2C5C - Sequence, Chains, Asymmetric and Biological Units

• Title: SHIGA-LIKE TOXIN 1 B SUBUNIT COMPLEXED WITH A BIVALENT INHIB
• Keywords: BACTERIAL EXOTOXIN, GB3 BINDING ACTIVITY, BIVALENT LIGAND, P CARBOHYDRATE RECOGNITION, OB FOLD, TOXIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2C5C	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	SHIGA-LIKE TOXIN 1 B SUBUNIT	A	69	540	0
2	Protein	SHIGA-LIKE TOXIN 1 B SUBUNIT	B	69	540	0
3	Protein	SHIGA-LIKE TOXIN 1 B SUBUNIT	C	69	540	0
4	Protein	SHIGA-LIKE TOXIN 1 B SUBUNIT	D	69	540	0
5	Protein	SHIGA-LIKE TOXIN 1 B SUBUNIT	E	69	540	0
6	Protein	SHIGA-LIKE TOXIN 1 B SUBUNIT	F	69	540	0
7	Protein	SHIGA-LIKE TOXIN 1 B SUBUNIT	G	69	540	0
8	Protein	SHIGA-LIKE TOXIN 1 B SUBUNIT	H	69	540	0
9	Protein	SHIGA-LIKE TOXIN 1 B SUBUNIT	I	69	540	0
10	Protein	SHIGA-LIKE TOXIN 1 B SUBUNIT	J	69	540	0
11	Ligand		K	3	0	34
12	Ligand		L	3	0	34
13	Ligand		M	3	0	34
14	Ligand		N	3	0	34
15	Ligand		O	3	0	34
16	Ligand		P	2	0	22
17	Ligand		Q	3	0	34
18	Ligand		R	2	0	22
19	Ligand		S	3	0	34
20	Ligand		T	3	0	34
21	Ligand		U	2	0	22
22	Ligand		V	3	0	34
23	Ligand		W	2	0	22
24	Ligand		X	2	0	22
25	Ligand		Y	3	0	34
26	Ligand		Z	2	0	22
27	Ligand		a	3	0	34
28	Ligand		b	3	0	34
29	Ligand		c	3	0	34
30	Ligand		d	3	0	34
31	Ligand	SHIGA-LIKE TOXIN 1 B SUBUNIT	A	1	0	15
32	Ligand	SHIGA-LIKE TOXIN 1 B SUBUNIT	C	2	0	26
33	Ligand	SHIGA-LIKE TOXIN 1 B SUBUNIT	D	1	0	15
34	Ligand	SHIGA-LIKE TOXIN 1 B SUBUNIT	E	1	0	5
35	Ligand	SHIGA-LIKE TOXIN 1 B SUBUNIT	F	1	0	9
36	Ligand	SHIGA-LIKE TOXIN 1 B SUBUNIT	I	2	0	20
37	Ligand	SHIGA-LIKE TOXIN 1 B SUBUNIT	J	2	0	20
38	Water			16	0	18
total				770	5400	736

Proteins

Unit 1	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69
Unit 2	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69
Unit 3	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69
Unit 4	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69
Unit 5	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69
Unit 6	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69
Unit 7	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69
Unit 8	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69
Unit 9	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69
Unit 10	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69

Ligands

Unit 11	GLC 1 GAL 2 GLA 3
Unit 12	GLC 1 GAL 2 GLA 3
Unit 13	GLC 1 GAL 2 GLA 3
Unit 14	GLC 1 GAL 2 GLA 3
Unit 15	GLC 1 GAL 2 GLA 3
Unit 16	GLA 1 GLA 2
Unit 17	GLC 1 GAL 2 GLA 3
Unit 18	GLA 1 GLA 2
Unit 19	BGC 1 GAL 2 GLA 3
Unit 20	BGC 1 GAL 2 GLA 3
Unit 21	GLA 1 GLA 2
Unit 22	GLC 1 GAL 2 GLA 3
Unit 23	GLA 1 GLA 2
Unit 24	GLA 1 GLA 2
Unit 25	GLC 1 GAL 2 GLA 3
Unit 26	GLA 1 GLA 2
Unit 27	BGC 1 GLA 2 GLA 3
Unit 28	BGC 1 GLA 2 GLA 3
Unit 29	GLC 1 GAL 2 GLA 3
Unit 30	GLC 1 GAL 2 GLA 3
Unit 31	S10 1076
Unit 32	GLA 1070 S10 1073
Unit 33	S10 1075
Unit 34	S10 1075
Unit 35	S10 1073
Unit 36	S10 1075 SO4 1076
Unit 37	S10 1076 S10 1077