2B6B - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYO EM STRUCTURE OF DENGUE COMPLEXED WITH CRD OF DC-SIGN
• Keywords: CRYO EM DENGUE CRD DC-SIGN, ICOSAHEDRAL VIRUS, VIRUS-RECEPTO
• Experiment: ELECTRON MICROSCOPY
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2B6B	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	ENVELOPE GLYCOPROTEIN	A	389	389	0
2	Protein	ENVELOPE GLYCOPROTEIN	B	389	389	0
3	Protein	ENVELOPE GLYCOPROTEIN	C	389	389	0
4	Protein	CD209 ANTIGEN	D	128	128	0
total				1295	1295	0

Proteins

Unit 1	MET 1 ARG 2 CYS 3 ILE 4 GLY 5 ILE 6 SER 7 ASN 8 ARG 9 ASP 10 PHE 11 VAL 12 GLU 13 GLY 14 VAL 15 SER 16 SER 19 TRP 20 VAL 21 ASP 22 ILE 23 VAL 24 LEU 25 GLU 26 HIS 27 GLY 28 SER 29 CYS 30 VAL 31 THR 32 THR 33 MET 34 ALA 35 LYS 36 ASN 37 LYS 38 PRO 39 THR 40 LEU 41 ASP 42 PHE 43 GLU 44 LEU 45 ILE 46 LYS 47 THR 48 GLU 49 ALA 50 LYS 51 GLN 52 PRO 53 ALA 54 THR 55 LEU 56 ARG 57 LYS 58 TYR 59 CYS 60 ILE 61 GLU 62 ALA 63 LYS 64 LEU 65 THR 66 ASN 67 THR 68 THR 69 THR 70 GLU 71 SER 72 ARG 73 CYS 74 PRO 75 THR 76 GLN 77 GLY 78 GLU 79 PRO 80 THR 81 LEU 82 ASN 83 GLU 84 GLU 85 GLN 86 ASP 87 LYS 88 ARG 89 PHE 90 VAL 91 CYS 92 LYS 93 HIS 94 SER 95 MET 96 VAL 97 ASP 98 ARG 99 GLY 100 TRP 101 GLY 102 ASN 103 GLY 104 CYS 105 GLY 106 LEU 107 PHE 108 GLY 109 LYS 110 GLY 111 GLY 112 ILE 113 VAL 114 THR 115 CYS 116 ALA 117 MET 118 PHE 119 THR 120 CYS 121 LYS 122 LYS 123 ASN 124 MET 125 GLU 126 GLY 127 LYS 128 ILE 129 VAL 130 GLN 131 PRO 132 GLU 133 ASN 134 LEU 135 GLU 136 TYR 137 THR 138 VAL 139 VAL 140 ILE 141 THR 142 PRO 143 HIS 144 SER 145 GLY 146 GLU 147 GLU 148 HIS 149 ALA 150 VAL 151 GLY 152 ASN 153 ASP 154 THR 155 GLY 156 LYS 157 HIS 158 GLY 159 LYS 160 GLU 161 VAL 162 LYS 163 ILE 164 THR 165 PRO 166 GLN 167 SER 168 SER 169 ILE 170 THR 171 GLU 172 ALA 173 GLU 174 LEU 175 THR 176 GLY 177 TYR 178 GLY 179 THR 180 VAL 181 THR 182 MET 183 GLU 184 CYS 185 SER 186 PRO 187 ARG 188 THR 189 GLY 190 LEU 191 ASP 192 PHE 193 ASN 194 GLU 195 MET 196 VAL 197 LEU 198 LEU 199 GLN 200 MET 201 LYS 202 ASP 203 LYS 204 ALA 205 TRP 206 LEU 207 VAL 208 HIS 209 ARG 210 GLN 211 TRP 212 PHE 213 LEU 214 ASP 215 LEU 216 PRO 217 LEU 218 PRO 219 TRP 220 LEU 221 PRO 222 GLY 223 ALA 224 GLY 228 SER 229 ASN 230 TRP 231 ILE 232 GLN 233 LYS 234 GLU 235 THR 236 LEU 237 VAL 238 THR 239 PHE 240 LYS 241 ASN 242 PRO 243 HIS 244 ALA 245 LYS 246 LYS 247 GLN 248 ASP 249 VAL 250 VAL 251 VAL 252 LEU 253 GLY 254 SER 255 GLN 256 GLU 257 GLY 258 ALA 259 MET 260 HIS 261 THR 262 ALA 263 LEU 264 THR 265 GLY 266 ALA 267 THR 268 GLU 269 ILE 270 GLN 271 MET 272 SER 273 SER 274 GLY 275 ASN 276 LEU 277 LEU 278 PHE 279 THR 280 GLY 281 HIS 282 LEU 283 LYS 284 CYS 285 ARG 286 LEU 287 ARG 288 MET 289 ASP 290 LYS 291 LEU 292 GLN 293 LEU 294 LYS 295 GLY 296 MET 297 SER 298 TYR 299 SER 300 MET 301 CYS 302 THR 303 GLY 304 LYS 305 PHE 306 LYS 307 VAL 308 VAL 309 LYS 310 GLU 311 ILE 312 ALA 313 GLU 314 THR 315 GLN 316 HIS 317 GLY 318 THR 319 ILE 320 VAL 321 ILE 322 ARG 323 VAL 324 GLN 325 TYR 326 GLU 327 GLY 328 ASP 329 GLY 330 SER 331 PRO 332 CYS 333 LYS 334 ILE 335 PRO 336 PHE 337 GLU 338 ILE 339 MET 340 ASP 341 LEU 342 GLU 343 LYS 344 ARG 345 HIS 346 VAL 347 LEU 348 GLY 349 ARG 350 LEU 351 ILE 352 THR 353 VAL 354 ASN 355 PRO 356 ILE 357 VAL 358 THR 359 GLU 360 LYS 361 ASP 362 SER 363 PRO 364 VAL 365 ASN 366 ILE 367 GLU 368 ALA 369 GLU 370 PRO 371 PRO 372 PHE 373 GLY 374 ASP 375 SER 376 TYR 377 ILE 378 ILE 379 ILE 380 GLY 381 VAL 382 GLU 383 PRO 384 GLY 385 GLN 386 LEU 387 LYS 388 LEU 389 ASN 390 TRP 391 PHE 392 LYS 393 LYS 394
Unit 2	MET 1 ARG 2 CYS 3 ILE 4 GLY 5 ILE 6 SER 7 ASN 8 ARG 9 ASP 10 PHE 11 VAL 12 GLU 13 GLY 14 VAL 15 SER 16 SER 19 TRP 20 VAL 21 ASP 22 ILE 23 VAL 24 LEU 25 GLU 26 HIS 27 GLY 28 SER 29 CYS 30 VAL 31 THR 32 THR 33 MET 34 ALA 35 LYS 36 ASN 37 LYS 38 PRO 39 THR 40 LEU 41 ASP 42 PHE 43 GLU 44 LEU 45 ILE 46 LYS 47 THR 48 GLU 49 ALA 50 LYS 51 GLN 52 PRO 53 ALA 54 THR 55 LEU 56 ARG 57 LYS 58 TYR 59 CYS 60 ILE 61 GLU 62 ALA 63 LYS 64 LEU 65 THR 66 ASN 67 THR 68 THR 69 THR 70 GLU 71 SER 72 ARG 73 CYS 74 PRO 75 THR 76 GLN 77 GLY 78 GLU 79 PRO 80 THR 81 LEU 82 ASN 83 GLU 84 GLU 85 GLN 86 ASP 87 LYS 88 ARG 89 PHE 90 VAL 91 CYS 92 LYS 93 HIS 94 SER 95 MET 96 VAL 97 ASP 98 ARG 99 GLY 100 TRP 101 GLY 102 ASN 103 GLY 104 CYS 105 GLY 106 LEU 107 PHE 108 GLY 109 LYS 110 GLY 111 GLY 112 ILE 113 VAL 114 THR 115 CYS 116 ALA 117 MET 118 PHE 119 THR 120 CYS 121 LYS 122 LYS 123 ASN 124 MET 125 GLU 126 GLY 127 LYS 128 ILE 129 VAL 130 GLN 131 PRO 132 GLU 133 ASN 134 LEU 135 GLU 136 TYR 137 THR 138 VAL 139 VAL 140 ILE 141 THR 142 PRO 143 HIS 144 SER 145 GLY 146 GLU 147 GLU 148 HIS 149 ALA 150 VAL 151 GLY 152 ASN 153 ASP 154 THR 155 GLY 156 LYS 157 HIS 158 GLY 159 LYS 160 GLU 161 VAL 162 LYS 163 ILE 164 THR 165 PRO 166 GLN 167 SER 168 SER 169 ILE 170 THR 171 GLU 172 ALA 173 GLU 174 LEU 175 THR 176 GLY 177 TYR 178 GLY 179 THR 180 VAL 181 THR 182 MET 183 GLU 184 CYS 185 SER 186 PRO 187 ARG 188 THR 189 GLY 190 LEU 191 ASP 192 PHE 193 ASN 194 GLU 195 MET 196 VAL 197 LEU 198 LEU 199 GLN 200 MET 201 LYS 202 ASP 203 LYS 204 ALA 205 TRP 206 LEU 207 VAL 208 HIS 209 ARG 210 GLN 211 TRP 212 PHE 213 LEU 214 ASP 215 LEU 216 PRO 217 LEU 218 PRO 219 TRP 220 LEU 221 PRO 222 GLY 223 ALA 224 GLY 228 SER 229 ASN 230 TRP 231 ILE 232 GLN 233 LYS 234 GLU 235 THR 236 LEU 237 VAL 238 THR 239 PHE 240 LYS 241 ASN 242 PRO 243 HIS 244 ALA 245 LYS 246 LYS 247 GLN 248 ASP 249 VAL 250 VAL 251 VAL 252 LEU 253 GLY 254 SER 255 GLN 256 GLU 257 GLY 258 ALA 259 MET 260 HIS 261 THR 262 ALA 263 LEU 264 THR 265 GLY 266 ALA 267 THR 268 GLU 269 ILE 270 GLN 271 MET 272 SER 273 SER 274 GLY 275 ASN 276 LEU 277 LEU 278 PHE 279 THR 280 GLY 281 HIS 282 LEU 283 LYS 284 CYS 285 ARG 286 LEU 287 ARG 288 MET 289 ASP 290 LYS 291 LEU 292 GLN 293 LEU 294 LYS 295 GLY 296 MET 297 SER 298 TYR 299 SER 300 MET 301 CYS 302 THR 303 GLY 304 LYS 305 PHE 306 LYS 307 VAL 308 VAL 309 LYS 310 GLU 311 ILE 312 ALA 313 GLU 314 THR 315 GLN 316 HIS 317 GLY 318 THR 319 ILE 320 VAL 321 ILE 322 ARG 323 VAL 324 GLN 325 TYR 326 GLU 327 GLY 328 ASP 329 GLY 330 SER 331 PRO 332 CYS 333 LYS 334 ILE 335 PRO 336 PHE 337 GLU 338 ILE 339 MET 340 ASP 341 LEU 342 GLU 343 LYS 344 ARG 345 HIS 346 VAL 347 LEU 348 GLY 349 ARG 350 LEU 351 ILE 352 THR 353 VAL 354 ASN 355 PRO 356 ILE 357 VAL 358 THR 359 GLU 360 LYS 361 ASP 362 SER 363 PRO 364 VAL 365 ASN 366 ILE 367 GLU 368 ALA 369 GLU 370 PRO 371 PRO 372 PHE 373 GLY 374 ASP 375 SER 376 TYR 377 ILE 378 ILE 379 ILE 380 GLY 381 VAL 382 GLU 383 PRO 384 GLY 385 GLN 386 LEU 387 LYS 388 LEU 389 ASN 390 TRP 391 PHE 392 LYS 393 LYS 394
