2DFY - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF A CYCLIZED PROTEIN FUSION OF LMO4 LIM D AND 2 WITH THE LIM INTERACTING DOMAIN OF LDB1
• Keywords: ZINC FINGER, LIM ONLY PROTEIN, LIM DOMAIN, CIRCULAR PROTEIN, TRANSCRIPTION
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2DFY	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	FUSION PROTEIN OF LIM DOMAIN TRANSCRIPTION FACTOR LIM DOMAIN-BINDING PROTEIN 1	X	158	1210	0
2	Protein	FUSION PROTEIN OF LIM DOMAIN TRANSCRIPTION FACTOR LIM DOMAIN-BINDING PROTEIN 1	C	158	1210	0
3	Ligand	FUSION PROTEIN OF LIM DOMAIN TRANSCRIPTION FACTOR LIM DOMAIN-BINDING PROTEIN 1	X	5	0	10
4	Ligand	FUSION PROTEIN OF LIM DOMAIN TRANSCRIPTION FACTOR LIM DOMAIN-BINDING PROTEIN 1	C	5	0	10
5	Water			244	0	244
total				570	2420	264

Proteins

Unit 1

SER 19 TRP 20 LYS 21 ARG 22 CYS 23 ALA 24 GLY 25 CYS 26 GLY 27 GLY 28 LYS 29 ILE 30 ALA 31 ASP 32 ARG 33 PHE 34 LEU 35 LEU 36 TYR 37 ALA 38 MET 39 ASP 40 SER 41 TYR 42 TRP 43 HIS 44 SER 45 ARG 46 CYS 47 LEU 48 LYS 49 CYS 50 SER 51 SER 52 CYS 53 GLN 54 ALA 55 GLN 56 LEU 57 GLY 58 ASP 59 ILE 60 GLY 61 THR 62 SER 63 SER 64 TYR 65 THR 66 LYS 67 SER 68 GLY 69 MET 70 ILE 71 LEU 72 CYS 73 ARG 74 ASN 75 ASP 76 TYR 77 ILE 78 ARG 79 LEU 80 PHE 81 GLY 82 ASN 83 SER 84 GLY 85 ALA 86 CYS 87 SER 88 ALA 89 CYS 90 GLY 91 GLN 92 SER 93 ILE 94 PRO 95 ALA 96 SER 97 GLU 98 LEU 99 VAL 100 MET 101 ARG 102 ALA 103 GLN 104 GLY 105 ASN 106 VAL 107 TYR 108 HIS 109 LEU 110 LYS 111 CYS 112 PHE 113 THR 114 CYS 115 SER 116 THR 117 CYS 118 ARG 119 ASN 120 ARG 121 LEU 122 VAL 123 PRO 124 GLY 125 ASP 126 ARG 127 PHE 128 HIS 129 TYR 130 ILE 131 ASN 132 GLY 133 SER 134 LEU 135 PHE 136 CYS 137 GLU 138 HIS 139 ASP 140 ARG 141 PRO 142 THR 143 ALA 144 LEU 145 ILE 146 GLY 298 GLY 299 ASP 300 VAL 301 MET 302 VAL 303 VAL 304 GLY 305 GLU 306 PRO 307 THR 308 LEU 309 MET 310 GLY 311 GLY 312 GLU 313 PHE 314 GLY 315 ASP 316 GLU 317 ASP 318 GLU 319 ARG 320 LEU 321 ILE 322 THR 323 ARG 324 LEU 325 GLU 326 ASN 327

Unit 2

SER 19 TRP 20 LYS 21 ARG 22 CYS 23 ALA 24 GLY 25 CYS 26 GLY 27 GLY 28 LYS 29 ILE 30 ALA 31 ASP 32 ARG 33 PHE 34 LEU 35 LEU 36 TYR 37 ALA 38 MET 39 ASP 40 SER 41 TYR 42 TRP 43 HIS 44 SER 45 ARG 46 CYS 47 LEU 48 LYS 49 CYS 50 SER 51 SER 52 CYS 53 GLN 54 ALA 55 GLN 56 LEU 57 GLY 58 ASP 59 ILE 60 GLY 61 THR 62 SER 63 SER 64 TYR 65 THR 66 LYS 67 SER 68 GLY 69 MET 70 ILE 71 LEU 72 CYS 73 ARG 74 ASN 75 ASP 76 TYR 77 ILE 78 ARG 79 LEU 80 PHE 81 GLY 82 ASN 83 SER 84 GLY 85 ALA 86 CYS 87 SER 88 ALA 89 CYS 90 GLY 91 GLN 92 SER 93 ILE 94 PRO 95 ALA 96 SER 97 GLU 98 LEU 99 VAL 100 MET 101 ARG 102 ALA 103 GLN 104 GLY 105 ASN 106 VAL 107 TYR 108 HIS 109 LEU 110 LYS 111 CYS 112 PHE 113 THR 114 CYS 115 SER 116 THR 117 CYS 118 ARG 119 ASN 120 ARG 121 LEU 122 VAL 123 PRO 124 GLY 125 ASP 126 ARG 127 PHE 128 HIS 129 TYR 130 ILE 131 ASN 132 GLY 133 SER 134 LEU 135 PHE 136 CYS 137 GLU 138 HIS 139 ASP 140 ARG 141 PRO 142 THR 143 ALA 144 LEU 145 ILE 146 GLY 298 GLY 299 ASP 300 VAL 301 MET 302 VAL 303 VAL 304 GLY 305 GLU 306 PRO 307 THR 308 LEU 309 MET 310 GLY 311 GLY 312 GLU 313 PHE 314 GLY 315 ASP 316 GLU 317 ASP 318 GLU 319 ARG 320 LEU 321 ILE 322 THR 323 ARG 324 LEU 325 GLU 326 ASN 327

Ligands

Unit 3	GOL 502 ZN 601 ZN 602 ZN 603 ZN 604
Unit 4	GOL 501 ZN 601 ZN 602 ZN 603 ZN 604