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Title | CRYSTAL STRUCTURE OF PROJECT ID TT0128 FROM THERMUS THERMOPH | |
Keywords | PYRIMIDINE-NUCLEOSIDE PHOSPHORYLASE, STRUCTURAL GENOMICS, NP NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALY RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRAN | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2DSJ | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | PYRIMIDINE-NUCLEOSIDE (THYMIDINE) PHOSPHORYLASE | A | 423 | 3192 | 0 |
2 | Protein | PYRIMIDINE-NUCLEOSIDE (THYMIDINE) PHOSPHORYLASE | B | 423 | 3192 | 0 |
3 | Ligand | PYRIMIDINE-NUCLEOSIDE (THYMIDINE) PHOSPHORYLASE | A | 1 | 0 | 1 |
4 | Ligand | PYRIMIDINE-NUCLEOSIDE (THYMIDINE) PHOSPHORYLASE | B | 1 | 0 | 1 |
5 | Water | 830 | 0 | 830 | ||
total | 1678 | 6384 | 832 |
Unit 1 | MET1 ASN2 PRO3 VAL4 ALA5 PHE6 ILE7 ARG8 GLU9 LYS10 ARG11 GLU12 GLY13 LYS14 LYS15 HIS16 ARG17 ARG18 GLU19 ASP20 LEU21 GLU22 ALA23 PHE24 LEU25 LEU26 GLY27 TYR28 LEU29 ARG30 ASP31 GLU32 VAL33 PRO34 ASP35 TYR36 GLN37 VAL38 SER39 ALA40 TRP41 LEU42 MET43 ALA44 ALA45 PHE46 LEU47 ARG48 GLY49 LEU50 ASP51 PRO52 GLU53 GLU54 THR55 LEU56 TRP57 LEU58 THR59 GLU60 THR61 MET62 ALA63 ARG64 SER65 GLY66 LYS67 VAL68 LEU69 ASP70 LEU71 SER72 GLY73 LEU74 PRO75 HIS76 PRO77 VAL78 ASP79 LYS80 HIS81 SER82 SER83 GLY84 GLY85 VAL86 GLY87 ASP88 LYS89 VAL90 SER91 LEU92 VAL93 VAL94 GLY95 PRO96 ILE97 LEU98 ALA99 ALA100 SER101 GLY102 CYS103 THR104 PHE105 ALA106 LYS107 MET108 SER109 GLY110 ARG111 GLY112 LEU113 ALA114 HIS115 THR116 GLY117 GLY118 THR119 ILE120 ASP121 LYS122 LEU123 GLU124 SER125 VAL126 PRO127 GLY128 TRP129 ARG130 GLY131 GLU132 MET133 THR134 GLU135 ALA136 GLU137 PHE138 LEU139 GLU140 ARG141 ALA142 ARG143 ARG144 VAL145 GLY146 LEU147 VAL148 ILE149 ALA150 ALA151 GLN152 SER153 PRO154 ASP155 LEU156 ALA157 PRO158 LEU159 ASP160 GLY161 LYS162 LEU163 TYR164 ALA165 LEU166 ARG167 ASP168 VAL169 THR170 ALA171 THR172 VAL173 GLU174 SER175 VAL176 PRO177 LEU178 ILE179 ALA180 SER181 SER182 ILE183 MET184 SER185 LYS186 LYS187 LEU188 ALA189 ALA190 GLY191 ALA192 ARG193 SER194 ILE195 VAL196 LEU197 ASP198 VAL199 LYS200 VAL201 GLY202 ARG203 GLY204 ALA205 PHE206 MET207 LYS208 THR209 LEU210 GLU211 GLU212 ALA213 ARG214 LEU215 LEU216 ALA217 LYS218 THR219 MET220 VAL221 ALA222 ILE223 GLY224 GLN225 GLY226 ALA227 GLY228 ARG229 ARG230 VAL231 ARG232 ALA233 LEU234 LEU235 THR236 SER237 MET238 GLU239 ALA240 PRO241 LEU242 GLY243 ARG244 ALA245 VAL246 GLY247 ASN248 ALA249 ILE250 GLU251 VAL252 ARG253 GLU254 ALA255 ILE256 GLU257 ALA258 LEU259 LYS260 GLY261 GLU262 GLY263 PRO264 GLY265 ASP266 LEU267 LEU268 GLU269 VAL270 ALA271 LEU272 ALA273 LEU274 ALA275 GLU276 GLU277 ALA278 LEU279 ARG280 LEU281 GLU282 GLY283 LEU284 ASP285 PRO286 ALA287 LEU288 ALA289 ARG290 LYS291 ALA292 LEU293 GLU294 GLY295 GLY296 ALA297 ALA298 LEU299 GLU300 LYS301 PHE302 ARG303 ALA304 PHE305 LEU306 GLU307 ALA308 GLN309 GLY310 GLY311 ASP312 PRO313 ARG314 ALA315 VAL316 GLU317 ASP318 PHE319 SER320 LEU321 LEU322 PRO323 LEU324 ALA325 GLU326 GLU327 HIS328 PRO329 LEU330 ARG331 ALA332 GLU333 ARG334 GLU335 GLY336 VAL337 VAL338 ARG339 GLU340 VAL341 ASP342 ALA343 TYR344 LYS345 VAL346 GLY347 LEU348 ALA349 VAL350 LEU351 ALA352 LEU353 GLY354 GLY355 GLY356 ARG357 LYS358 ARG359 LYS360 GLY361 GLU362 PRO363 ILE364 ASP365 HIS366 GLY367 VAL368 GLY369 VAL370 TYR371 LEU372 LEU373 LYS374 LYS375 PRO376 GLY377 ASP378 ARG379 VAL380 GLU381 ARG382 GLY383 GLU384 ALA385 LEU386 ALA387 LEU388 VAL389 TYR390 HIS391 ARG392 ARG393 ARG394 GLY395 LEU396 GLU397 GLU398 ALA399 LEU400 GLY401 HIS402 LEU403 ARG404 GLU405 ALA406 TYR407 ALA408 LEU409 GLY410 GLU411 GLU412 ALA413 HIS414 PRO415 ALA416 PRO417 LEU418 VAL419 LEU420 GLU421 ALA422 ILE423 |
Unit 2 | MET1 ASN2 PRO3 VAL4 ALA5 PHE6 ILE7 ARG8 GLU9 LYS10 ARG11 GLU12 GLY13 LYS14 LYS15 HIS16 ARG17 ARG18 GLU19 ASP20 LEU21 GLU22 ALA23 PHE24 LEU25 LEU26 GLY27 TYR28 LEU29 ARG30 ASP31 GLU32 VAL33 PRO34 ASP35 TYR36 GLN37 VAL38 SER39 ALA40 TRP41 LEU42 MET43 ALA44 ALA45 PHE46 LEU47 ARG48 GLY49 LEU50 ASP51 PRO52 GLU53 GLU54 THR55 LEU56 TRP57 LEU58 THR59 GLU60 THR61 MET62 ALA63 ARG64 SER65 GLY66 LYS67 VAL68 LEU69 ASP70 LEU71 SER72 GLY73 LEU74 PRO75 HIS76 PRO77 VAL78 ASP79 LYS80 HIS81 SER82 SER83 GLY84 GLY85 VAL86 GLY87 ASP88 LYS89 VAL90 SER91 LEU92 VAL93 VAL94 GLY95 PRO96 ILE97 LEU98 ALA99 ALA100 SER101 GLY102 CYS103 THR104 PHE105 ALA106 LYS107 MET108 SER109 GLY110 ARG111 GLY112 LEU113 ALA114 HIS115 THR116 GLY117 GLY118 THR119 ILE120 ASP121 LYS122 LEU123 GLU124 SER125 VAL126 PRO127 GLY128 TRP129 ARG130 GLY131 GLU132 MET133 THR134 GLU135 ALA136 GLU137 PHE138 LEU139 GLU140 ARG141 ALA142 ARG143 ARG144 VAL145 GLY146 LEU147 VAL148 ILE149 ALA150 ALA151 GLN152 SER153 PRO154 ASP155 LEU156 ALA157 PRO158 LEU159 ASP160 GLY161 LYS162 LEU163 TYR164 ALA165 LEU166 ARG167 ASP168 VAL169 THR170 ALA171 THR172 VAL173 GLU174 SER175 VAL176 PRO177 LEU178 ILE179 ALA180 SER181 SER182 ILE183 MET184 SER185 LYS186 LYS187 LEU188 ALA189 ALA190 GLY191 ALA192 ARG193 SER194 ILE195 VAL196 LEU197 ASP198 VAL199 LYS200 VAL201 GLY202 ARG203 GLY204 ALA205 PHE206 MET207 LYS208 THR209 LEU210 GLU211 GLU212 ALA213 ARG214 LEU215 LEU216 ALA217 LYS218 THR219 MET220 VAL221 ALA222 ILE223 GLY224 GLN225 GLY226 ALA227 GLY228 ARG229 ARG230 VAL231 ARG232 ALA233 LEU234 LEU235 THR236 SER237 MET238 GLU239 ALA240 PRO241 LEU242 GLY243 ARG244 ALA245 VAL246 GLY247 ASN248 ALA249 ILE250 GLU251 VAL252 ARG253 GLU254 ALA255 ILE256 GLU257 ALA258 LEU259 LYS260 GLY261 GLU262 GLY263 PRO264 GLY265 ASP266 LEU267 LEU268 GLU269 VAL270 ALA271 LEU272 ALA273 LEU274 ALA275 GLU276 GLU277 ALA278 LEU279 ARG280 LEU281 GLU282 GLY283 LEU284 ASP285 PRO286 ALA287 LEU288 ALA289 ARG290 LYS291 ALA292 LEU293 GLU294 GLY295 GLY296 ALA297 ALA298 LEU299 GLU300 LYS301 PHE302 ARG303 ALA304 PHE305 LEU306 GLU307 ALA308 GLN309 GLY310 GLY311 ASP312 PRO313 ARG314 ALA315 VAL316 GLU317 ASP318 PHE319 SER320 LEU321 LEU322 PRO323 LEU324 ALA325 GLU326 GLU327 HIS328 PRO329 LEU330 ARG331 ALA332 GLU333 ARG334 GLU335 GLY336 VAL337 VAL338 ARG339 GLU340 VAL341 ASP342 ALA343 TYR344 LYS345 VAL346 GLY347 LEU348 ALA349 VAL350 LEU351 ALA352 LEU353 GLY354 GLY355 GLY356 ARG357 LYS358 ARG359 LYS360 GLY361 GLU362 PRO363 ILE364 ASP365 HIS366 GLY367 VAL368 GLY369 VAL370 TYR371 LEU372 LEU373 LYS374 LYS375 PRO376 GLY377 ASP378 ARG379 VAL380 GLU381 ARG382 GLY383 GLU384 ALA385 LEU386 ALA387 LEU388 VAL389 TYR390 HIS391 ARG392 ARG393 ARG394 GLY395 LEU396 GLU397 GLU398 ALA399 LEU400 GLY401 HIS402 LEU403 ARG404 GLU405 ALA406 TYR407 ALA408 LEU409 GLY410 GLU411 GLU412 ALA413 HIS414 PRO415 ALA416 PRO417 LEU418 VAL419 LEU420 GLU421 ALA422 ILE423 |
Unit 3 | CL1002 |
Unit 4 | CL1001 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |