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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PEPTIDOGLYCAN RECOGNITION PROTEIN-LE IN COMPLEX WITH TRACHEAL CYTOTOXIN (MONOMERIC DIAMINOPIMELIC ACID-TYPE PEPTIDOGLYCAN)
Keywords PGRP, TRACHEAL CYTOTOXIN, INNATE IMMUNITY, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2CB3     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PEPTIDOGLYCAN-RECOGNITION PROTEIN-LE  A 171 1365 0
2  Protein   PEPTIDOGLYCAN-RECOGNITION PROTEIN-LE  B 170 1357 0
3  Protein   PEPTIDOGLYCAN-RECOGNITION PROTEIN-LE  C 174 1388 0
4  Protein   PEPTIDOGLYCAN-RECOGNITION PROTEIN-LE  D 171 1365 0
5  Ligand   PEPTIDOGLYCAN-RECOGNITION PROTEIN-LE  A 2 0 70
6  Ligand   PEPTIDOGLYCAN-RECOGNITION PROTEIN-LE  B 1 0 64
7  Ligand   PEPTIDOGLYCAN-RECOGNITION PROTEIN-LE  C 1 0 64
8  Ligand   PEPTIDOGLYCAN-RECOGNITION PROTEIN-LE  D 1 0 64
9 Water     205 0 205
total       896 5475 467
Proteins
Unit 1 LEU174 SER175 ALA176 ILE177 ILE178 PRO179 ARG180 SER181 SER182 TRP183 LEU184 ALA185 GLN186 LYS187 PRO188 MET189 ASP190 GLU191 PRO192 LEU193 PRO194 LEU195 GLN196 LEU197 PRO198 VAL199 LYS200 TYR201 VAL202 VAL203 ILE204 LEU205 HIS206 THR207 ALA208 THR209 GLU210 SER211 SER212 GLU213 LYS214 ARG215 ALA216 ILE217 ASN218 VAL219 ARG220 LEU221 ILE222 ARG223 ASP224 MET225 GLN226 SER227 PHE228 HIS229 ILE230 GLU231 SER232 ARG233 GLY234 TRP235 ASN236 ASP237 ILE238 ALA239 TYR240 ASN241 PHE242 LEU243 VAL244 GLY245 CYS246 ASP247 GLY248 ASN249 ILE250 TYR251 GLU252 GLY253 ARG254 GLY255 TRP256 LYS257 THR258 VAL259 GLY260 ALA261 HIS262 THR263 LEU264 GLY265 TYR266 ASN267 ARG268 ILE269 SER270 LEU271 GLY272 ILE273 SER274 PHE275 ILE276 GLY277 CYS278 PHE279 MET280 LYS281 GLU282 LEU283 PRO284 THR285 ALA286 ASP287 ALA288 LEU289 ASN290 MET291 CYS292 ARG293 ASN294 LEU295 LEU296 ALA297 ARG298 GLY299 VAL300 GLU301 ASP302 GLY303 HIS304 ILE305 SER306 THR307 ASP308 TYR309 ARG310 LEU311 ILE312 CYS313 HIS314 CYS315 GLN316 CYS317 ASN318 SER319 THR320 GLU321 SER322 PRO323 GLY324 ARG325 ARG326 LEU327 TYR328 GLU329 GLU330 ILE331 GLN332 THR333 TRP334 PRO335 HIS336 PHE337 TYR338 ASN339 ILE340 GLU341 GLU342 GLU343 GLU344
Unit 2 SER175 ALA176 ILE177 ILE178 PRO179 ARG180 SER181 SER182 TRP183 LEU184 ALA185 GLN186 LYS187 PRO188 MET189 ASP190 GLU191 PRO192 LEU193 PRO194 LEU195 GLN196 LEU197 PRO198 VAL199 LYS200 TYR201 VAL202 VAL203 ILE204 LEU205 HIS206 THR207 ALA208 THR209 GLU210 SER211 SER212 GLU213 LYS214 ARG215 ALA216 ILE217 ASN218 VAL219 ARG220 LEU221 ILE222 ARG223 ASP224 MET225 GLN226 SER227 PHE228 HIS229 ILE230 GLU231 SER232 ARG233 GLY234 TRP235 ASN236 ASP237 ILE238 ALA239 TYR240 ASN241 PHE242 LEU243 VAL244 GLY245 CYS246 ASP247 GLY248 ASN249 ILE250 TYR251 GLU252 GLY253 ARG254 GLY255 TRP256 LYS257 THR258 VAL259 GLY260 ALA261 HIS262 THR263 LEU264 GLY265 TYR266 ASN267 ARG268 ILE269 SER270 LEU271 GLY272 ILE273 SER274 PHE275 ILE276 GLY277 CYS278 PHE279 MET280 LYS281 GLU282 LEU283 PRO284 THR285 ALA286 ASP287 ALA288 LEU289 ASN290 MET291 CYS292 ARG293 ASN294 LEU295 LEU296 ALA297 ARG298 GLY299 VAL300 GLU301 ASP302 GLY303 HIS304 ILE305 SER306 THR307 ASP308 TYR309 ARG310 LEU311 ILE312 CYS313 HIS314 CYS315 GLN316 CYS317 ASN318 SER319 THR320 GLU321 SER322 PRO323 GLY324 ARG325 ARG326 LEU327 TYR328 GLU329 GLU330 ILE331 GLN332 THR333 TRP334 PRO335 HIS336 PHE337 TYR338 ASN339 ILE340 GLU341 GLU342 GLU343 GLU344
Unit 3 GLY171 HIS172 GLU173 LEU174 SER175 ALA176 ILE177 ILE178 PRO179 ARG180 SER181 SER182 TRP183 LEU184 ALA185 GLN186 LYS187 PRO188 MET189 ASP190 GLU191 PRO192 LEU193 PRO194 LEU195 GLN196 LEU197 PRO198 VAL199 LYS200 TYR201 VAL202 VAL203 ILE204 LEU205 HIS206 THR207 ALA208 THR209 GLU210 SER211 SER212 GLU213 LYS214 ARG215 ALA216 ILE217 ASN218 VAL219 ARG220 LEU221 ILE222 ARG223 ASP224 MET225 GLN226 SER227 PHE228 HIS229 ILE230 GLU231 SER232 ARG233 GLY234 TRP235 ASN236 ASP237 ILE238 ALA239 TYR240 ASN241 PHE242 LEU243 VAL244 GLY245 CYS246 ASP247 GLY248 ASN249 ILE250 TYR251 GLU252 GLY253 ARG254 GLY255 TRP256 LYS257 THR258 VAL259 GLY260 ALA261 HIS262 THR263 LEU264 GLY265 TYR266 ASN267 ARG268 ILE269 SER270 LEU271 GLY272 ILE273 SER274 PHE275 ILE276 GLY277 CYS278 PHE279 MET280 LYS281 GLU282 LEU283 PRO284 THR285 ALA286 ASP287 ALA288 LEU289 ASN290 MET291 CYS292 ARG293 ASN294 LEU295 LEU296 ALA297 ARG298 GLY299 VAL300 GLU301 ASP302 GLY303 HIS304 ILE305 SER306 THR307 ASP308 TYR309 ARG310 LEU311 ILE312 CYS313 HIS314 CYS315 GLN316 CYS317 ASN318 SER319 THR320 GLU321 SER322 PRO323 GLY324 ARG325 ARG326 LEU327 TYR328 GLU329 GLU330 ILE331 GLN332 THR333 TRP334 PRO335 HIS336 PHE337 TYR338 ASN339 ILE340 GLU341 GLU342 GLU343 GLU344
Unit 4 LEU174 SER175 ALA176 ILE177 ILE178 PRO179 ARG180 SER181 SER182 TRP183 LEU184 ALA185 GLN186 LYS187 PRO188 MET189 ASP190 GLU191 PRO192 LEU193 PRO194 LEU195 GLN196 LEU197 PRO198 VAL199 LYS200 TYR201 VAL202 VAL203 ILE204 LEU205 HIS206 THR207 ALA208 THR209 GLU210 SER211 SER212 GLU213 LYS214 ARG215 ALA216 ILE217 ASN218 VAL219 ARG220 LEU221 ILE222 ARG223 ASP224 MET225 GLN226 SER227 PHE228 HIS229 ILE230 GLU231 SER232 ARG233 GLY234 TRP235 ASN236 ASP237 ILE238 ALA239 TYR240 ASN241 PHE242 LEU243 VAL244 GLY245 CYS246 ASP247 GLY248 ASN249 ILE250 TYR251 GLU252 GLY253 ARG254 GLY255 TRP256 LYS257 THR258 VAL259 GLY260 ALA261 HIS262 THR263 LEU264 GLY265 TYR266 ASN267 ARG268 ILE269 SER270 LEU271 GLY272 ILE273 SER274 PHE275 ILE276 GLY277 CYS278 PHE279 MET280 LYS281 GLU282 LEU283 PRO284 THR285 ALA286 ASP287 ALA288 LEU289 ASN290 MET291 CYS292 ARG293 ASN294 LEU295 LEU296 ALA297 ARG298 GLY299 VAL300 GLU301 ASP302 GLY303 HIS304 ILE305 SER306 THR307 ASP308 TYR309 ARG310 LEU311 ILE312 CYS313 HIS314 CYS315 GLN316 CYS317 ASN318 SER319 THR320 GLU321 SER322 PRO323 GLY324 ARG325 ARG326 LEU327 TYR328 GLU329 GLU330 ILE331 GLN332 THR333 TRP334 PRO335 HIS336 PHE337 TYR338 ASN339 ILE340 GLU341 GLU342 GLU343 GLU344
Ligands
Unit 5 GOL1344 MLD1345
Unit 6 MLD1344
Unit 7 MLD1344
Unit 8 MLD1344
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany