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| Title | CRYSTAL STRUCTURE OF METHANOSARCINA BARKERI SERYL-TRNA SYNTH COMPLEXED WITH AN ANALOG OF SERYLADENYLATE | |
| Keywords | LIGASE, ZINC ION, SERYLADENYLATE, TRNA SYNTHETASE | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 2CJ9 | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | SERYL-TRNA SYNTHETASE | A | 477 | 3892 | 0 |
| 2 | Protein | SERYL-TRNA SYNTHETASE | B | 493 | 4007 | 0 |
| 3 | Ligand | SERYL-TRNA SYNTHETASE | A | 3 | 0 | 31 |
| 4 | Ligand | SERYL-TRNA SYNTHETASE | B | 3 | 0 | 31 |
| 5 | Water | 330 | 0 | 330 | ||
| total | 1306 | 7899 | 392 |
| Unit 1 | SER-2 HIS-1 MET1 LYS2 LEU3 GLN4 PHE5 ASN6 LEU7 LYS8 ALA9 TYR10 PHE11 ALA20 LYS21 ASP22 ALA23 ILE24 ALA25 ALA26 LEU27 PHE28 GLU29 GLU30 ALA31 ASN32 SER33 THR34 LEU35 LEU36 THR37 ARG38 GLY39 ALA40 PRO41 GLU42 GLY43 GLN44 GLY45 ALA46 LYS47 VAL48 THR49 GLU50 TRP51 ASP56 ARG57 ILE58 GLU59 LEU60 THR61 LEU62 GLN63 SER64 GLY65 ARG66 TYR67 VAL68 ARG69 VAL70 HIS71 ASP72 ALA73 ILE74 PHE75 ARG76 LEU77 ARG78 LYS79 GLN80 LEU81 ALA82 GLU83 GLY95 ILE96 GLU97 VAL98 GLU99 SER100 PHE101 ILE102 ILE103 LYS104 VAL105 PRO106 ALA107 ASP108 HIS109 GLU110 LEU111 ARG112 MET113 LEU114 LYS115 VAL116 PRO117 TYR118 ILE119 LYS120 SER121 MET122 GLU123 ASN124 ILE125 GLU126 GLY127 GLY128 ILE129 GLN130 LEU131 GLU132 LEU133 GLU134 VAL135 GLY136 GLU137 ALA138 GLU139 MET140 LYS141 ASN142 ARG143 VAL144 PRO145 ASP146 ARG147 ILE148 LEU149 THR150 LEU151 LEU152 GLU153 GLU154 LYS155 ILE156 GLU157 ALA158 ALA159 LYS164 ALA165 GLU166 HIS167 TRP168 ASN169 LEU170 LEU171 TRP172 GLN173 ARG174 GLU175 PRO176 MET177 GLU178 HIS179 PRO180 PHE181 LYS182 GLU183 ASP184 PRO185 THR186 GLN187 ALA188 MET189 MET190 LYS191 GLU192 GLY193 TRP194 LEU195 LYS196 ARG197 GLY198 SER199 SER200 ARG201 GLY202 GLN203 TRP204 ILE205 HIS206 GLY207 PRO208 GLN209 SER210 ALA211 ARG212 ILE213 PHE214 ARG215 THR216 PHE217 GLU218 LYS219 ILE220 VAL221 LEU222 GLU223 GLU224 LEU225 LEU226 GLU227 PRO228 LEU229 GLY230 TYR231 ARG232 GLU233 MET234 ILE235 PHE236 PRO237 LYS238 LEU239 VAL240 THR241 TRP242 GLU243 VAL244 TRP245 MET246 LYS247 SER248 GLY249 HIS250 ALA251 LYS252 GLY253 VAL254 TYR255 PRO256 GLU257 ILE258 TYR259 TYR260 VAL261 CYS262 PRO263 PRO264 GLN265 THR266 ARG267 ASP268 PRO269 ASP270 TYR271 TRP272 GLU273 GLU274 VAL275 ALA276 ASP277 TYR278 TYR279 LYS280 VAL281 THR282 HIS283 GLU284 VAL285 PRO286 THR287 LYS288 LEU289 ILE290 LYS291 GLU292 LYS293 ILE294 ALA295 GLU296 PRO297 ILE298 GLY299 GLY300 MET301 CYS302 TYR303 ALA304 GLN305 CYS306 PRO307 PRO308 PHE309 TRP310 MET311 TYR312 VAL313 ALA314 GLY315 GLU316 THR317 LEU318 PRO319 ASN320 GLU321 GLU322 ILE323 PRO324 VAL325 LYS326 VAL327 PHE328 ASP329 ARG330 SER331 GLY332 THR333 SER334 HIS335 ARG336 TYR337 GLU338 SER339 GLY340 GLY341 ILE342 HIS343 GLY344 ILE345 GLU346 ARG347 VAL348 ASP349 GLU350 PHE351 HIS352 ARG353 ILE354 GLU355 ILE356 VAL357 TRP358 ILE359 GLY360 THR361 LYS362 GLU363 GLU364 VAL365 LEU366 LYS367 CYS368 ALA369 GLU370 GLU371 LEU372 HIS373 ASP374 ARG375 TYR376 MET377 HIS378 ILE379 PHE380 ASN381 ASP382 ILE383 LEU384 ASP385 ILE386 GLU387 TRP388 ARG389 LYS390 ALA391 ARG392 VAL393 THR394 PRO395 TRP396 PHE397 MET398 ALA399 GLN400 GLU401 GLY402 LEU403 LEU404 GLY405 LEU406 ALA407 GLU408 GLU409 ASN410 THR411 VAL412 GLY413 THR414 THR415 ASP416 TYR417 GLU418 ALA419 CYS420 LEU421 PRO422 TYR423 ARG424 GLY425 PRO426 ASP427 GLY428 GLU429 TRP430 LEU431 GLU432 PHE433 GLN434 ASN435 VAL436 SER437 ILE438 ASN439 GLY440 ASP441 LYS442 TYR443 PRO444 LYS445 GLY446 PHE447 ASN448 VAL449 LYS450 LEU451 GLN452 SER453 GLY454 ASP455 GLU456 LEU457 TRP458 SER459 GLY460 CYS461 SER462 GLY463 VAL464 GLY465 LEU466 GLU467 ARG468 TRP469 ALA470 ALA471 VAL472 PHE473 LEU474 ALA475 GLN476 LYS477 GLY478 LEU479 ASP480 PRO481 ALA482 ASN483 TRP484 PRO485 GLU486 GLU487 PHE488 ARG489 ASN490 ARG491 VAL492 GLY493 GLU494 MET495 PRO496 LYS497 GLY498 ILE499 ARG500 PHE501 LEU502 |
| Unit 2 | GLY-3 SER-2 HIS-1 MET1 LYS2 LEU3 GLN4 PHE5 ASN6 LEU7 LYS8 ALA9 TYR10 PHE11 LYS12 THR13 SER14 ALA15 ASP16 PRO17 THR18 PRO19 ALA20 LYS21 ASP22 ALA23 ILE24 ALA25 ALA26 LEU27 PHE28 GLU29 GLU30 ALA31 ASN32 SER33 THR34 LEU35 LEU36 THR37 ARG38 GLY39 ALA40 PRO41 GLU42 GLY43 GLN44 GLY45 ALA46 LYS47 VAL48 THR49 GLU50 TRP51 LYS52 LEU53 GLY54 GLU55 ASP56 ARG57 ILE58 GLU59 LEU60 THR61 LEU62 GLN63 SER64 GLY65 ARG66 TYR67 VAL68 ARG69 VAL70 HIS71 ASP72 ALA73 ILE74 PHE75 ARG76 LEU77 ARG78 LYS79 GLN80 LEU81 ALA82 GLU83 ALA84 LEU85 GLY95 ILE96 GLU97 VAL98 GLU99 SER100 PHE101 ILE102 ILE103 LYS104 VAL105 PRO106 ALA107 ASP108 HIS109 GLU110 LEU111 ARG112 MET113 LEU114 LYS115 VAL116 PRO117 TYR118 ILE119 LYS120 SER121 MET122 GLU123 ASN124 ILE125 GLU126 GLY127 GLY128 ILE129 GLN130 LEU131 GLU132 LEU133 GLU134 VAL135 GLY136 GLU137 ALA138 GLU139 MET140 LYS141 ASN142 ARG143 VAL144 PRO145 ASP146 ARG147 ILE148 LEU149 THR150 LEU151 LEU152 GLU153 GLU154 LYS155 ILE156 GLU157 ALA158 ALA159 GLN160 TYR161 ALA165 GLU166 HIS167 TRP168 ASN169 LEU170 LEU171 TRP172 GLN173 ARG174 GLU175 PRO176 MET177 GLU178 HIS179 PRO180 PHE181 LYS182 GLU183 ASP184 PRO185 THR186 GLN187 ALA188 MET189 MET190 LYS191 GLU192 GLY193 TRP194 LEU195 LYS196 ARG197 GLY198 SER199 SER200 ARG201 GLY202 GLN203 TRP204 ILE205 HIS206 GLY207 PRO208 GLN209 SER210 ALA211 ARG212 ILE213 PHE214 ARG215 THR216 PHE217 GLU218 LYS219 ILE220 VAL221 LEU222 GLU223 GLU224 LEU225 LEU226 GLU227 PRO228 LEU229 GLY230 TYR231 ARG232 GLU233 MET234 ILE235 PHE236 PRO237 LYS238 LEU239 VAL240 THR241 TRP242 GLU243 VAL244 TRP245 MET246 LYS247 SER248 GLY249 HIS250 ALA251 LYS252 GLY253 VAL254 TYR255 PRO256 GLU257 ILE258 TYR259 TYR260 VAL261 CYS262 PRO263 PRO264 GLN265 THR266 ARG267 ASP268 PRO269 ASP270 TYR271 TRP272 GLU273 GLU274 VAL275 ALA276 ASP277 TYR278 TYR279 LYS280 VAL281 THR282 HIS283 GLU284 VAL285 PRO286 THR287 LYS288 LEU289 ILE290 LYS291 GLU292 LYS293 ILE294 ALA295 GLU296 PRO297 ILE298 GLY299 GLY300 MET301 CYS302 TYR303 ALA304 GLN305 CYS306 PRO307 PRO308 PHE309 TRP310 MET311 TYR312 VAL313 ALA314 GLY315 GLU316 THR317 LEU318 PRO319 ASN320 GLU321 GLU322 ILE323 PRO324 VAL325 LYS326 VAL327 PHE328 ASP329 ARG330 SER331 GLY332 THR333 SER334 HIS335 ARG336 TYR337 GLU338 SER339 GLY340 GLY341 ILE342 HIS343 GLY344 ILE345 GLU346 ARG347 VAL348 ASP349 GLU350 PHE351 HIS352 ARG353 ILE354 GLU355 ILE356 VAL357 TRP358 ILE359 GLY360 THR361 LYS362 GLU363 GLU364 VAL365 LEU366 LYS367 CYS368 ALA369 GLU370 GLU371 LEU372 HIS373 ASP374 ARG375 TYR376 MET377 HIS378 ILE379 PHE380 ASN381 ASP382 ILE383 LEU384 ASP385 ILE386 GLU387 TRP388 ARG389 LYS390 ALA391 ARG392 VAL393 THR394 PRO395 TRP396 PHE397 MET398 ALA399 GLN400 GLU401 GLY402 LEU403 LEU404 GLY405 LEU406 ALA407 GLU408 GLU409 ASN410 THR411 VAL412 GLY413 THR414 THR415 ASP416 TYR417 GLU418 ALA419 CYS420 LEU421 PRO422 TYR423 ARG424 GLY425 PRO426 ASP427 GLY428 GLU429 TRP430 LEU431 GLU432 PHE433 GLN434 ASN435 VAL436 SER437 ILE438 ASN439 GLY440 ASP441 LYS442 TYR443 PRO444 LYS445 GLY446 PHE447 ASN448 VAL449 LYS450 LEU451 GLN452 SER453 GLY454 ASP455 GLU456 LEU457 TRP458 SER459 GLY460 CYS461 SER462 GLY463 VAL464 GLY465 LEU466 GLU467 ARG468 TRP469 ALA470 ALA471 VAL472 PHE473 LEU474 ALA475 GLN476 LYS477 GLY478 LEU479 ASP480 PRO481 ALA482 ASN483 TRP484 PRO485 GLU486 GLU487 PHE488 ARG489 ASN490 ARG491 VAL492 GLY493 GLU494 MET495 PRO496 LYS497 GLY498 ILE499 ARG500 PHE501 LEU502 |
| Unit 3 | ZN1503 CL1504 SSA1505 |
| Unit 4 | ZN1503 CL1504 SSA1505 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |