2D5F - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF RECOMBINANT SOYBEAN PROGLYCININ A3B4 SU COMPARISON WITH MATURE GLYCININ A3B4 SUBUNIT, RESPONSIBLE F ASSEMBLY
• Keywords: GLYCININ, SOYBEAN, GLOBULIN, 11S,SEED STORAGE PROTEIN, PLANT
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2D5F	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	GLYCININ A3B4 SUBUNIT	A	384	3010	8
2	Protein	GLYCININ A3B4 SUBUNIT	B	385	3019	8
3	Ligand	GLYCININ A3B4 SUBUNIT	A	2	0	5
4	Ligand	GLYCININ A3B4 SUBUNIT	B	2	0	5
5	Water			458	0	458
total				1231	6029	484

Proteins

Unit 1

ASN 7 GLU 8 CYS 9 GLN 10 LEU 11 ASN 12 ASN 13 LEU 14 ASN 15 ALA 16 LEU 17 GLU 18 PRO 19 ASP 20 HIS 21 ARG 22 VAL 23 GLU 24 SER 25 GLU 26 GLY 27 GLY 28 LEU 29 ILE 30 GLU 31 THR 32 TRP 33 ASN 34 SER 35 GLN 36 HIS 37 PRO 38 GLU 39 LEU 40 GLN 41 CYS 42 ALA 43 GLY 44 VAL 45 THR 46 VAL 47 SER 48 LYS 49 ARG 50 THR 51 LEU 52 ASN 53 ARG 54 ASN 55 GLY 56 LEU 57 HIS 58 LEU 59 PRO 60 SER 61 TYR 62 SER 63 PRO 64 TYR 65 PRO 66 GLN 67 MET 68 ILE 69 ILE 70 VAL 71 VAL 72 GLN 73 GLY 74 LYS 75 GLY 76 ALA 77 ILE 78 GLY 79 PHE 80 ALA 81 PHE 82 PRO 83 GLY 84 CYS 85 PRO 86 GLU 87 THR 88 PHE 89 GLU 90 LYS 91 PRO 92 GLN 106 LEU 107 GLN 108 ASP 109 SER 110 HIS 111 GLN 112 LYS 113 ILE 114 ARG 115 HIS 116 PHE 117 ASN 118 GLU 119 GLY 120 ASP 121 VAL 122 LEU 123 VAL 124 ILE 125 PRO 126 PRO 127 GLY 128 VAL 129 PRO 130 TYR 131 TRP 132 THR 133 TYR 134 ASN 135 THR 136 GLY 137 ASP 138 GLU 139 PRO 140 VAL 141 VAL 142 ALA 143 ILE 144 SER 145 LEU 146 LEU 147 ASP 148 THR 149 SER 150 ASN 151 PHE 152 ASN 153 ASN 154 GLN 155 LEU 156 ASP 157 GLN 158 ASN 159 PRO 160 ARG 161 VAL 162 PHE 163 TYR 164 LEU 165 ALA 166 GLY 167 ASN 168 PRO 169 ASP 170 ILE 171 GLU 172 HIS 173 PRO 174 GLU 175 THR 176 MET 177 GLN 178 GLU 200 GLY 201 GLY 202 SER 203 VAL 204 LEU 205 SER 206 GLY 207 PHE 208 SER 209 LYS 210 HIS 211 PHE 212 LEU 213 ALA 214 GLN 215 SER 216 PHE 217 ASN 218 THR 219 ASN 220 GLU 221 ASP 222 THR 223 ALA 224 GLU 225 LYS 226 LEU 227 ARG 228 SER 229 PRO 230 ASP 231 ASP 232 GLU 233 ARG 234 LYS 235 GLN 236 ILE 237 VAL 238 THR 239 VAL 240 GLU 241 GLY 242 GLY 243 LEU 244 SER 245 VAL 246 ILE 247 SER 248 PRO 249 LYS 250 TRP 251 GLY 321 VAL 322 GLU 323 GLU 324 ASN 325 ILE 326 CYS 327 THR 328 MET 329 LYS 330 LEU 331 HIS 332 GLU 333 ASN 334 ILE 335 ALA 336 ARG 337 PRO 338 SER 339 ARG 340 ALA 341 ASP 342 PHE 343 TYR 344 ASN 345 PRO 346 LYS 347 ALA 348 GLY 349 ARG 350 ILE 351 SER 352 THR 353 LEU 354 ASN 355 SER 356 LEU 357 THR 358 LEU 359 PRO 360 ALA 361 LEU 362 ARG 363 GLN 364 PHE 365 GLY 366 LEU 367 SER 368 ALA 369 GLN 370 TYR 371 VAL 372 VAL 373 LEU 374 TYR 375 ARG 376 ASN 377 GLY 378 ILE 379 TYR 380 SER 381 PRO 382 HIS 383 TRP 384 ASN 385 LEU 386 ASN 387 ALA 388 ASN 389 SER 390 VAL 391 ILE 392 TYR 393 VAL 394 THR 395 ARG 396 GLY 397 LYS 398 GLY 399 ARG 400 VAL 401 ARG 402 VAL 403 VAL 404 ASN 405 CSD 406 GLN 407 GLY 408 ASN 409 ALA 410 VAL 411 PHE 412 ASP 413 GLY 414 GLU 415 LEU 416 ARG 417 ARG 418 GLY 419 GLN 420 LEU 421 LEU 422 VAL 423 VAL 424 PRO 425 GLN 426 ASN 427 PHE 428 VAL 429 VAL 430 ALA 431 GLU 432 GLN 433 GLY 434 GLY 435 GLU 436 GLN 437 GLY 438 LEU 439 GLU 440 TYR 441 VAL 442 VAL 443 PHE 444 LYS 445 THR 446 HIS 447 HIS 448 ASN 449 ALA 450 VAL 451 SER 452 SER 453 TYR 454 ILE 455 LYS 456 ASP 457 VAL 458 PHE 459 ARG 460 ALA 461 ILE 462 PRO 463 SER 464 GLU 465 VAL 466 LEU 467 SER 468 ASN 469 SER 470 TYR 471 ASN 472 LEU 473 GLY 474 GLN 475 SER 476 GLN 477 VAL 478 ARG 479 GLN 480 LEU 481 LYS 482 TYR 483 GLN 484 GLY 485 ASN 486 SER 487 GLY 488 PRO 489 LEU 490 VAL 491 ASN 492 PRO 493

Unit 2

ASN 7 GLU 8 CYS 9 GLN 10 LEU 11 ASN 12 ASN 13 LEU 14 ASN 15 ALA 16 LEU 17 GLU 18 PRO 19 ASP 20 HIS 21 ARG 22 VAL 23 GLU 24 SER 25 GLU 26 GLY 27 GLY 28 LEU 29 ILE 30 GLU 31 THR 32 TRP 33 ASN 34 SER 35 GLN 36 HIS 37 PRO 38 GLU 39 LEU 40 GLN 41 CYS 42 ALA 43 GLY 44 VAL 45 THR 46 VAL 47 SER 48 LYS 49 ARG 50 THR 51 LEU 52 ASN 53 ARG 54 ASN 55 GLY 56 LEU 57 HIS 58 LEU 59 PRO 60 SER 61 TYR 62 SER 63 PRO 64 TYR 65 PRO 66 GLN 67 MET 68 ILE 69 ILE 70 VAL 71 VAL 72 GLN 73 GLY 74 LYS 75 GLY 76 ALA 77 ILE 78 GLY 79 PHE 80 ALA 81 PHE 82 PRO 83 GLY 84 CYS 85 PRO 86 GLU 87 THR 88 PHE 89 GLU 90 LYS 91 PRO 92 GLN 93 GLN 106 LEU 107 GLN 108 ASP 109 SER 110 HIS 111 GLN 112 LYS 113 ILE 114 ARG 115 HIS 116 PHE 117 ASN 118 GLU 119 GLY 120 ASP 121 VAL 122 LEU 123 VAL 124 ILE 125 PRO 126 PRO 127 GLY 128 VAL 129 PRO 130 TYR 131 TRP 132 THR 133 TYR 134 ASN 135 THR 136 GLY 137 ASP 138 GLU 139 PRO 140 VAL 141 VAL 142 ALA 143 ILE 144 SER 145 LEU 146 LEU 147 ASP 148 THR 149 SER 150 ASN 151 PHE 152 ASN 153 ASN 154 GLN 155 LEU 156 ASP 157 GLN 158 ASN 159 PRO 160 ARG 161 VAL 162 PHE 163 TYR 164 LEU 165 ALA 166 GLY 167 ASN 168 PRO 169 ASP 170 ILE 171 GLU 172 HIS 173 PRO 174 GLU 175 THR 176 MET 177 GLN 178 GLU 200 GLY 201 GLY 202 SER 203 VAL 204 LEU 205 SER 206 GLY 207 PHE 208 SER 209 LYS 210 HIS 211 PHE 212 LEU 213 ALA 214 GLN 215 SER 216 PHE 217 ASN 218 THR 219 ASN 220 GLU 221 ASP 222 THR 223 ALA 224 GLU 225 LYS 226 LEU 227 ARG 228 SER 229 PRO 230 ASP 231 ASP 232 GLU 233 ARG 234 LYS 235 GLN 236 ILE 237 VAL 238 THR 239 VAL 240 GLU 241 GLY 242 GLY 243 LEU 244 SER 245 VAL 246 ILE 247 SER 248 PRO 249 LYS 250 TRP 251 GLY 321 VAL 322 GLU 323 GLU 324 ASN 325 ILE 326 CYS 327 THR 328 MET 329 LYS 330 LEU 331 HIS 332 GLU 333 ASN 334 ILE 335 ALA 336 ARG 337 PRO 338 SER 339 ARG 340 ALA 341 ASP 342 PHE 343 TYR 344 ASN 345 PRO 346 LYS 347 ALA 348 GLY 349 ARG 350 ILE 351 SER 352 THR 353 LEU 354 ASN 355 SER 356 LEU 357 THR 358 LEU 359 PRO 360 ALA 361 LEU 362 ARG 363 GLN 364 PHE 365 GLY 366 LEU 367 SER 368 ALA 369 GLN 370 TYR 371 VAL 372 VAL 373 LEU 374 TYR 375 ARG 376 ASN 377 GLY 378 ILE 379 TYR 380 SER 381 PRO 382 HIS 383 TRP 384 ASN 385 LEU 386 ASN 387 ALA 388 ASN 389 SER 390 VAL 391 ILE 392 TYR 393 VAL 394 THR 395 ARG 396 GLY 397 LYS 398 GLY 399 ARG 400 VAL 401 ARG 402 VAL 403 VAL 404 ASN 405 CSD 406 GLN 407 GLY 408 ASN 409 ALA 410 VAL 411 PHE 412 ASP 413 GLY 414 GLU 415 LEU 416 ARG 417 ARG 418 GLY 419 GLN 420 LEU 421 LEU 422 VAL 423 VAL 424 PRO 425 GLN 426 ASN 427 PHE 428 VAL 429 VAL 430 ALA 431 GLU 432 GLN 433 GLY 434 GLY 435 GLU 436 GLN 437 GLY 438 LEU 439 GLU 440 TYR 441 VAL 442 VAL 443 PHE 444 LYS 445 THR 446 HIS 447 HIS 448 ASN 449 ALA 450 VAL 451 SER 452 SER 453 TYR 454 ILE 455 LYS 456 ASP 457 VAL 458 PHE 459 ARG 460 ALA 461 ILE 462 PRO 463 SER 464 GLU 465 VAL 466 LEU 467 SER 468 ASN 469 SER 470 TYR 471 ASN 472 LEU 473 GLY 474 GLN 475 SER 476 GLN 477 VAL 478 ARG 479 GLN 480 LEU 481 LYS 482 TYR 483 GLN 484 GLY 485 ASN 486 SER 487 GLY 488 PRO 489 LEU 490 VAL 491 ASN 492 PRO 493

Ligands

Unit 3	CO3 501 MG 602
Unit 4	CO3 502 MG 601