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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF DRP35, A 35KDA DRUG RESPONSIVE PROTEIN STAPHYLOCOCCUS AUREUS, COMPLEXED WITH CA2+
Keywords BETA PROPELLER, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2DG1     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DRP35  A 321 2511 0
2  Protein   DRP35  B 322 2520 0
3  Protein   DRP35  C 320 2503 0
4  Protein   DRP35  D 322 2520 0
5  Protein   DRP35  E 321 2511 0
6  Protein   DRP35  F 321 2511 0
7  Ligand   DRP35  A 4 0 14
8  Ligand   DRP35  B 4 0 14
9  Ligand   DRP35  C 4 0 14
10  Ligand   DRP35  D 4 0 14
11  Ligand   DRP35  E 4 0 14
12  Ligand   DRP35  F 4 0 14
13 Water     2141 0 2141
total       4092 15076 2225

Proteins
Unit 1 GLN6 ASP7 LEU8 PRO9 THR10 LEU11 PHE12 TYR13 SER14 GLY15 LYS16 SER17 ASN18 SER19 ALA20 VAL21 PRO22 ILE23 ILE24 SER25 GLU26 SER27 GLU28 LEU29 GLN30 THR31 ILE32 THR33 ALA34 GLU35 PRO36 TRP37 LEU38 GLU39 ILE40 SER41 LYS42 LYS43 GLY44 LEU45 GLN46 LEU47 GLU48 GLY49 LEU50 ASN51 PHE52 ASP53 ARG54 GLN55 GLY56 GLN57 LEU58 PHE59 LEU60 LEU61 ASP62 VAL63 PHE64 GLU65 GLY66 ASN67 ILE68 PHE69 LYS70 ILE71 ASN72 PRO73 GLU74 THR75 LYS76 GLU77 ILE78 LYS79 ARG80 PRO81 PHE82 VAL83 SER84 HIS85 LYS86 ALA87 ASN88 PRO89 ALA90 ALA91 ILE92 LYS93 ILE94 HIS95 LYS96 ASP97 GLY98 ARG99 LEU100 PHE101 VAL102 CYS103 TYR104 LEU105 GLY106 ASP107 PHE108 LYS109 SER110 THR111 GLY112 GLY113 ILE114 PHE115 ALA116 ALA117 THR118 GLU119 ASN120 GLY121 ASP122 ASN123 LEU124 GLN125 ASP126 ILE127 ILE128 GLU129 ASP130 LEU131 SER132 THR133 ALA134 TYR135 CYS136 ILE137 ASP138 ASP139 MET140 VAL141 PHE142 ASP143 SER144 LYS145 GLY146 GLY147 PHE148 TYR149 PHE150 THR151 ASP152 PHE153 ARG154 GLY155 TYR156 SER157 THR158 ASN159 PRO160 LEU161 GLY162 GLY163 VAL164 TYR165 TYR166 VAL167 SER168 PRO169 ASP170 PHE171 ARG172 THR173 VAL174 THR175 PRO176 ILE177 ILE178 GLN179 ASN180 ILE181 SER182 VAL183 ALA184 ASN185 GLY186 ILE187 ALA188 LEU189 SER190 THR191 ASP192 GLU193 LYS194 VAL195 LEU196 TRP197 VAL198 THR199 GLU200 THR201 THR202 ALA203 ASN204 ARG205 LEU206 HIS207 ARG208 ILE209 ALA210 LEU211 GLU212 ASP213 ASP214 GLY215 VAL216 THR217 ILE218 GLN219 PRO220 PHE221 GLY222 ALA223 THR224 ILE225 PRO226 TYR227 TYR228 PHE229 THR230 GLY231 HIS232 GLU233 GLY234 PRO235 ASP236 SER237 CYS238 CYS239 ILE240 ASP241 SER242 ASP243 ASP244 ASN245 LEU246 TYR247 VAL248 ALA249 MET250 TYR251 GLY252 GLN253 GLY254 ARG255 VAL256 LEU257 VAL258 PHE259 ASN260 LYS261 ARG262 GLY263 TYR264 PRO265 ILE266 GLY267 GLN268 ILE269 LEU270 ILE271 PRO272 GLY273 ARG274 ASP275 GLU276 GLY277 HIS278 MET279 LEU280 ARG281 SER282 THR283 HIS284 PRO285 GLN286 PHE287 ILE288 PRO289 GLY290 THR291 ASN292 GLN293 LEU294 ILE295 ILE296 CYS297 SER298 ASN299 ASP300 ILE301 GLU302 MET303 GLY304 GLY305 GLY306 SER307 MET308 LEU309 TYR310 THR311 VAL312 ASN313 GLY314 PHE315 ALA316 LYS317 GLY318 HIS319 GLN320 SER321 PHE322 GLN323 PHE324 GLN325 LEU326
Unit 2 GLN6 ASP7 LEU8 PRO9 THR10 LEU11 PHE12 TYR13 SER14 GLY15 LYS16 SER17 ASN18 SER19 ALA20 VAL21 PRO22 ILE23 ILE24 SER25 GLU26 SER27 GLU28 LEU29 GLN30 THR31 ILE32 THR33 ALA34 GLU35 PRO36 TRP37 LEU38 GLU39 ILE40 SER41 LYS42 LYS43 GLY44 LEU45 GLN46 LEU47 GLU48 GLY49 LEU50 ASN51 PHE52 ASP53 ARG54 GLN55 GLY56 GLN57 LEU58 PHE59 LEU60 LEU61 ASP62 VAL63 PHE64 GLU65 GLY66 ASN67 ILE68 PHE69 LYS70 ILE71 ASN72 PRO73 GLU74 THR75 LYS76 GLU77 ILE78 LYS79 ARG80 PRO81 PHE82 VAL83 SER84 HIS85 LYS86 ALA87 ASN88 PRO89 ALA90 ALA91 ILE92 LYS93 ILE94 HIS95 LYS96 ASP97 GLY98 ARG99 LEU100 PHE101 VAL102 CYS103 TYR104 LEU105 GLY106 ASP107 PHE108 LYS109 SER110 THR111 GLY112 GLY113 ILE114 PHE115 ALA116 ALA117 THR118 GLU119 ASN120 GLY121 ASP122 ASN123 LEU124 GLN125 ASP126 ILE127 ILE128 GLU129 ASP130 LEU131 SER132 THR133 ALA134 TYR135 CYS136 ILE137 ASP138 ASP139 MET140 VAL141 PHE142 ASP143 SER144 LYS145 GLY146 GLY147 PHE148 TYR149 PHE150 THR151 ASP152 PHE153 ARG154 GLY155 TYR156 SER157 THR158 ASN159 PRO160 LEU161 GLY162 GLY163 VAL164 TYR165 TYR166 VAL167 SER168 PRO169 ASP170 PHE171 ARG172 THR173 VAL174 THR175 PRO176 ILE177 ILE178 GLN179 ASN180 ILE181 SER182 VAL183 ALA184 ASN185 GLY186 ILE187 ALA188 LEU189 SER190 THR191 ASP192 GLU193 LYS194 VAL195 LEU196 TRP197 VAL198 THR199 GLU200 THR201 THR202 ALA203 ASN204 ARG205 LEU206 HIS207 ARG208 ILE209 ALA210 LEU211 GLU212 ASP213 ASP214 GLY215 VAL216 THR217 ILE218 GLN219 PRO220 PHE221 GLY222 ALA223 THR224 ILE225 PRO226 TYR227 TYR228 PHE229 THR230 GLY231 HIS232 GLU233 GLY234 PRO235 ASP236 SER237 CYS238 CYS239 ILE240 ASP241 SER242 ASP243 ASP244 ASN245 LEU246 TYR247 VAL248 ALA249 MET250 TYR251 GLY252 GLN253 GLY254 ARG255 VAL256 LEU257 VAL258 PHE259 ASN260 LYS261 ARG262 GLY263 TYR264 PRO265 ILE266 GLY267 GLN268 ILE269 LEU270 ILE271 PRO272 GLY273 ARG274 ASP275 GLU276 GLY277 HIS278 MET279 LEU280 ARG281 SER282 THR283 HIS284 PRO285 GLN286 PHE287 ILE288 PRO289 GLY290 THR291 ASN292 GLN293 LEU294 ILE295 ILE296 CYS297 SER298 ASN299 ASP300 ILE301 GLU302 MET303 GLY304 GLY305 GLY306 SER307 MET308 LEU309 TYR310 THR311 VAL312 ASN313 GLY314 PHE315 ALA316 LYS317 GLY318 HIS319 GLN320 SER321 PHE322 GLN323 PHE324 GLN325 LEU326 GLU327
Unit 3 GLN6 ASP7 LEU8 PRO9 THR10 LEU11 PHE12 TYR13 SER14 GLY15 LYS16 SER17 ASN18 SER19 ALA20 VAL21 PRO22 ILE23 ILE24 SER25 GLU26 SER27 GLU28 LEU29 GLN30 THR31 ILE32 THR33 ALA34 GLU35 PRO36 TRP37 LEU38 GLU39 ILE40 SER41 LYS42 LYS43 GLY44 LEU45 GLN46 LEU47 GLU48 GLY49 LEU50 ASN51 PHE52 ASP53 ARG54 GLN55 GLY56 GLN57 LEU58 PHE59 LEU60 LEU61 ASP62 VAL63 PHE64 GLU65 GLY66 ASN67 ILE68 PHE69 LYS70 ILE71 ASN72 PRO73 GLU74 THR75 LYS76 GLU77 ILE78 LYS79 ARG80 PRO81 PHE82 VAL83 SER84 HIS85 LYS86 ALA87 ASN88 PRO89 ALA90 ALA91 ILE92 LYS93 ILE94 HIS95 LYS96 ASP97 GLY98 ARG99 LEU100 PHE101 VAL102 CYS103 TYR104 LEU105 GLY106 ASP107 PHE108 LYS109 SER110 THR111 GLY112 GLY113 ILE114 PHE115 ALA116 ALA117 THR118 GLU119 ASN120 GLY121 ASP122 ASN123 LEU124 GLN125 ASP126 ILE127 ILE128 GLU129 ASP130 LEU131 SER132 THR133 ALA134 TYR135 CYS136 ILE137 ASP138 ASP139 MET140 VAL141 PHE142 ASP143 SER144 LYS145 GLY146 GLY147 PHE148 TYR149 PHE150 THR151 ASP152 PHE153 ARG154 GLY155 TYR156 SER157 THR158 ASN159 PRO160 LEU161 GLY162 GLY163 VAL164 TYR165 TYR166 VAL167 SER168 PRO169 ASP170 PHE171 ARG172 THR173 VAL174 THR175 PRO176 ILE177 ILE178 GLN179 ASN180 ILE181 SER182 VAL183 ALA184 ASN185 GLY186 ILE187 ALA188 LEU189 SER190 THR191 ASP192 GLU193 LYS194 VAL195 LEU196 TRP197 VAL198 THR199 GLU200 THR201 THR202 ALA203 ASN204 ARG205 LEU206 HIS207 ARG208 ILE209 ALA210 LEU211 GLU212 ASP213 ASP214 GLY215 VAL216 THR217 ILE218 GLN219 PRO220 PHE221 GLY222 ALA223 THR224 ILE225 PRO226 TYR227 TYR228 PHE229 THR230 GLY231 HIS232 GLU233 GLY234 PRO235 ASP236 SER237 CYS238 CYS239 ILE240 ASP241 SER242 ASP243 ASP244 ASN245 LEU246 TYR247 VAL248 ALA249 MET250 TYR251 GLY252 GLN253 GLY254 ARG255 VAL256 LEU257 VAL258 PHE259 ASN260 LYS261 ARG262 GLY263 TYR264 PRO265 ILE266 GLY267 GLN268 ILE269 LEU270 ILE271 PRO272 GLY273 ARG274 ASP275 GLU276 GLY277 HIS278 MET279 LEU280 ARG281 SER282 THR283 HIS284 PRO285 GLN286 PHE287 ILE288 PRO289 GLY290 THR291 ASN292 GLN293 LEU294 ILE295 ILE296 CYS297 SER298 ASN299 ASP300 ILE301 GLU302 MET303 GLY304 GLY305 GLY306 SER307 MET308 LEU309 TYR310 THR311 VAL312 ASN313 GLY314 PHE315 ALA316 LYS317 GLY318 HIS319 GLN320 SER321 PHE322 GLN323 PHE324 GLN325
Unit 4 GLN5 GLN6 ASP7 LEU8 PRO9 THR10 LEU11 PHE12 TYR13 SER14 GLY15 LYS16 SER17 ASN18 SER19 ALA20 VAL21 PRO22 ILE23 ILE24 SER25 GLU26 SER27 GLU28 LEU29 GLN30 THR31 ILE32 THR33 ALA34 GLU35 PRO36 TRP37 LEU38 GLU39 ILE40 SER41 LYS42 LYS43 GLY44 LEU45 GLN46 LEU47 GLU48 GLY49 LEU50 ASN51 PHE52 ASP53 ARG54 GLN55 GLY56 GLN57 LEU58 PHE59 LEU60 LEU61 ASP62 VAL63 PHE64 GLU65 GLY66 ASN67 ILE68 PHE69 LYS70 ILE71 ASN72 PRO73 GLU74 THR75 LYS76 GLU77 ILE78 LYS79 ARG80 PRO81 PHE82 VAL83 SER84 HIS85 LYS86 ALA87 ASN88 PRO89 ALA90 ALA91 ILE92 LYS93 ILE94 HIS95 LYS96 ASP97 GLY98 ARG99 LEU100 PHE101 VAL102 CYS103 TYR104 LEU105 GLY106 ASP107 PHE108 LYS109 SER110 THR111 GLY112 GLY113 ILE114 PHE115 ALA116 ALA117 THR118 GLU119 ASN120 GLY121 ASP122 ASN123 LEU124 GLN125 ASP126 ILE127 ILE128 GLU129 ASP130 LEU131 SER132 THR133 ALA134 TYR135 CYS136 ILE137 ASP138 ASP139 MET140 VAL141 PHE142 ASP143 SER144 LYS145 GLY146 GLY147 PHE148 TYR149 PHE150 THR151 ASP152 PHE153 ARG154 GLY155 TYR156 SER157 THR158 ASN159 PRO160 LEU161 GLY162 GLY163 VAL164 TYR165 TYR166 VAL167 SER168 PRO169 ASP170 PHE171 ARG172 THR173 VAL174 THR175 PRO176 ILE177 ILE178 GLN179 ASN180 ILE181 SER182 VAL183 ALA184 ASN185 GLY186 ILE187 ALA188 LEU189 SER190 THR191 ASP192 GLU193 LYS194 VAL195 LEU196 TRP197 VAL198 THR199 GLU200 THR201 THR202 ALA203 ASN204 ARG205 LEU206 HIS207 ARG208 ILE209 ALA210 LEU211 GLU212 ASP213 ASP214 GLY215 VAL216 THR217 ILE218 GLN219 PRO220 PHE221 GLY222 ALA223 THR224 ILE225 PRO226 TYR227 TYR228 PHE229 THR230 GLY231 HIS232 GLU233 GLY234 PRO235 ASP236 SER237 CYS238 CYS239 ILE240 ASP241 SER242 ASP243 ASP244 ASN245 LEU246 TYR247 VAL248 ALA249 MET250 TYR251 GLY252 GLN253 GLY254 ARG255 VAL256 LEU257 VAL258 PHE259 ASN260 LYS261 ARG262 GLY263 TYR264 PRO265 ILE266 GLY267 GLN268 ILE269 LEU270 ILE271 PRO272 GLY273 ARG274 ASP275 GLU276 GLY277 HIS278 MET279 LEU280 ARG281 SER282 THR283 HIS284 PRO285 GLN286 PHE287 ILE288 PRO289 GLY290 THR291 ASN292 GLN293 LEU294 ILE295 ILE296 CYS297 SER298 ASN299 ASP300 ILE301 GLU302 MET303 GLY304 GLY305 GLY306 SER307 MET308 LEU309 TYR310 THR311 VAL312 ASN313 GLY314 PHE315 ALA316 LYS317 GLY318 HIS319 GLN320 SER321 PHE322 GLN323 PHE324 GLN325 LEU326
Unit 5 GLN6 ASP7 LEU8 PRO9 THR10 LEU11 PHE12 TYR13 SER14 GLY15 LYS16 SER17 ASN18 SER19 ALA20 VAL21 PRO22 ILE23 ILE24 SER25 GLU26 SER27 GLU28 LEU29 GLN30 THR31 ILE32 THR33 ALA34 GLU35 PRO36 TRP37 LEU38 GLU39 ILE40 SER41 LYS42 LYS43 GLY44 LEU45 GLN46 LEU47 GLU48 GLY49 LEU50 ASN51 PHE52 ASP53 ARG54 GLN55 GLY56 GLN57 LEU58 PHE59 LEU60 LEU61 ASP62 VAL63 PHE64 GLU65 GLY66 ASN67 ILE68 PHE69 LYS70 ILE71 ASN72 PRO73 GLU74 THR75 LYS76 GLU77 ILE78 LYS79 ARG80 PRO81 PHE82 VAL83 SER84 HIS85 LYS86 ALA87 ASN88 PRO89 ALA90 ALA91 ILE92 LYS93 ILE94 HIS95 LYS96 ASP97 GLY98 ARG99 LEU100 PHE101 VAL102 CYS103 TYR104 LEU105 GLY106 ASP107 PHE108 LYS109 SER110 THR111 GLY112 GLY113 ILE114 PHE115 ALA116 ALA117 THR118 GLU119 ASN120 GLY121 ASP122 ASN123 LEU124 GLN125 ASP126 ILE127 ILE128 GLU129 ASP130 LEU131 SER132 THR133 ALA134 TYR135 CYS136 ILE137 ASP138 ASP139 MET140 VAL141 PHE142 ASP143 SER144 LYS145 GLY146 GLY147 PHE148 TYR149 PHE150 THR151 ASP152 PHE153 ARG154 GLY155 TYR156 SER157 THR158 ASN159 PRO160 LEU161 GLY162 GLY163 VAL164 TYR165 TYR166 VAL167 SER168 PRO169 ASP170 PHE171 ARG172 THR173 VAL174 THR175 PRO176 ILE177 ILE178 GLN179 ASN180 ILE181 SER182 VAL183 ALA184 ASN185 GLY186 ILE187 ALA188 LEU189 SER190 THR191 ASP192 GLU193 LYS194 VAL195 LEU196 TRP197 VAL198 THR199 GLU200 THR201 THR202 ALA203 ASN204 ARG205 LEU206 HIS207 ARG208 ILE209 ALA210 LEU211 GLU212 ASP213 ASP214 GLY215 VAL216 THR217 ILE218 GLN219 PRO220 PHE221 GLY222 ALA223 THR224 ILE225 PRO226 TYR227 TYR228 PHE229 THR230 GLY231 HIS232 GLU233 GLY234 PRO235 ASP236 SER237 CYS238 CYS239 ILE240 ASP241 SER242 ASP243 ASP244 ASN245 LEU246 TYR247 VAL248 ALA249 MET250 TYR251 GLY252 GLN253 GLY254 ARG255 VAL256 LEU257 VAL258 PHE259 ASN260 LYS261 ARG262 GLY263 TYR264 PRO265 ILE266 GLY267 GLN268 ILE269 LEU270 ILE271 PRO272 GLY273 ARG274 ASP275 GLU276 GLY277 HIS278 MET279 LEU280 ARG281 SER282 THR283 HIS284 PRO285 GLN286 PHE287 ILE288 PRO289 GLY290 THR291 ASN292 GLN293 LEU294 ILE295 ILE296 CYS297 SER298 ASN299 ASP300 ILE301 GLU302 MET303 GLY304 GLY305 GLY306 SER307 MET308 LEU309 TYR310 THR311 VAL312 ASN313 GLY314 PHE315 ALA316 LYS317 GLY318 HIS319 GLN320 SER321 PHE322 GLN323 PHE324 GLN325 LEU326
Unit 6 GLN6 ASP7 LEU8 PRO9 THR10 LEU11 PHE12 TYR13 SER14 GLY15 LYS16 SER17 ASN18 SER19 ALA20 VAL21 PRO22 ILE23 ILE24 SER25 GLU26 SER27 GLU28 LEU29 GLN30 THR31 ILE32 THR33 ALA34 GLU35 PRO36 TRP37 LEU38 GLU39 ILE40 SER41 LYS42 LYS43 GLY44 LEU45 GLN46 LEU47 GLU48 GLY49 LEU50 ASN51 PHE52 ASP53 ARG54 GLN55 GLY56 GLN57 LEU58 PHE59 LEU60 LEU61 ASP62 VAL63 PHE64 GLU65 GLY66 ASN67 ILE68 PHE69 LYS70 ILE71 ASN72 PRO73 GLU74 THR75 LYS76 GLU77 ILE78 LYS79 ARG80 PRO81 PHE82 VAL83 SER84 HIS85 LYS86 ALA87 ASN88 PRO89 ALA90 ALA91 ILE92 LYS93 ILE94 HIS95 LYS96 ASP97 GLY98 ARG99 LEU100 PHE101 VAL102 CYS103 TYR104 LEU105 GLY106 ASP107 PHE108 LYS109 SER110 THR111 GLY112 GLY113 ILE114 PHE115 ALA116 ALA117 THR118 GLU119 ASN120 GLY121 ASP122 ASN123 LEU124 GLN125 ASP126 ILE127 ILE128 GLU129 ASP130 LEU131 SER132 THR133 ALA134 TYR135 CYS136 ILE137 ASP138 ASP139 MET140 VAL141 PHE142 ASP143 SER144 LYS145 GLY146 GLY147 PHE148 TYR149 PHE150 THR151 ASP152 PHE153 ARG154 GLY155 TYR156 SER157 THR158 ASN159 PRO160 LEU161 GLY162 GLY163 VAL164 TYR165 TYR166 VAL167 SER168 PRO169 ASP170 PHE171 ARG172 THR173 VAL174 THR175 PRO176 ILE177 ILE178 GLN179 ASN180 ILE181 SER182 VAL183 ALA184 ASN185 GLY186 ILE187 ALA188 LEU189 SER190 THR191 ASP192 GLU193 LYS194 VAL195 LEU196 TRP197 VAL198 THR199 GLU200 THR201 THR202 ALA203 ASN204 ARG205 LEU206 HIS207 ARG208 ILE209 ALA210 LEU211 GLU212 ASP213 ASP214 GLY215 VAL216 THR217 ILE218 GLN219 PRO220 PHE221 GLY222 ALA223 THR224 ILE225 PRO226 TYR227 TYR228 PHE229 THR230 GLY231 HIS232 GLU233 GLY234 PRO235 ASP236 SER237 CYS238 CYS239 ILE240 ASP241 SER242 ASP243 ASP244 ASN245 LEU246 TYR247 VAL248 ALA249 MET250 TYR251 GLY252 GLN253 GLY254 ARG255 VAL256 LEU257 VAL258 PHE259 ASN260 LYS261 ARG262 GLY263 TYR264 PRO265 ILE266 GLY267 GLN268 ILE269 LEU270 ILE271 PRO272 GLY273 ARG274 ASP275 GLU276 GLY277 HIS278 MET279 LEU280 ARG281 SER282 THR283 HIS284 PRO285 GLN286 PHE287 ILE288 PRO289 GLY290 THR291 ASN292 GLN293 LEU294 ILE295 ILE296 CYS297 SER298 ASN299 ASP300 ILE301 GLU302 MET303 GLY304 GLY305 GLY306 SER307 MET308 LEU309 TYR310 THR311 VAL312 ASN313 GLY314 PHE315 ALA316 LYS317 GLY318 HIS319 GLN320 SER321 PHE322 GLN323 PHE324 GLN325 LEU326

Ligands
Unit 7 CA3001 CA3007 GOL5001 GOL5007
Unit 8 CA3002 CA3008 GOL5002 GOL5008
Unit 9 CA3003 CA3009 GOL5003 GOL5009
Unit 10 CA3004 CA3010 GOL5004 GOL5010
Unit 11 CA3005 CA3011 GOL5005 GOL5011
Unit 12 CA3006 CA3012 GOL5006 GOL5012

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany