2C3A - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF UNLIGANDED HSV GD REVEALS A MECHANISM FOR RECEP MEDIATED ACTIVATION OF VIRUS ENTRY
• Keywords: VIRUS, HERPES SIMPLEX VIRUS, HSV-1, GLYCOPROTEIN D, VIRAL PR
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2C3A	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	GLYCOPROTEIN D	A	253	1959	0
2	Protein	GLYCOPROTEIN D	B	274	2108	0
3	Ligand		C	2	0	28
4	Ligand		D	2	0	28
5	Ligand	GLYCOPROTEIN D	A	2	0	2
6	Ligand	GLYCOPROTEIN D	B	7	0	7
7	Water			53	0	53
total				593	4067	118

Proteins

Unit 1

VAL 24 LEU 25 ASP 26 GLN 27 LEU 28 THR 29 ASP 30 PRO 31 PRO 32 GLY 33 VAL 34 ARG 35 ARG 36 CYS 37 TYR 38 HIS 39 ILE 40 GLN 41 ALA 42 GLY 43 LEU 44 PRO 45 ASP 46 PRO 47 PHE 48 GLN 49 PRO 50 PRO 51 SER 52 LEU 53 PRO 54 ILE 55 THR 56 VAL 57 TYR 58 TYR 59 ALA 60 VAL 61 LEU 62 GLU 63 ARG 64 ALA 65 CYS 66 ARG 67 SER 68 VAL 69 LEU 70 LEU 71 ASN 72 ALA 73 PRO 74 SER 75 GLU 76 ALA 77 PRO 78 GLN 79 ILE 80 VAL 81 ARG 82 GLY 83 ALA 84 SER 85 GLU 86 ASP 87 VAL 88 ARG 89 LYS 90 GLN 91 PRO 92 TYR 93 ASN 94 LEU 95 THR 96 ILE 97 ALA 98 TRP 99 PHE 100 ARG 101 MET 102 GLY 103 GLY 104 ASN 105 CYS 106 ALA 107 ILE 108 PRO 109 ILE 110 THR 111 VAL 112 MET 113 GLU 114 TYR 115 THR 116 GLU 117 CYS 118 SER 119 TYR 120 ASN 121 LYS 122 SER 123 LEU 124 GLY 125 ALA 126 CYS 127 PRO 128 ILE 129 ARG 130 THR 131 GLN 132 PRO 133 ARG 134 TRP 135 ASN 136 TYR 137 TYR 138 ASP 139 SER 140 PHE 141 SER 142 ALA 143 VAL 144 SER 145 GLU 146 ASP 147 ASN 148 LEU 149 GLY 150 PHE 151 LEU 152 MET 153 HIS 154 ALA 155 PRO 156 ALA 157 PHE 158 GLU 159 THR 160 ALA 161 GLY 162 THR 163 TYR 164 LEU 165 ARG 166 LEU 167 VAL 168 LYS 169 ILE 170 ASN 171 ASP 172 TRP 173 THR 174 GLU 175 ILE 176 THR 177 GLN 178 PHE 179 ILE 180 LEU 181 GLU 182 HIS 183 ARG 184 ALA 185 LYS 186 GLY 187 SER 188 CYS 189 LYS 190 TYR 191 ALA 192 LEU 193 PRO 194 LEU 195 ARG 196 ILE 197 PRO 198 PRO 199 SER 200 ALA 201 CYS 202 LEU 203 SER 204 PRO 205 GLN 206 ALA 207 TYR 208 GLN 209 GLN 210 GLY 211 VAL 212 THR 213 VAL 214 ASP 215 SER 216 ILE 217 GLY 218 MET 219 LEU 220 PRO 221 ARG 222 PHE 223 ILE 224 PRO 225 GLU 226 ASN 227 GLN 228 ARG 229 THR 230 VAL 231 ALA 232 VAL 233 TYR 234 SER 235 LEU 236 LYS 237 ILE 238 ALA 239 GLY 240 TRP 241 HIS 242 GLY 243 PRO 244 LYS 245 ALA 246 PRO 247 TYR 248 THR 249 SER 250 THR 251 LEU 252 LEU 253 PRO 254 PRO 255 VAL 286 ALA 287 PRO 288 GLN 289 ILE 290 PRO 291 PRO 292 ASN 293 TRP 294 HIS 295 ILE 296 PRO 297 SER 298 ILE 299 GLN 300 ASP 301 CYS 302 ALA 303 THR 304 PRO 305 TYR 306

Unit 2

LEU 22 PRO 23 VAL 24 LEU 25 ASP 26 GLN 27 LEU 28 THR 29 ASP 30 PRO 31 PRO 32 GLY 33 VAL 34 ARG 35 ARG 36 CYS 37 TYR 38 HIS 39 ILE 40 GLN 41 ALA 42 GLY 43 LEU 44 PRO 45 ASP 46 PRO 47 PHE 48 GLN 49 PRO 50 PRO 51 SER 52 LEU 53 PRO 54 ILE 55 THR 56 VAL 57 TYR 58 TYR 59 ALA 60 VAL 61 LEU 62 GLU 63 ARG 64 ALA 65 CYS 66 ARG 67 SER 68 VAL 69 LEU 70 LEU 71 ASN 72 ALA 73 PRO 74 SER 75 GLU 76 ALA 77 PRO 78 GLN 79 ILE 80 VAL 81 ARG 82 GLY 83 ALA 84 SER 85 GLU 86 ASP 87 VAL 88 ARG 89 LYS 90 GLN 91 PRO 92 TYR 93 ASN 94 LEU 95 THR 96 ILE 97 ALA 98 TRP 99 PHE 100 ARG 101 MET 102 GLY 103 GLY 104 ASN 105 CYS 106 ALA 107 ILE 108 PRO 109 ILE 110 THR 111 VAL 112 MET 113 GLU 114 TYR 115 THR 116 GLU 117 CYS 118 SER 119 TYR 120 ASN 121 LYS 122 SER 123 LEU 124 GLY 125 ALA 126 CYS 127 PRO 128 ILE 129 ARG 130 THR 131 GLN 132 PRO 133 ARG 134 TRP 135 ASN 136 TYR 137 TYR 138 ASP 139 SER 140 PHE 141 SER 142 ALA 143 VAL 144 SER 145 GLU 146 ASP 147 ASN 148 LEU 149 GLY 150 PHE 151 LEU 152 MET 153 HIS 154 ALA 155 PRO 156 ALA 157 PHE 158 GLU 159 THR 160 ALA 161 GLY 162 THR 163 TYR 164 LEU 165 ARG 166 LEU 167 VAL 168 LYS 169 ILE 170 ASN 171 ASP 172 TRP 173 THR 174 GLU 175 ILE 176 THR 177 GLN 178 PHE 179 ILE 180 LEU 181 GLU 182 HIS 183 ARG 184 ALA 185 LYS 186 GLY 187 SER 188 CYS 189 LYS 190 TYR 191 ALA 192 LEU 193 PRO 194 LEU 195 ARG 196 ILE 197 PRO 198 PRO 199 SER 200 ALA 201 CYS 202 LEU 203 SER 204 PRO 205 GLN 206 ALA 207 TYR 208 GLN 209 GLN 210 GLY 211 VAL 212 THR 213 VAL 214 ASP 215 SER 216 ILE 217 GLY 218 MET 219 LEU 220 PRO 221 ARG 222 PHE 223 ILE 224 PRO 225 GLU 226 ASN 227 GLN 228 ARG 229 THR 230 VAL 231 ALA 232 VAL 233 TYR 234 SER 235 LEU 236 LYS 237 ILE 238 ALA 239 GLY 240 TRP 241 HIS 242 GLY 243 PRO 244 LYS 245 ALA 246 PRO 247 TYR 248 THR 249 SER 250 THR 251 LEU 252 LEU 253 PRO 254 PRO 255 GLU 256 LEU 257 PRO 270 GLU 271 ASP 272 PRO 273 GLU 274 ASP 275 SER 276 ALA 277 LEU 278 LEU 279 GLU 280 ASP 281 PRO 282 VAL 283 GLY 284 THR 285 VAL 286 ALA 287 PRO 288 GLN 289 ILE 290 PRO 291 PRO 292 ASN 293 TRP 294 HIS 295 ILE 296 PRO 297 SER 298 ILE 299 GLN 300 ASP 301 CYS 302 ALA 303 THR 304 PRO 305 TYR 306 HIS 307

Ligands

Unit 3	NAG 1 NAG 2
Unit 4	NAG 1 NAG 2
Unit 5	CL 1309 ZN 1310
Unit 6	CL 1310 NA 1311 NA 1312 ZN 1313 ZN 1314 ZN 1315 ZN 1316