRO68 ASP69 ARG70 ARG71 LYS72 ALA73 ILE74 GLU75 ILE76 ALA77 ARG78 ARG79 ALA80 ASN81 ASP82 VAL83 LEU84 ALA85 GLU86 GLU87 CYS88 ALA89 LYS90 ARG91 PRO92 ASP93 ARG94 PHE95 LEU96 ALA97 PHE98 ALA99 ALA100 LEU101 PRO102 LEU103 GLN104 ASP105 PRO106 ASP107 ALA108 ALA109 THR110 GLU111 GLU112 LEU113 GLN114 ARG115 CYS116 VAL117 ASN118 ASP119 LEU120 GLY121 PHE122 VAL123 GLY124 ALA125 LEU126 VAL127 ASN128 GLY129 PHE130 SER131 GLN132 GLU133 GLY134 ASP135 GLY136 GLN137 THR138 PRO139 LEU140 TYR141 TYR142 ASP143 LEU144 PRO145 GLN146 TYR147 ARG148 PRO149 PHE150 TRP151 GLY152 GLU153 VAL154 GLU155 LYS156 LEU157 ASP158 VAL159 PRO160 PHE161 TYR162 LEU163 HIS164 PRO165 ARG166 ASN167 PRO168 LEU169 PRO170 GLN171 ASP172 SER173 ARG174 ILE175 TYR176 ASP177 GLY178 HIS179 PRO180 TRP181 LEU182 LEU183 GLY184 PRO185 THR186 TRP187 ALA188 PHE189 ALA190 GLN191 GLU192 THR193 ALA194 VAL195 HIS196 ALA197 LEU198 ARG199 LEU200 MET201 ALA202 SER203 GLY204 LEU205 PHE206 ASP207 GLU208 HIS209 PRO210 ARG211 LEU212 ASN213 ILE214 ILE215 LEU216 GLY217 HIS218 MET219 GLY220 GLU221 GLY222 LEU223 PRO224 TYR225 MET226 MET227 TRP228 ARG229 ILE230 ASP231 HIS232 ARG233 ASN234 ALA235 TRP236 VAL237 LYS238 LEU239 PRO240 PRO241 ARG242 TYR243 PRO244 ALA245 LYS246 ARG247 ARG248 PHE249 MET250 ASP251 TYR252 PHE253 ASN254 GLU255 ASN256 PHE257 HIS258 ILE259 THR260 THR261 SER262 GLY263 ASN264 PHE265 ARG266 THR267 GLN268 THR269 LEU270 ILE271 ASP272 ALA273 ILE274 LEU275 GLU276 ILE277 GLY278 ALA279 ASP280 ARG281 ILE282 LEU283 PHE284 SER285 THR286 ASP287 TRP288 PRO289 PHE290 GLU291 ASN292 ILE293 ASP294 HIS295 ALA296 SER297 ASP298 TRP299 PHE300 ASN301 ALA302 THR303 SER304 ILE305 ALA306 GLU307 ALA308 ASP309 ARG310 VAL311 LYS312 ILE313 GLY314 ARG315 THR316 ASN317 ALA318 ARG319 ARG320 LEU321 PHE322 LYS323 LEU324 ASP325 GLY326
Unit 4 MET1 GLN2 GLY3 LYS4 VAL5 ALA6 LEU7 GLU8 GLU9 HIS10 PHE11 ALA12 ILE13 PRO14 GLU15 THR16 LEU17 GLN18 ASP19 SER20 VAL24 PRO25 GLY26 ASP27 TYR28 TRP29 LYS30 GLU31 LEU32 GLN33 HIS34 ARG35 LEU36 LEU37 ASP38 ILE39 GLN40 ASP41 THR42 ARG43 LEU44 LYS45 LEU46 MET47 ASP48 ALA49 HIS50 GLY51 ILE52 GLU53 THR54 MET55 ILE56 LEU57 SER58 LEU59 ASN60 ALA61 PRO62 ALA63 VAL64 GLN65 ALA66 ILE67 PRO68 ASP69 ARG70 ARG71 LYS72 ALA73 ILE74 GLU75 ILE76 ALA77 ARG78 ARG79 ALA80 ASN81 ASP82 VAL83 LEU84 ALA85 GLU86 GLU87 CYS88 ALA89 LYS90 ARG91 PRO92 ASP93 ARG94 PHE95 LEU96 ALA97 PHE98 ALA99 ALA100 LEU101 PRO102 LEU103 GLN104 ASP105 PRO106 ASP107 ALA108 ALA109 THR110 GLU111 GLU112 LEU113 GLN114 ARG115 CYS116 VAL117 ASN118 ASP119 LEU120 GLY121 PHE122 VAL123 GLY124 ALA125 LEU126 VAL127 ASN128 GLY129 PHE130 SER131 GLN132 GLU133 GLY134 ASP135 GLY136 GLN137 THR138 PRO139 LEU140 TYR141 TYR142 ASP143 LEU144 PRO145 GLN146 TYR147 ARG148 PRO149 PHE150 TRP151 GLY152 GLU153 VAL154 GLU155 LYS156 LEU157 ASP158 VAL159 PRO160 PHE161 TYR162 LEU163 HIS164 PRO165 ARG166 ASN167 PRO168 LEU169 PRO170 GLN171 ASP172 SER173 ARG174 ILE175 TYR176 ASP177 GLY178 HIS179 PRO180 TRP181 LEU182 LEU183 GLY184 PRO185 THR186 TRP187 ALA188 PHE189 ALA190 GLN191 GLU192 THR193 ALA194 VAL195 HIS196 ALA197 LEU198 ARG199 LEU200 MET201 ALA202 SER203 GLY204 LEU205 PHE206 ASP207 GLU208 HIS209 PRO210 ARG211 LEU212 ASN213 ILE214 ILE215 LEU216 GLY217 HIS218 MET219 GLY220 GLU221 GLY222 LEU223 PRO224 TYR225 MET226 MET227 TRP228 ARG229 ILE230 ASP231 HIS232 ARG233 ASN234 ALA235 TRP236 VAL237 LYS238 LEU239 PRO240 PRO241 ARG242 TYR243 PRO244 ALA245 LYS246 ARG247 ARG248 PHE249 MET250 ASP251 TYR252 PHE253 ASN254 GLU255 ASN256 PHE257 HIS258 ILE259 THR260 THR261 SER262 GLY263 ASN264 PHE265 ARG266 THR267 GLN268 THR269 LEU270 ILE271 ASP272 ALA273 ILE274 LEU275 GLU276 ILE277 GLY278 ALA279 ASP280 ARG281 ILE282 LEU283 PHE284 SER285 THR286 ASP287 TRP288 PRO289 PHE290 GLU291 ASN292 ILE293 ASP294 HIS295 ALA296 SER297 ASP298 TRP299 PHE300 ASN301 ALA302 THR303 SER304 ILE305 ALA306 GLU307 ALA308 ASP309 ARG310 VAL311 LYS312 ILE313 GLY314 ARG315 THR316 ASN317 ALA318 ARG319 ARG320 LEU321 PHE322 LYS323 LEU324
Ligands
Unit 5 ZN1501 GRE1511
Unit 6 ZN1502 GRE1512
Unit 7 ZN1503 GRE1513
Unit 8 ZN1504 GRE1514
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany