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Sequence, Chains, Asymmetric and Biological Units

Title REFINEMENT OF RNASE P P4 STEMLOOP STRUCTURE USING RESIDUAL DIPOLAR COUPLINGS - COBALT(III) HEXAMMINE COMPLEX STRUCTURE
Keywords COBALT (III) HEXAMMINE COMPLEX, METAL BINDING SITE, METAL COMPLEX, P4 STEM, RIBONUCLEASE P, RIBONUCLEIC ACID, RIBOZYME, TRANSFER RNA PROCESSING, NUCLEIC ACID
Experiment NMR
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2CD5     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 27 863 0
2  Ligand   5'-R(*GP*GP*AP*AP*GP*UP*CP*CP*GP*GP*UP*CP*UP  *UP*CP*GP*GP*AP*CP*CP*GP*GP*CP*UP*UP*CP*C)-3'  A 1 0 21
total       28 863 21

Nucleic acids
Unit 1 G1 G2 A3 A4 G5 U6 C7 C8 G9 G10 U11 C12 U13 U14 C15 G16 G17 A18 C19 C20 G21 G22 C23 U24 U25 C26 C27

Ligands
Unit 2 NCO1028

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany