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Title | CRYSTAL STRUCTURE OF THE REPLICATION TERMINATION PROTEIN IN COMPLEX WITH A PSEUDOSYMMETRIC B-SITE | |
Keywords | WINGED-HELIX PROTEIN-DNA COMPLEX, REPLICATION TERMINATION, FORK ARREST MECHANISM, DNA BINDING PROTEIN/DNA COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2DPD | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Other macromolecule | 5'- D(*CP*TP*AP*TP*GP*AP*AP*CP*AP*TP*AP*AP*TP*GP*TP*TP*CP*AP*TP *AP*G)-3' | D | 21 | 428 | 0 |
2 | Other macromolecule | 5'- D(*CP*TP*AP*TP*GP*AP*AP*CP*AP*TP*TP*AP*TP*GP*TP*TP*CP*AP*TP *AP*G)-3' | E | 21 | 427 | 0 |
3 | Protein | REPLICATION TERMINATION PROTEIN | A | 115 | 961 | 0 |
4 | Protein | REPLICATION TERMINATION PROTEIN | B | 117 | 978 | 0 |
5 | Water | 12 | 0 | 12 | ||
total | 286 | 2794 | 12 |
Unit 3 | SER8 THR9 GLY10 PHE11 LEU12 VAL13 LYS14 GLN15 ARG16 ALA17 PHE18 LEU19 LYS20 LEU21 TYR22 MET23 ILE24 THR25 MET26 THR27 GLU28 GLN29 GLU30 ARG31 LEU32 TYR33 GLY34 LEU35 LYS36 LEU37 LEU38 GLU39 VAL40 LEU41 ARG42 SER43 GLU44 PHE45 LYS46 GLU47 ILE48 GLY49 PHE50 LYS51 PRO52 ASN53 HIS54 THR55 GLU56 VAL57 TYR58 ARG59 SER60 LEU61 HIS62 GLU63 LEU64 LEU65 ASP66 ASP67 GLY68 ILE69 LEU70 LYS71 GLN72 ILE73 LYS74 VAL75 LYS76 LYS77 GLU78 GLY79 ALA80 LYS81 LEU82 GLN83 GLU84 VAL85 VAL86 LEU87 TYR88 GLN89 PHE90 LYS91 ASP92 TYR93 GLU94 ALA95 ALA96 LYS97 LEU98 TYR99 LYS100 LYS101 GLN102 LEU103 LYS104 VAL105 GLU106 LEU107 ASP108 ARG109 SER110 LYS111 LYS112 LEU113 ILE114 GLU115 LYS116 ALA117 LEU118 SER119 ASP120 ASN121 PHE122 |
Unit 4 | ARG6 SER7 SER8 THR9 GLY10 PHE11 LEU12 VAL13 LYS14 GLN15 ARG16 ALA17 PHE18 LEU19 LYS20 LEU21 TYR22 MET23 ILE24 THR25 MET26 THR27 GLU28 GLN29 GLU30 ARG31 LEU32 TYR33 GLY34 LEU35 LYS36 LEU37 LEU38 GLU39 VAL40 LEU41 ARG42 SER43 GLU44 PHE45 LYS46 GLU47 ILE48 GLY49 PHE50 LYS51 PRO52 ASN53 HIS54 THR55 GLU56 VAL57 TYR58 ARG59 SER60 LEU61 HIS62 GLU63 LEU64 LEU65 ASP66 ASP67 GLY68 ILE69 LEU70 LYS71 GLN72 ILE73 LYS74 VAL75 LYS76 LYS77 GLU78 GLY79 ALA80 LYS81 LEU82 GLN83 GLU84 VAL85 VAL86 LEU87 TYR88 GLN89 PHE90 LYS91 ASP92 TYR93 GLU94 ALA95 ALA96 LYS97 LEU98 TYR99 LYS100 LYS101 GLN102 LEU103 LYS104 VAL105 GLU106 LEU107 ASP108 ARG109 SER110 LYS111 LYS112 LEU113 ILE114 GLU115 LYS116 ALA117 LEU118 SER119 ASP120 ASN121 PHE122 |
Unit 1 | DC1 DT2 DA3 DT4 DG5 DA6 DA7 DC8 DA9 DT10 DA11 DA12 DT13 DG14 DT15 DT16 DC17 DA18 DT19 DA20 DG21 |
Unit 2 | DC1 DT2 DA3 DT4 DG5 DA6 DA7 DC8 DA9 DT10 DT11 DA12 DT13 DG14 DT15 DT16 DC17 DA18 DT19 DA20 DG21 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |