2C3D - Sequence, Chains, Asymmetric and Biological Units

• Title: 2.15 ANGSTROM CRYSTAL STRUCTURE OF 2-KETOPROPYL COENZYME M OXIDOREDUCTASE CARBOXYLASE WITH A COENZYME M DISULFIDE BOUND AT THE ACTIVE SITE
• Keywords: OXIDOREDUCTASE, COENZYME M, COM DISULFIDE, REDOX-ACTIVE CENTER, FAD
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2C3D	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	2-OXOPROPYL-COM REDUCTASE	A	522	4023	0
2	Protein	2-OXOPROPYL-COM REDUCTASE	B	522	4023	0
3	Ligand	2-OXOPROPYL-COM REDUCTASE	A	3	0	67
4	Ligand	2-OXOPROPYL-COM REDUCTASE	B	3	0	67
5	Water			654	0	654
total				1704	8046	788

Proteins

Unit 1

LYS 2 VAL 3 TRP 4 ASN 5 ALA 6 ARG 7 ASN 8 ASP 9 HIS 10 LEU 11 THR 12 ILE 13 ASN 14 GLN 15 TRP 16 ALA 17 THR 18 ARG 19 ILE 20 ASP 21 GLU 22 ILE 23 LEU 24 GLU 25 ALA 26 PRO 27 ASP 28 GLY 29 GLY 30 GLU 31 VAL 32 ILE 33 TYR 34 ASN 35 VAL 36 ASP 37 GLU 38 ASN 39 ASP 40 PRO 41 ARG 42 GLU 43 TYR 44 ASP 45 ALA 46 ILE 47 PHE 48 ILE 49 GLY 50 GLY 51 GLY 52 ALA 53 ALA 54 GLY 55 ARG 56 PHE 57 GLY 58 SER 59 ALA 60 TYR 61 LEU 62 ARG 63 ALA 64 MET 65 GLY 66 GLY 67 ARG 68 GLN 69 LEU 70 ILE 71 VAL 72 ASP 73 ARG 74 TRP 75 PRO 76 PHE 77 LEU 78 GLY 79 GLY 80 SER 81 CYS 82 PRO 83 HIS 84 ASN 85 ALA 86 CYS 87 VAL 88 PRO 89 HIS 90 HIS 91 LEU 92 PHE 93 SER 94 ASP 95 CYS 96 ALA 97 ALA 98 GLU 99 LEU 100 MET 101 LEU 102 ALA 103 ARG 104 THR 105 PHE 106 SER 107 GLY 108 GLN 109 TYR 110 TRP 111 PHE 112 PRO 113 ASP 114 MET 115 THR 116 GLU 117 LYS 118 VAL 119 VAL 120 GLY 121 ILE 122 LYS 123 GLU 124 VAL 125 VAL 126 ASP 127 LEU 128 PHE 129 ARG 130 ALA 131 GLY 132 ARG 133 ASN 134 GLY 135 PRO 136 HIS 137 GLY 138 ILE 139 MET 140 ASN 141 PHE 142 GLN 143 SER 144 LYS 145 GLU 146 GLN 147 LEU 148 ASN 149 LEU 150 GLU 151 TYR 152 ILE 153 LEU 154 ASN 155 CYS 156 PRO 157 ALA 158 LYS 159 VAL 160 ILE 161 ASP 162 ASN 163 HIS 164 THR 165 VAL 166 GLU 167 ALA 168 ALA 169 GLY 170 LYS 171 VAL 172 PHE 173 LYS 174 ALA 175 LYS 176 ASN 177 LEU 178 ILE 179 LEU 180 ALA 181 VAL 182 GLY 183 ALA 184 GLY 185 PRO 186 GLY 187 THR 188 LEU 189 ASP 190 VAL 191 PRO 192 GLY 193 VAL 194 ASN 195 ALA 196 LYS 197 GLY 198 VAL 199 PHE 200 ASP 201 HIS 202 ALA 203 THR 204 LEU 205 VAL 206 GLU 207 GLU 208 LEU 209 ASP 210 TYR 211 GLU 212 PRO 213 GLY 214 SER 215 THR 216 VAL 217 VAL 218 VAL 219 VAL 220 GLY 221 GLY 222 SER 223 LYS 224 THR 225 ALA 226 VAL 227 GLU 228 TYR 229 