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Title | STRUCTURAL BASIS FOR COOPERATIVE BINDING OF RIBBON-HELIX- HELIX OMEGA REPRESSOR TO INVERTED DNA HEPTAD REPEATS | |
Keywords | DNA BINDING PROTEIN-DNA COMPLEX, RIBBON-HELIX-HELIX, RHH, ME SUPERFAMILY, COOPERATIVE DNA BINDING, INC18 FAMILY | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2BNZ | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | ORF OMEGA | A | 50 | 406 | 0 |
2 | Protein | ORF OMEGA | B | 50 | 406 | 0 |
3 | Protein | ORF OMEGA | C | 52 | 420 | 0 |
4 | Protein | ORF OMEGA | D | 47 | 381 | 0 |
5 | Other macromolecule | 5'-D(*GP*AP*AP*TP*CP*AP*CP*AP*AP*GP *TP*GP*AP*TP*TP*AP*GP*C)-3' | E | 17 | 353 | 0 |
6 | Other macromolecule | 5'-D(*CP*TP*AP*AP*TP*CP*AP*CP*TP*TP *GP*TP*GP*AP*TP*TP*CP*G)-3' | F | 18 | 366 | 0 |
7 | Other macromolecule | 5'-D(*GP*AP*AP*TP*CP*AP*CP*AP*AP*GP *TP*GP*AP*TP*TP*AP*GP*C)-3' | G | 5 | 106 | 0 |
8 | Other macromolecule | 5'-D(*CP*TP*AP*AP*TP*CP*AP*CP*TP*TP *GP*TP*GP*AP*TP*TP*CP*G)-3' | H | 5 | 102 | 0 |
9 | Water | 45 | 0 | 45 | ||
total | 289 | 2540 | 45 |
Unit 1 | LYS22 ASP23 ILE24 MET25 GLY26 ASP27 LYS28 THR29 VAL30 ARG31 VAL32 ARG33 ALA34 ASP35 LEU36 HIS37 HIS38 ILE39 ILE40 LYS41 ILE42 GLU43 THR44 ALA45 LYS46 ASN47 GLY48 GLY49 ASN50 VAL51 LYS52 GLU53 VAL54 MET55 ASP56 GLN57 ALA58 LEU59 GLU60 GLU61 TYR62 ILE63 ARG64 LYS65 TYR66 LEU67 PRO68 ASP69 LYS70 LEU71 |
Unit 2 | LYS22 ASP23 ILE24 MET25 GLY26 ASP27 LYS28 THR29 VAL30 ARG31 VAL32 ARG33 ALA34 ASP35 LEU36 HIS37 HIS38 ILE39 ILE40 LYS41 ILE42 GLU43 THR44 ALA45 LYS46 ASN47 GLY48 GLY49 ASN50 VAL51 LYS52 GLU53 VAL54 MET55 ASP56 GLN57 ALA58 LEU59 GLU60 GLU61 TYR62 ILE63 ARG64 LYS65 TYR66 LEU67 PRO68 ASP69 LYS70 LEU71 |
Unit 3 | ALA20 LYS21 LYS22 ASP23 ILE24 MET25 GLY26 ASP27 LYS28 THR29 VAL30 ARG31 VAL32 ARG33 ALA34 ASP35 LEU36 HIS37 HIS38 ILE39 ILE40 LYS41 ILE42 GLU43 THR44 ALA45 LYS46 ASN47 GLY48 GLY49 ASN50 VAL51 LYS52 GLU53 VAL54 MET55 ASP56 GLN57 ALA58 LEU59 GLU60 GLU61 TYR62 ILE63 ARG64 LYS65 TYR66 LEU67 PRO68 ASP69 LYS70 LEU71 |
Unit 4 | MET25 GLY26 ASP27 LYS28 THR29 VAL30 ARG31 VAL32 ARG33 ALA34 ASP35 LEU36 HIS37 HIS38 ILE39 ILE40 LYS41 ILE42 GLU43 THR44 ALA45 LYS46 ASN47 GLY48 GLY49 ASN50 VAL51 LYS52 GLU53 VAL54 MET55 ASP56 GLN57 ALA58 LEU59 GLU60 GLU61 TYR62 ILE63 ARG64 LYS65 TYR66 LEU67 PRO68 ASP69 LYS70 LEU71 |
Unit 5 | DG1 DA2 DA3 DT4 DC5 DA6 DC7 DA8 DA9 DG10 DT11 DG12 DA13 DT14 DT15 DA16 DG17 |
Unit 6 | DC19 DT20 DA21 DA22 DT23 DC24 DA25 DC26 DT27 DT28 DG29 DT30 DG31 DA32 DT33 DT34 DC35 DG36 |
Unit 7 | DG1 DA2 DA3 DT4 DG17 |
Unit 8 | DA32 DT33 DT34 DC35 DG36 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |