2DF8 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE PH0510 PROTEIN FROM PYROCOCCUS HORI IN COMPLEX WITH BETA-D-FRUCTOPYRANOSE-1-PHOSPHATE
• Keywords: STRUCTURAL GENOMICS, SUGAR BINDING PROTEIN, NPPSFA, NATIONAL ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCT GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2DF8	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	325AA LONG HYPOTHETICAL PROTEIN	A	325	2595	0
2	Protein	325AA LONG HYPOTHETICAL PROTEIN	B	324	2587	0
3	Ligand	325AA LONG HYPOTHETICAL PROTEIN	A	3	0	24
4	Ligand	325AA LONG HYPOTHETICAL PROTEIN	B	2	0	20
5	Water			785	0	785
total				1439	5182	829

Proteins

Unit 1

MET 1 LYS 2 THR 3 LEU 4 ILE 5 GLU 6 ILE 7 LYS 8 GLN 9 THR 10 PRO 11 ASP 12 GLY 13 ILE 14 ILE 15 LYS 16 ALA 17 ASP 18 LYS 19 VAL 20 PHE 21 ASN 22 LYS 23 VAL 24 LYS 25 ASP 26 LYS 27 ILE 28 SER 29 LEU 30 PRO 31 ASN 32 ARG 33 ILE 34 LEU 35 TYR 36 LEU 37 GLY 38 CYS 39 GLY 40 SER 41 SER 42 HIS 43 PHE 44 LEU 45 SER 46 LYS 47 LEU 48 LEU 49 ALA 50 MET 51 VAL 52 THR 53 ASN 54 MET 55 HIS 56 GLY 57 GLY 58 LEU 59 GLY 60 ILE 61 ALA 62 LEU 63 PRO 64 CYS 65 SER 66 GLU 67 PHE 68 LEU 69 TYR 70 SER 71 LYS 72 GLU 73 THR 74 TYR 75 PRO 76 ILE 77 GLY 78 GLU 79 VAL 80 GLU 81 LEU 82 ALA 83 VAL 84 GLY 85 ILE 86 SER 87 ARG 88 SER 89 GLY 90 GLU 91 THR 92 THR 93 GLU 94 ILE 95 LEU 96 LEU 97 ALA 98 LEU 99 GLU 100 LYS 101 ILE 102 ASN 103 VAL 104 LYS 105 LYS 106 LEU 107 GLY 108 ILE 109 THR 110 THR 111 ARG 112 GLU 113 SER 114 SER 115 LEU 116 THR 117 ARG 118 MET 119 CYS 120 ASP 121 TYR 122 SER 123 LEU 124 VAL 125 VAL 126 PRO 127 ALA 128 ILE 129 GLU 130 GLU 131 SER 132 VAL 133 VAL 134 MET 135 THR 136 HIS 137 SER 138 PHE 139 THR 140 SER 141 PHE 142 TYR 143 PHE 144 ALA 145 TYR 146 LEU 147 GLN 148 LEU 149 LEU 150 ARG 151 TYR 152 SER 153 TYR 154 GLY 155 LEU 156 PRO 157 PRO 158 LEU 159 ASN 160 ALA 161 GLY 162 GLU 163 ILE 164 SER 165 LYS 166 ALA 167 THR 168 GLU 169 LYS 170 SER 171 LEU 172 GLU 173 TYR 174 GLU 175 ARG 176 TYR 177 ILE 178 ARG 179 GLU 180 ILE 181 VAL 182 GLU 183 SER 184 PHE 185 ASP 186 PHE 187 GLN 188 ASN 189 ILE 190 ILE 191 PHE 192 LEU 193 GLY 194 SER 195 GLY 196 LEU 197 LEU 198 TYR 199 PRO 200 VAL 201 ALA 202 LEU 203 GLU 204 ALA 205 SER 206 LEU 207 LYS 208 MET 209 LYS 210 GLU 211 MET 212 SER 213 ILE 214 PHE 215 TRP 216 SER 217 GLU 218 ALA 219 TYR 220 PRO 221 THR 222 PHE 223 GLU 224 VAL 225 ARG 226 HIS 227 GLY 228 PHE 229 LYS 230 ALA 231 ILE 232 ALA 233 ASP 234 GLU 235 LYS 236 THR 237 LEU 238 VAL 239 VAL 240 LEU 241 MET 242 VAL 243 GLU 244 GLU 245 PRO 246 PHE 247 GLU 248 TRP 249 HIS 250 GLU 251 LYS 252 LEU 253 VAL 254 LYS 255 GLU 256 PHE 257 LYS 258 ASN 259 GLN 260 GLY 261 ALA 262 LYS 263 VAL 264 LEU 265 VAL 266 ILE 267 SER 268 ASN 269 SER 270 PRO 271 GLN 272 ASP 273 LEU 274 GLY 275 GLN 276 ASP 277 TYR 278 SER 279 ILE 280 GLU 281 LEU 282 PRO 283 ARG 284 LEU 285 SER 286 LYS 287 ASP 288 ALA 289 ASN 290 PRO 291 ILE 292 PRO 293 TYR 294 LEU 295 PRO 296 ILE 297 VAL 298 GLN 299 LEU 300 LEU 301 SER 302 TYR 303 TYR 304 LYS 305 ALA 306 VAL 307 SER 308 ARG 309 GLY 310 LEU 311 ASN 312 PRO 313 ASP 314 ASN 315 PRO 316 ARG 317 PHE 318 LEU 319 ASP 320 LYS 321 VAL 322 VAL 323 ARG 324 TRP 325

Unit 2

LYS 2 THR 3 LEU 4 ILE 5 GLU 6 ILE 7 LYS 8 GLN 9 THR 10 PRO 11 ASP 12 GLY 13 ILE 14 ILE 15 LYS 16 ALA 17 ASP 18 LYS 19 VAL 20 PHE 21 ASN 22 LYS 23 VAL 24 LYS 25 ASP 26 LYS 27 ILE 28 SER 29 LEU 30 PRO 31 ASN 32 ARG 33 ILE 34 LEU 35 TYR 36 LEU 37 GLY 38 CYS 39 GLY 40 SER 41 SER 42 HIS 43 PHE 44 LEU 45 SER 46 LYS 47 LEU 48 LEU 49 ALA 50 MET 51 VAL 52 THR 53 ASN 54 MET 55 HIS 56 GLY 57 GLY 58 LEU 59 GLY 60 ILE 61 ALA 62 LEU 63 PRO 64 CYS 65 SER 66 GLU 67 PHE 68 LEU 69 TYR 70 SER 71 LYS 72 GLU 73 THR 74 TYR 75 PRO 76 ILE 77 GLY 78 GLU 79 VAL 80 GLU 81 LEU 82 ALA 83 VAL 84 GLY 85 ILE 86 SER 87 ARG 88 SER 89 GLY 90 GLU 91 THR 92 THR 93 GLU 94 ILE 95 LEU 96 LEU 97 ALA 98 LEU 99 GLU 100 LYS 101 ILE 102 ASN 103 VAL 104 LYS 105 LYS 106 LEU 107 GLY 108 ILE 109 THR 110 THR 111 ARG 112 GLU 113 SER 114 SER 115 LEU 116 THR 117 ARG 118 MET 119 CYS 120 ASP 121 TYR 122 SER 123 LEU 124 VAL 125 VAL 126 PRO 127 ALA 128 ILE 129 GLU 130 GLU 131 SER 132 VAL 133 VAL 134 MET 135 THR 136 HIS 137 SER 138 PHE 139 THR 140 SER 141 PHE 142 TYR 143 PHE 144 ALA 145 TYR 146 LEU 147 GLN 148 LEU 149 LEU 150 ARG 151 TYR 152 SER 153 TYR 154 GLY 155 LEU 156 PRO 157 PRO 158 LEU 159 ASN 160 ALA 161 GLY 162 GLU 163 ILE 164 SER 165 LYS 166 ALA 167 THR 168 GLU 169 LYS 170 SER 171 LEU 172 GLU 173 TYR 174 GLU 175 ARG 176 TYR 177 ILE 178 ARG 179 GLU 180 ILE 181 VAL 182 GLU 183 SER 184 PHE 185 ASP 186 PHE 187 GLN 188 ASN 189 ILE 190 ILE 191 PHE 192 LEU 193 GLY 194 SER 195 GLY 196 LEU 197 LEU 198 TYR 199 PRO 200 VAL 201 ALA 202 LEU 203 GLU 204 ALA 205 SER 206 LEU 207 LYS 208 MET 209 LYS 210 GLU 211 MET 212 SER 213 ILE 214 PHE 215 TRP 216 SER 217 GLU 218 ALA 219 TYR 220 PRO 221 THR 222 PHE 223 GLU 224 VAL 225 ARG 226 HIS 227 GLY 228 PHE 229 LYS 230 ALA 231 ILE 232 ALA 233 ASP 234 GLU 235 LYS 236 THR 237 LEU 238 VAL 239 VAL 240 LEU 241 MET 242 VAL 243 GLU 244 GLU 245 PRO 246 PHE 247 GLU 248 TRP 249 HIS 250 GLU 251 LYS 252 LEU 253 VAL 254 LYS 255 GLU 256 PHE 257 LYS 258 ASN 259 GLN 260 GLY 261 ALA 262 LYS 263 VAL 264 LEU 265 VAL 266 ILE 267 SER 268 ASN 269 SER 270 PRO 271 GLN 272 ASP 273 LEU 274 GLY 275 GLN 276 ASP 277 TYR 278 SER 279 ILE 280 GLU 281 LEU 282 PRO 283 ARG 284 LEU 285 SER 286 LYS 287 ASP 288 ALA 289 ASN 290 PRO 291 ILE 292 PRO 293 TYR 294 LEU 295 PRO 296 ILE 297 VAL 298 GLN 299 LEU 300 LEU 301 SER 302 TYR 303 TYR 304 LYS 305 ALA 306 VAL 307 SER 308 ARG 309 GLY 310 LEU 311 ASN 312 PRO 313 ASP 314 ASN 315 PRO 316 ARG 317 PHE 318 LEU 319 ASP 320 LYS 321 VAL 322 VAL 323 ARG 324 TRP 325

Ligands

Unit 3	F1P 801 EDO 901 EDO 903
Unit 4	F1P 802 EDO 902