GLY 230 CYS 231 PHE 232 PHE 233 ASN 234 ALA 235 THR 236 GLY 237 ARG 238 ARG 239 THR 240 VAL 241 MET 242 LEU 243 VAL 244 ARG 245 THR 246 GLU 247 PRO 248 LEU 249 LYS 250 LEU 251 ILE 252 LYS 253 ASP 254 ASN 255 GLU 256 THR 257 ARG 258 ALA 259 TYR 260 VAL 261 LEU 262 ASP 263 ARG 264 MET 265 LYS 266 GLU 267 GLN 268 GLY 269 MET 270 GLU 271 ILE 272 ILE 273 SER 274 GLY 275 SER 276 ASN 277 VAL 278 THR 279 ARG 280 ILE 281 GLU 282 GLU 283 ASP 284 ALA 285 ASN 286 GLY 287 ARG 288 VAL 289 GLN 290 ALA 291 VAL 292 VAL 293 ALA 294 MET 295 THR 296 PRO 297 ASN 298 GLY 299 GLU 300 MET 301 ARG 302 ILE 303 GLU 304 THR 305 ASP 306 PHE 307 VAL 308 PHE 309 LEU 310 GLY 311 LEU 312 GLY 313 GLU 314 GLN 315 PRO 316 ARG 317 SER 318 ALA 319 GLU 320 LEU 321 ALA 322 LYS 323 ILE 324 LEU 325 GLY 326 LEU 327 ASP 328 LEU 329 GLY 330 PRO 331 LYS 332 GLY 333 GLU 334 VAL 335 LEU 336 VAL 337 ASN 338 GLU 339 TYR 340 LEU 341 GLN 342 THR 343 SER 344 VAL 345 PRO 346 ASN 347 VAL 348 TYR 349 ALA 350 VAL 351 GLY 352 ASP 353 LEU 354 ILE 355 GLY 356 GLY 357 PRO 358 MET 359 GLU 360 MET 361 PHE 362 LYS 363 ALA 364 ARG 365 LYS 366 SER 367 GLY 368 CYS 369 TYR 370 ALA 371 ALA 372 ARG 373 ASN 374 VAL 375 MET 376 GLY 377 GLU 378 LYS 379 ILE 380 SER 381 TYR 382 THR 383 PRO 384 LYS 385 ASN 386 TYR 387 PRO 388 ASP 389 PHE 390 LEU 391 HIS 392 THR 393 HIS 394 TYR 395 GLU 396 VAL 397 SER 398 PHE 399 LEU 400 GLY 401 MET 402 GLY 403 GLU 404 GLU 405 GLU 406 ALA 407 ARG 408 ALA 409 ALA 410 GLY 411 HIS 412 GLU 413 ILE 414 VAL 415 THR 416 ILE 417 LYS 418 MET 419 PRO 420 PRO 421 ASP 422 THR 423 GLU 424 ASN 425 GLY 426 LEU 427 ASN 428 VAL 429 ALA 430 LEU 431 PRO 432 ALA 433 SER 434 ASP 435 ARG 436 THR 437 MET 438 LEU 439 TYR 440 ALA 441 PHE 442 GLY 443 LYS 444 GLY 445 THR 446 ALA 447 HIS 448 MET 449 SER 450 GLY 451 PHE 452 GLN 453 LYS 454 ILE 455 VAL 456 ILE 457 ASP 458 ALA 459 LYS 460 THR 461 ARG 462 LYS 463 VAL 464 LEU 465 GLY 466 ALA 467 HIS 468 HIS 469 VAL 470 GLY 471 TYR 472 GLY 473 ALA 474 LYS 475 ASP 476 ALA 477 PHE 478 GLN 479 TYR 480 LEU 481 ASN 482 VAL 483 LEU 484 ILE 485 LYS 486 GLN 487 GLY 488 LEU 489 THR 490 VAL 491 ASP 492 GLU 493 LEU 494 GLY 495 ASP 496 MET 497 ASP 498 GLU 499 LEU 500 PHE 501 LEU 502 ASN 503 PRO 504 THR 505 HIS 506 PHE 507 ILE 508 GLN 509 LEU 510 SER 511 ARG 512 LEU 513 ARG 514 ALA 515 GLY 516 SER 517 LYS 518 ASN 519 LEU 520 VAL 521 SER 522 LEU 523

Unit 2

LYS 2 VAL 3 TRP 4 ASN 5 ALA 6 ARG 7 ASN 8 ASP 9 HIS 10 LEU 11 THR 12 ILE 13 ASN 14 GLN 15 TRP 16 ALA 17 THR 18 ARG 19 ILE 20 ASP 21 GLU 22 ILE 23 LEU 24 GLU 25 ALA 26 PRO 27 ASP 28 GLY 29 GLY 30 GLU 31 VAL 32 ILE 33 TYR 34 ASN 35 VAL 36 ASP 37 GLU 38 ASN 39 ASP 40 PRO 41 ARG 42 GLU 43 TYR 44 ASP 45 ALA 46 ILE 47 PHE 48 ILE 49 GLY 50 GLY 51 GLY 52 ALA 53 ALA 54 GLY 55 ARG 56 PHE 57 GLY 58 SER 59 ALA 60 TYR 61 LEU 62 ARG 63 ALA 64 MET 65 GLY 66 GLY 67 ARG 68 GLN 69 LEU 70 ILE 71 VAL 72 ASP 73 ARG 74 TRP 75 PRO 76 PHE 77 LEU 78 GLY 79 GLY 80 SER 81 CYS 82 PRO 83 HIS 84 ASN 85 ALA 86 CYS 87 VAL 88 PRO 89 HIS 90 HIS 91 LEU 92 PHE 93 SER 94 ASP 95 CYS 96 ALA 97 ALA 98 GLU 99 LEU 100 MET 101 LEU 102 ALA 103 ARG 104 THR 105 PHE 106 SER 107 GLY 108 GLN 109 TYR 110 TRP 111 PHE 112 PRO 113 ASP 114 MET 115 THR 116 GLU 117 LYS 118 VAL 119 VAL 120 GLY 121 ILE 122 LYS 123 GLU 124 VAL 125 VAL 126 ASP 127 LEU 128 PHE 129 ARG 130 ALA 131 GLY 132 ARG 133 ASN 134 GLY 135 PRO 136 HIS 137 GLY 138 ILE 139 MET 140 ASN 141 PHE 142 GLN 143 SER 144 LYS 145 GLU 146 GLN 147 LEU 148 ASN 149 LEU 150 GLU 151 TYR 152 ILE 153 LEU 154 ASN 155 CYS 156 PRO 157 ALA 158 LYS 159 VAL 160 ILE 161 ASP 162 ASN 163 HIS 164 THR 165 VAL 166 GLU 167 ALA 168 ALA 169 GLY 170 LYS 171 VAL 172 PHE 173 LYS 174 ALA 175 LYS 176 ASN 177 LEU 178 ILE 179 LEU 180 ALA 181 VAL 182 GLY 183 ALA 184 GLY 185 PRO 186 GLY 187 THR 188 LEU 189 ASP 190 VAL 191 PRO 192 GLY 193 VAL 194 ASN 195 ALA 196 LYS 197 GLY 198 VAL 199 PHE 200 ASP 201 HIS 202 ALA 203 THR 204 LEU 205 VAL 206 GLU 207 GLU 208 LEU 209 ASP 210 TYR 211 GLU 212 PRO 213 GLY 214 SER 215 THR 216 VAL 217 VAL 218 VAL 219 VAL 220 GLY 221 GLY 222 SER 223 LYS 224 THR 225 ALA 226 VAL 227 GLU 228 TYR 229 GLY 230 CYS 231 PHE 232 PHE 233 ASN 234 ALA 235 THR 236 GLY 237 ARG 238 ARG 239 THR 240 VAL 241 MET 242 LEU 243 VAL 244 ARG 245 THR 246 GLU 247 PRO 248 LEU 249 LYS 250 LEU 251 ILE 252 LYS 253 ASP 254 ASN 255 GLU 256 THR 257 ARG 258 ALA 259 TYR 260 VAL 261 LEU 262 ASP 263 ARG 264 MET 265 LYS 266 GLU 267 GLN 268 GLY 269 MET 270 GLU 271 ILE 272 ILE 273 SER 274 GLY 275 SER 276 ASN 277 VAL 278 THR 279 ARG 280 ILE 281 GLU 282 GLU 283 ASP 284 ALA 285 ASN 286 GLY 287 ARG 288 VAL 289 GLN 290 ALA 291 VAL 292 VAL 293 ALA 294 MET 295 THR 296 PRO 297 ASN 298 GLY 299 GLU 300 MET 301 ARG 302 ILE 303 GLU 304 THR 305 ASP 306 PHE 307 VAL 308 PHE 309 LEU 310 GLY 311 LEU 312 GLY 313 GLU 314 GLN 315 PRO 316 ARG 317 SER 318 ALA 319 GLU 320 LEU 321 ALA 322 LYS 323 ILE 324 LEU 325 GLY 326 LEU 327 ASP 328 LEU 329 GLY 330 PRO 331 LYS 332 GLY 333 GLU 334 VAL 335 LEU 336 VAL 337 ASN 338 GLU 339 TYR 340 LEU 341 GLN 342 THR 343 SER 344 VAL 345 PRO 346 ASN 347 VAL 348 TYR 349 ALA 350 VAL 351 GLY 352 ASP 353 LEU 354 ILE 355 GLY 356 GLY 357 PRO 358 MET 359 GLU 360 MET 361 PHE 362 LYS 363 ALA 364 ARG 365 LYS 366 SER 367 GLY 368 CYS 369 TYR 370 ALA 371 ALA 372 ARG 373 ASN 374 VAL 375 MET 376 GLY 377 GLU 378 LYS 379 ILE 380 SER 381 TYR 382 THR 383 PRO 384 LYS 385 ASN 386 TYR 387 PRO 388 ASP 389 PHE 390 LEU 391 HIS 392 THR 393 HIS 394 TYR 395 GLU 396 VAL 397 SER 398 PHE 399 LEU 400 GLY 401 MET 402 GLY 403 GLU 404 GLU 405 GLU 406 ALA 407 ARG 408 ALA 409 ALA 410 GLY 411 HIS 412 GLU 413 ILE 414 VAL 415 THR 416 ILE 417 LYS 418 MET 419 PRO 420 PRO 421 ASP 422 THR 423 GLU 424 ASN 425 GLY 426 LEU 427 ASN 428 VAL 429 ALA 430 LEU 431 PRO 432 ALA 433 SER 434 ASP 435 ARG 436 THR 437 MET 438 LEU 439 TYR 440 ALA 441 PHE 442 GLY 443 LYS 444 GLY 445 THR 446 ALA 447 HIS 448 MET 449 SER 450 GLY 451 PHE 452 GLN 453 LYS 454 ILE 455 VAL 456 ILE 457 ASP 458 ALA 459 LYS 460 THR 461 ARG 462 LYS 463 VAL 464 LEU 465 GLY 466 ALA 467 HIS 468 HIS 469 VAL 470 GLY 471 TYR 472 GLY 473 ALA 474 LYS 475 ASP 476 ALA 477 PHE 478 GLN 479 TYR 480 LEU 481 ASN 482 VAL 483 LEU 484 ILE 485 LYS 486 GLN 487 GLY 488 LEU 489 THR 490 VAL 491 ASP 492 GLU 493 LEU 494 GLY 495 ASP 496 MET 497 ASP 498 GLU 499 LEU 500 PHE 501 LEU 502 ASN 503 PRO 504 THR 505 HIS 506 PHE 507 ILE 508 GLN 509 LEU 510 SER 511 ARG 512 LEU 513 ARG 514 ALA 515 GLY 516 SER 517 LYS 518 ASN 519 LEU 520 VAL 521 SER 522 LEU 523

Ligands

Unit 3	FAD 1524 COM 1525 COM 1526
Unit 4	FAD 1524 COM 1525 COM 1526