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Title | STRUCTURAL BASIS FOR COOPERATIVE BINDING OF RIBBON-HELIX-HEL REPRESSOR OMEGA TO MUTATED DIRECT DNA HEPTAD REPEATS | |
Keywords | TRANSCRIPTIONAL REPRESSOR, INC18 FAMILY OF PLASMIDS, RHH, ME SUPERFAMILY, COOPERATIVE DNA BINDING, DNA HEPTAD 5'- A/T AT 3', PLASMID MAINTENANCE, DNA- BINDING, REGULATORY PROTEIN | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2CAX | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | ORF OMEGA | A | 53 | 428 | 0 |
2 | Protein | ORF OMEGA | B | 50 | 406 | 0 |
3 | Protein | ORF OMEGA | C | 53 | 428 | 0 |
4 | Protein | ORF OMEGA | D | 47 | 381 | 0 |
5 | Other macromolecule | 5'-D(*GP*AP*AP*TP*CP*AP*CP*AP*AP*AP *TP*CP*AP*CP* 3' | G | 17 | 350 | 0 |
6 | Other macromolecule | 5'-D(*TP*TP*GP*TP*GP*AP*TP*TP*TP*GP *TP*GP*AP*TP* 3' | H | 17 | 351 | 0 |
7 | Other macromolecule | 5'-D(*GP*AP*AP*TP*CP*AP*CP*AP*AP*GP *TP*CP*AP*CP*AP*AP*GP*C)-3' | U | 18 | 370 | 0 |
8 | Other macromolecule | 5'-D(*CP*TP*TP*GP*TP*GP*AP*CP*TP*TP *GP*TP*GP*AP*TP*TP*CP*G)-3' | Y | 18 | 369 | 0 |
9 | Water | 42 | 0 | 42 | ||
total | 315 | 3083 | 42 |
Unit 1 | MET19 ALA20 LYS21 LYS22 ASP23 ILE24 MET25 GLY26 ASP27 LYS28 THR29 VAL30 ARG31 VAL32 ARG33 ALA34 ASP35 LEU36 HIS37 HIS38 ILE39 ILE40 LYS41 ILE42 GLU43 THR44 ALA45 LYS46 ASN47 GLY48 GLY49 ASN50 VAL51 LYS52 GLU53 VAL54 MET55 ASP56 GLN57 ALA58 LEU59 GLU60 GLU61 TYR62 ILE63 ARG64 LYS65 TYR66 LEU67 PRO68 ASP69 LYS70 LEU71 |
Unit 2 | LYS22 ASP23 ILE24 MET25 GLY26 ASP27 LYS28 THR29 VAL30 ARG31 VAL32 ARG33 ALA34 ASP35 LEU36 HIS37 HIS38 ILE39 ILE40 LYS41 ILE42 GLU43 THR44 ALA45 LYS46 ASN47 GLY48 GLY49 ASN50 VAL51 LYS52 GLU53 VAL54 MET55 ASP56 GLN57 ALA58 LEU59 GLU60 GLU61 TYR62 ILE63 ARG64 LYS65 TYR66 LEU67 PRO68 ASP69 LYS70 LEU71 |
Unit 3 | MET19 ALA20 LYS21 LYS22 ASP23 ILE24 MET25 GLY26 ASP27 LYS28 THR29 VAL30 ARG31 VAL32 ARG33 ALA34 ASP35 LEU36 HIS37 HIS38 ILE39 ILE40 LYS41 ILE42 GLU43 THR44 ALA45 LYS46 ASN47 GLY48 GLY49 ASN50 VAL51 LYS52 GLU53 VAL54 MET55 ASP56 GLN57 ALA58 LEU59 GLU60 GLU61 TYR62 ILE63 ARG64 LYS65 TYR66 LEU67 PRO68 ASP69 LYS70 LEU71 |
Unit 4 | MET25 GLY26 ASP27 LYS28 THR29 VAL30 ARG31 VAL32 ARG33 ALA34 ASP35 LEU36 HIS37 HIS38 ILE39 ILE40 LYS41 ILE42 GLU43 THR44 ALA45 LYS46 ASN47 GLY48 GLY49 ASN50 VAL51 LYS52 GLU53 VAL54 MET55 ASP56 GLN57 ALA58 LEU59 GLU60 GLU61 TYR62 ILE63 ARG64 LYS65 TYR66 LEU67 PRO68 ASP69 LYS70 LEU71 |
Unit 5 | DG2 DA3 DA4 DT5 DC6 DA7 DC8 DA9 DA10 DA11 DT12 DC13 DA14 DC15 DA16 DA17 DG18 |
Unit 6 | DT22 DT23 DG24 DT25 DG26 DA27 DT28 DT29 DT30 DG31 DT32 DG33 DA34 DT35 DT36 DC37 DG38 |
Unit 7 | DG1 DA2 DA3 DT4 DC5 DA6 DC7 DA8 DA9 DG10 DT11 DC12 DA13 DC14 DA15 DA16 DG17 DC18 |
Unit 8 | DC21 DT22 DT23 DG24 DT25 DG26 DA27 DC28 DT29 DT30 DG31 DT32 DG33 DA34 DT35 DT36 DC37 DG38 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |