2D39 - Sequence, Chains, Asymmetric and Biological Units

• Title: TRIVALENT RECOGNITION UNIT OF INNATE IMMUNITY SYSTEM; CRYSTAL STRUCTURE OF HUMAN M-FICOLIN FIBRINOGEN-LIKE DOMAIN
• Keywords: INNATE IMMUNITY SYSTEM, FICOLIN, M-FICOLIN, LECTIN PATHWAY, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2D39	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	FICOLIN-1	A	209	1656	0
2	Protein	FICOLIN-1	B	200	1591	0
3	Protein	FICOLIN-1	C	212	1680	0
4	Ligand	FICOLIN-1	A	1	0	1
5	Ligand	FICOLIN-1	C	1	0	1
6	Water			283	0	283
total				906	4927	285

Proteins

Unit 1	GLU 113 PHE 114 PRO 115 ARG 116 ASN 117 CYS 118 LYS 119 ASP 120 LEU 121 LEU 122 ASP 123 ARG 124 GLY 125 TYR 126 PHE 127 LEU 128 SER 129 GLY 130 TRP 131 HIS 132 THR 133 ILE 134 TYR 135 LEU 136 PRO 137 ASP 138 CYS 139 ARG 140 PRO 141 LEU 142 THR 143 VAL 144 LEU 145 CYS 146 ASP 147 MET 148 ASP 149 THR 150 ASP 151 GLY 152 GLY 153 GLY 154 TRP 155 THR 156 VAL 157 PHE 158 GLN 159 ARG 160 ARG 161 MET 162 ASP 163 GLY 164 SER 165 VAL 166 ASP 167 PHE 168 TYR 169 ARG 170 ASP 171 TRP 172 ALA 173 ALA 174 TYR 175 LYS 176 GLN 177 GLY 178 PHE 179 GLY 180 SER 181 GLN 182 LEU 183 GLY 184 GLU 185 PHE 186 TRP 187 LEU 188 GLY 189 ASN 190 ASP 191 ASN 192 ILE 193 HIS 194 ALA 195 LEU 196 THR 197 ALA 198 GLN 199 GLY 200 SER 201 SER 202 GLU 203 LEU 204 ARG 205 VAL 206 ASP 207 LEU 208 VAL 209 ASP 210 PHE 211 GLU 212 GLY 213 ASN 214 HIS 215 GLN 216 PHE 217 ALA 218 LYS 219 TYR 220 LYS 221 SER 222 PHE 223 LYS 224 VAL 225 ALA 226 ASP 227 GLU 228 ALA 229 GLU 230 LYS 231 TYR 232 LYS 233 LEU 234 VAL 235 LEU 236 GLY 237 ALA 238 PHE 239 VAL 240 GLY 241 GLY 242 SER 243 ALA 244 GLY 245 ASN 246 SER 247 LEU 248 THR 249 GLY 250 HIS 251 ASN 252 ASN 253 ASN 254 PHE 255 PHE 256 SER 257 THR 258 LYS 259 ASP 260 GLN 261 ASP 262 ASN 263 ASP 264 VAL 265 SER 266 SER 267 SER 268 ASN 269 CYS 270 ALA 271 GLU 272 LYS 273 PHE 274 GLN 275 GLY 276 ALA 277 TRP 278 TRP 279 TYR 280 ALA 281 ASP 282 CYS 283 HIS 284 ALA 285 SER 286 ASN 287 LEU 288 ASN 289 GLY 290 LEU 291 TYR 292 LEU 293 MET 294 GLY 295 ALA 301 ASN 302 GLY 303 ILE 304 ASN 305 TRP 306 SER 307 ALA 308 ALA 309 LYS 310 GLY 311 TYR 312 LYS 313 TYR 314 SER 315 TYR 316 LYS 317 VAL 318 SER 319 GLU 320 MET 321 LYS 322 VAL 323 ARG 324 PRO 325 ALA 326
Unit 2	PHE 114 PRO 115 ARG 116 ASN 117 CYS 118 LYS 119 ASP 120 LEU 121 LEU 122 ASP 123 ARG 124 GLY 125 TYR 126 PHE 127 LEU 128 SER 129 GLY 130 TRP 131 HIS 132 THR 133 ILE 134 TYR 135 LEU 136 PRO 137 ASP 138 CYS 139 ARG 140 PRO 141 LEU 142 THR 143 VAL 144 LEU 145 CYS 146 ASP 147 MET 148 ASP 149 THR 150 ASP 151 GLY 152 GLY 153 GLY 154 TRP 155 THR 156 VAL 157 PHE 158 GLN 159 ARG 160 ARG 161 MET 162 ASP 163 GLY 164 SER 165 VAL 166 ASP 167 PHE 168 TYR 169 ARG 170 ASP 171 TRP 172 ALA 173 ALA 174 TYR 175 LYS 176 GLN 177 GLY 178 PHE 179 GLY 180 SER 181 GLN 182 LEU 183 GLY 184 GLU 185 PHE 186 TRP 187 LEU 188 GLY 189 ASN 190 ASP 191 ASN 192 ILE 193 HIS 194 ALA 195 LEU 196 THR 197 ALA 198 GLN 199 GLY 200 SER 201 SER 202 GLU 203 LEU 204 ARG 205 VAL 206 ASP 207 LEU 208 VAL 209 ASP 210 PHE 211 GLU 212 GLY 213 ASN 214 HIS 215 GLN 216 PHE 217 ALA 218 LYS 219 TYR 220 LYS 221 SER 222 PHE 223 LYS 224 VAL 225 ALA 226 ASP 227 GLU 228 ALA 229 GLU 230 LYS 231 TYR 232 LYS 233 LEU 234 VAL 235 LEU 236 GLY 237 ALA 238 PHE 239 VAL 240 GLY 241 GLY 242 SER 243 ALA 244 GLY 245 ASN 246 SER 247 LEU 248 THR 249 GLY 250 HIS 251 ASN 252 ASN 253 ASN 254 PHE 255 PHE 256 SER 257 THR 258 LYS 259 ASP 260 GLN 261 ASP 262 ASN 263 ASP 264 VAL 265 SER 266 SER 267 SER 268 ASN 269 CYS 270 ALA 271 GLU 272 LYS 273 PHE 274 GLN 275 GLY 276 ALA 277 TRP 278 TRP 279 TYR 280 ALA 281 ASP 282 CYS 283 HIS 284 ALA 285 SER 286 ASN 287 LEU 288 ASN 289 GLY 290 LEU 291 TYR 292 LEU 293 ALA 301 ASN 302 GLY 303 ILE 304 ASN 305 TRP 306 SER 307 TYR 314 SER 315 TYR 316 LYS 317 VAL 318 SER 319 GLU 320 MET 321 LYS 322 VAL 323 ARG 324 PRO 325 ALA 326
Unit 3	PRO 115 ARG 116 ASN 117 CYS 118 LYS 119 ASP 120 LEU 121 LEU 122 ASP 123 ARG 124 GLY 125 TYR 126 PHE 127 LEU 128 SER 129 GLY 130 TRP 131 HIS 132 THR 133 ILE 134 TYR 135 LEU 136 PRO 137 ASP 138 CYS 139 ARG 140 PRO 141 LEU 142 THR 143 VAL 144 LEU 145 CYS 146 ASP 147 MET 148 ASP 149 THR 150 ASP 151 GLY 152 GLY 153 GLY 154 TRP 155 THR 156 VAL 157 PHE 158 GLN 159 ARG 160 ARG 161 MET 162 ASP 163 GLY 164 SER 165 VAL 166 ASP 167 PHE 168 TYR 169 ARG 170 ASP 171 TRP 172 ALA 173 ALA 174 TYR 175 LYS 176 GLN 177 GLY 178 PHE 179 GLY 180 SER 181 GLN 182 LEU 183 GLY 184 GLU 185 PHE 186 TRP 187 LEU 188 GLY 189 ASN 190 ASP 191 ASN 192 ILE 193 HIS 194 ALA 195 LEU 196 THR 197 ALA 198 GLN 199 GLY 200 SER 201 SER 202 GLU 203 LEU 204 ARG 205 VAL 206 ASP 207 LEU 208 VAL 209 ASP 210 PHE 211 GLU 212 GLY 213 ASN 214 HIS 215 GLN 216 PHE 217 ALA 218 LYS 219 TYR 220 LYS 221 SER 222 PHE 223 LYS 224 VAL 225 ALA 226 ASP 227 GLU 228 ALA 229 GLU 230 LYS 231 TYR 232 LYS 233 LEU 234 VAL 235 LEU 236 GLY 237 ALA 238 PHE 239 VAL 240 GLY 241 GLY 242 SER 243 ALA 244 GLY 245 ASN 246 SER 247 LEU 248 THR 249 GLY 250 HIS 251 ASN 252 ASN 253 ASN 254 PHE 255 PHE 256 SER 257 THR 258 LYS 259 ASP 260 GLN 261 ASP 262 ASN 263 ASP 264 VAL 265 SER 266 SER 267 SER 268 ASN 269 CYS 270 ALA 271 GLU 272 LYS 273 PHE 274 GLN 275 GLY 276 ALA 277 TRP 278 TRP 279 TYR 280 ALA 281 ASP 282 CYS 283 HIS 284 ALA 285 SER 286 ASN 287 LEU 288 ASN 289 GLY 290 LEU 291 TYR 292 LEU 293 MET 294 GLY 295 PRO 296 HIS 297 GLU 298 SER 299 TYR 300 ALA 301 ASN 302 GLY 303 ILE 304 ASN 305 TRP 306 SER 307 ALA 308 ALA 309 LYS 310 GLY 311 TYR 312 LYS 313 TYR 314 SER 315 TYR 316 LYS 317 VAL 318 SER 319 GLU 320 MET 321 LYS 322 VAL 323 ARG 324 PRO 325 ALA 326

Ligands

Unit 4	CA 1401
Unit 5	CA 2401