Unit 3	MET 1 ARG 2 CYS 3 ILE 4 GLY 5 ILE 6 SER 7 ASN 8 ARG 9 ASP 10 PHE 11 VAL 12 GLU 13 GLY 14 VAL 15 SER 16 SER 19 TRP 20 VAL 21 ASP 22 ILE 23 VAL 24 LEU 25 GLU 26 HIS 27 GLY 28 SER 29 CYS 30 VAL 31 THR 32 THR 33 MET 34 ALA 35 LYS 36 ASN 37 LYS 38 PRO 39 THR 40 LEU 41 ASP 42 PHE 43 GLU 44 LEU 45 ILE 46 LYS 47 THR 48 GLU 49 ALA 50 LYS 51 GLN 52 PRO 53 ALA 54 THR 55 LEU 56 ARG 57 LYS 58 TYR 59 CYS 60 ILE 61 GLU 62 ALA 63 LYS 64 LEU 65 THR 66 ASN 67 THR 68 THR 69 THR 70 GLU 71 SER 72 ARG 73 CYS 74 PRO 75 THR 76 GLN 77 GLY 78 GLU 79 PRO 80 THR 81 LEU 82 ASN 83 GLU 84 GLU 85 GLN 86 ASP 87 LYS 88 ARG 89 PHE 90 VAL 91 CYS 92 LYS 93 HIS 94 SER 95 MET 96 VAL 97 ASP 98 ARG 99 GLY 100 TRP 101 GLY 102 ASN 103 GLY 104 CYS 105 GLY 106 LEU 107 PHE 108 GLY 109 LYS 110 GLY 111 GLY 112 ILE 113 VAL 114 THR 115 CYS 116 ALA 117 MET 118 PHE 119 THR 120 CYS 121 LYS 122 LYS 123 ASN 124 MET 125 GLU 126 GLY 127 LYS 128 ILE 129 VAL 130 GLN 131 PRO 132 GLU 133 ASN 134 LEU 135 GLU 136 TYR 137 THR 138 VAL 139 VAL 140 ILE 141 THR 142 PRO 143 HIS 144 SER 145 GLY 146 GLU 147 GLU 148 HIS 149 ALA 150 VAL 151 GLY 152 ASN 153 ASP 154 THR 155 GLY 156 LYS 157 HIS 158 GLY 159 LYS 160 GLU 161 VAL 162 LYS 163 ILE 164 THR 165 PRO 166 GLN 167 SER 168 SER 169 ILE 170 THR 171 GLU 172 ALA 173 GLU 174 LEU 175 THR 176 GLY 177 TYR 178 GLY 179 THR 180 VAL 181 THR 182 MET 183 GLU 184 CYS 185 SER 186 PRO 187 ARG 188 THR 189 GLY 190 LEU 191 ASP 192 PHE 193 ASN 194 GLU 195 MET 196 VAL 197 LEU 198 LEU 199 GLN 200 MET 201 LYS 202 ASP 203 LYS 204 ALA 205 TRP 206 LEU 207 VAL 208 HIS 209 ARG 210 GLN 211 TRP 212 PHE 213 LEU 214 ASP 215 LEU 216 PRO 217 LEU 218 PRO 219 TRP 220 LEU 221 PRO 222 GLY 223 ALA 224 GLY 228 SER 229 ASN 230 TRP 231 ILE 232 GLN 233 LYS 234 GLU 235 THR 236 LEU 237 VAL 238 THR 239 PHE 240 LYS 241 ASN 242 PRO 243 HIS 244 ALA 245 LYS 246 LYS 247 GLN 248 ASP 249 VAL 250 VAL 251 VAL 252 LEU 253 GLY 254 SER 255 GLN 256 GLU 257 GLY 258 ALA 259 MET 260 HIS 261 THR 262 ALA 263 LEU 264 THR 265 GLY 266 ALA 267 THR 268 GLU 269 ILE 270 GLN 271 MET 272 SER 273 SER 274 GLY 275 ASN 276 LEU 277 LEU 278 PHE 279 THR 280 GLY 281 HIS 282 LEU 283 LYS 284 CYS 285 ARG 286 LEU 287 ARG 288 MET 289 ASP 290 LYS 291 LEU 292 GLN 293 LEU 294 LYS 295 GLY 296 MET 297 SER 298 TYR 299 SER 300 MET 301 CYS 302 THR 303 GLY 304 LYS 305 PHE 306 LYS 307 VAL 308 VAL 309 LYS 310 GLU 311 ILE 312 ALA 313 GLU 314 THR 315 GLN 316 HIS 317 GLY 318 THR 319 ILE 320 VAL 321 ILE 322 ARG 323 VAL 324 GLN 325 TYR 326 GLU 327 GLY 328 ASP 329 GLY 330 SER 331 PRO 332 CYS 333 LYS 334 ILE 335 PRO 336 PHE 337 GLU 338 ILE 339 MET 340 ASP 341 LEU 342 GLU 343 LYS 344 ARG 345 HIS 346 VAL 347 LEU 348 GLY 349 ARG 350 LEU 351 ILE 352 THR 353 VAL 354 ASN 355 PRO 356 ILE 357 VAL 358 THR 359 GLU 360 LYS 361 ASP 362 SER 363 PRO 364 VAL 365 ASN 366 ILE 367 GLU 368 ALA 369 GLU 370 PRO 371 PRO 372 PHE 373 GLY 374 ASP 375 SER 376 TYR 377 ILE 378 ILE 379 ILE 380 GLY 381 VAL 382 GLU 383 PRO 384 GLY 385 GLN 386 LEU 387 LYS 388 LEU 389 ASN 390 TRP 391 PHE 392 LYS 393 LYS 394
Unit 4	PRO 255 CYS 256 PRO 257 TRP 258 GLU 259 TRP 260 THR 261 PHE 262 PHE 263 GLN 264 GLY 265 ASN 266 CYS 267 TYR 268 PHE 269 MET 270 SER 271 ASN 272 SER 273 GLN 274 ARG 275 ASN 276 TRP 277 HIS 278 ASP 279 SER 280 ILE 281 THR 282 ALA 283 CYS 284 LYS 285 GLU 286 VAL 287 GLY 288 ALA 289 GLN 290 LEU 291 VAL 292 VAL 293 ILE 294 LYS 295 SER 296 ALA 297 GLU 298 GLU 299 GLN 300 ASN 301 PHE 302 LEU 303 GLN 304 LEU 305 GLN 306 SER 307 SER 308 ARG 309 SER 310 ASN 311 ARG 312 PHE 313 THR 314 TRP 315 MET 316 GLY 317 LEU 318 SER 319 ASP 320 LEU 321 ASN 322 GLN 323 GLU 324 GLY 325 THR 326 TRP 327 GLN 328 TRP 329 VAL 330 ASP 331 GLY 332 SER 333 PRO 334 LEU 335 LEU 336 PRO 337 SER 338 PHE 339 LYS 340 GLN 341 TYR 342 TRP 343 ASN 344 ARG 345 GLY 346 GLU 347 PRO 348 ASN 349 ASN 350 VAL 351 GLY 352 GLU 353 GLU 354 ASP 355 CYS 356 ALA 357 GLU 358 PHE 359 SER 360 GLY 361 ASN 362 GLY 363 TRP 364 ASN 365 ASP 366 ASP 367 LYS 368 CYS 369 ASN 370 LEU 371 ALA 372 LYS 373 PHE 374 TRP 375 ILE 376 CYS 377 LYS 378 LYS 379 SER 380 ALA 381 ALA 382