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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HETERODIMERIC L. DONOVANI TOPOISOMERASE VANADATE-DNA COMPLEX
Keywords TOPOISOMERASE I, VANADATE COMPLEX, ISOMERASE-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2B9S     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Other macromolecule   5'-D(*AP*AP*AP*AP*AP*GP*AP*CP*TP*T)-3'  C 10 204 0
2  Other macromolecule   5'-D(*AP*GP*AP*AP*AP*AP*AP*TP*TP*TP*TP*T)-3'  D 12 245 0
3  Other macromolecule   5'-D(*AP*AP*AP*AP*AP*TP*TP*TP*TP*TP*CP*TP*AP*AP*G *TP*TP*TP*T)-3'  E 22 440 0
4  Protein   TOPOISOMERASE I-LIKE PROTEIN  A 426 3336 0
5  Protein   DNA TOPOISOMERASE I-LIKE PROTEIN  B 52 379 0
6  Ligand   DNA TOPOISOMERASE I-LIKE PROTEIN  B 1 0 3
7 Water     130 0 130
total       653 4604 133

Proteins
Unit 4 ASP27 LEU28 ASN29 TRP30 TRP31 GLU32 GLN33 GLU34 ASN35 LEU36 ARG37 ILE38 ALA39 MET40 LYS41 GLY42 GLU43 ARG44 ARG45 TRP46 GLU47 THR48 LEU49 ALA50 HIS51 ASN52 GLY53 VAL54 LEU55 PHE56 PRO57 PRO58 GLU59 TYR60 GLU61 PRO62 HIS63 GLY64 ILE65 PRO66 ILE67 PHE68 TYR69 ASP70 GLY71 ARG72 GLU73 PHE74 LYS75 MET76 THR77 PRO78 GLU79 GLU80 GLU81 GLU82 VAL83 ALA84 THR85 MET86 PHE87 ALA88 VAL89 MET90 LYS91 GLU92 HIS93 ASP94 TYR95 TYR96 ARG97 MET98 GLU99 VAL100 PHE101 ARG102 ARG103 ASN104 PHE105 PHE106 GLU107 SER108 TRP109 ARG110 GLU111 ILE112 LEU113 ASP114 LYS115 ARG116 GLN117 HIS118 PRO119 ILE120 ARG121 ARG122 LEU123 GLU124 LEU125 CYS126 ASP127 PHE128 GLU129 PRO130 ILE131 TYR132 GLN133 TRP134 HIS135 LEU136 VAL137 GLN138 ARG139 GLU140 LYS141 LYS142 LEU143 SER144 ARG145 THR146 LYS147 GLU148 GLU149 LYS150 LYS151 ALA152 ILE153 LYS154 GLU155 LYS156 GLN157 ASP158 ALA159 GLU160 ALA161 GLU162 PRO163 TYR164 ARG165 TYR166 CYS167 VAL168 TRP169 ASP170 GLY171 ARG172 ARG173 GLU174 GLN175 VAL176 ALA177 ASN178 PHE179 ARG180 VAL181 GLU182 PRO183 PRO184 GLY185 LEU186 PHE187 ARG188 GLY189 ARG190 GLY191 LYS192 HIS193 PRO194 LEU195 MET196 GLY197 LYS198 LEU199 LYS200 VAL201 ARG202 VAL203 GLN204 PRO205 GLU206 ASP207 ILE208 THR209 ILE210 ASN211 ILE212 GLY213 GLU214 THR215 ALA216 GLU217 VAL218 PRO219 VAL220 PRO221 PRO222 ALA223 GLY224 HIS225 LYS226 TRP227 ALA228 ALA229 VAL230 GLN231 HIS232 ASP233 HIS234 THR235 VAL236 THR237 TRP238 LEU239 ALA240 MET241 TRP242 ARG243 ASP244 SER245 VAL246 ALA247 GLY248 ASN249 MET250 LYS251 TYR252 VAL253 MET254 LEU255 ALA256 PRO257 SER258 SER259 SER260 VAL261 LYS262 GLY263 GLN264 SER265 ASP266 MET267 VAL268 LYS269 PHE270 GLU271 LYS272 ALA273 ARG274 LYS275 LEU276 LYS277 ASP278 LYS279 VAL280 ASP281 ASP282 ILE283 ARG284 ALA285 SER286 TYR287 MET288 GLU289 ASP290 PHE291 LYS292 SER293 ASN294 ASP295 LEU296 HIS297 VAL298 ALA299 GLN300 ARG301 ALA302 VAL303 ALA304 MET305 TYR306 PHE307 ILE308 ASP309 ARG310 LEU311 ALA312 LEU313 ARG314 VAL315 GLY316 ASN317 GLU318 LYS319 GLY320 GLU321 ASP322 GLU323 ALA324 ASP325 THR326 VAL327 GLY328 CYS329 CYS330 SER331 LEU332 ARG333 VAL334 GLU335 HIS336 ILE337 GLN338 LEU339 MET340 PRO341 ASP342 ASN343 ILE344 VAL345 ARG346 PHE347 ASP348 PHE349 LEU350 GLY351 LYS352 ASP353 SER354 ILE355 ARG356 TYR357 GLN358 ASN359 ASP360 VAL361 ALA362 VAL363 LEU364 PRO365 GLU366 VAL367 TYR368 ALA369 LEU370 LEU371 GLN372 ARG373 PHE374 THR375 ARG376 ARG377 LYS378 SER379 PRO380 GLY381 MET382 ASP383 ILE384 PHE385 ASP386 GLN387 LEU388 ASN389 PRO390 THR391 GLN392 LEU393 ASN394 ASP395 HIS396 LEU397 LYS398 SER399 PHE400 MET401 ASP402 GLY403 LEU404 SER405 ALA406 LYS407 VAL408 PHE409 ARG410 THR411 TYR412 ASN413 ALA414 SER415 ILE416 THR417 LEU418 ASP419 ARG420 TRP421 PHE422 LYS423 GLU424 LYS425 PRO426 TRP431 SER432 THR433 ALA434 ASP435 LYS436 LEU437 ALA438 TYR439 PHE440 ASN441 LYS442 ALA443 ASN444 THR445 GLU446 VAL447 ALA448 ILE449 LEU450 CYS451 ASN452 HIS453 GLN454 LYS455 SER456
Unit 5 LYS211 ALA212 VAL213 SER214 LEU215 GLY216 THR217 SER218 LYS219 ILE220 ASN221 TYR222 ILE223 ASP224 PRO225 ARG226 ILE227 ILE228 CYS229 SER230 TRP231 ALA232 LYS233 ALA234 GLN235 ASP236 VAL237 PRO238 ILE239 ASN240 LYS241 ILE242 PHE243 SER244 ALA245 THR246 ILE247 GLN248 LYS249 LYS250 PHE251 PRO252 TRP253 ALA254 MET255 ASN256 ALA257 GLU258 ASN259 PHE260 ASP261 PHE262

Other macromolecules
Unit 1 DA1 DA2 DA3 DA4 DA5 DG6 DA7 DC8 DT9 DT10
Unit 2 DA11 DG12 DA13 DA14 DA15 DA16 DA17 DT18 DT19 DT20 DT21 DT22
Unit 3 DA101 DA102 DA103 DA104 DA105 DT106 DT107 DT108 DT109 DT110 DC111 DT112 DA113 DA114 DG115 DT116 DC117 DT118 DT119 DT120 DT121 DT122

Ligands
Unit 6 VO4301

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany