2B3J - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS TRNA ADENOSINE DE TADA, IN COMPLEX WITH RNA
• Keywords: MIXED ALPHA-BETA, PROTEIN-RNA COMPLEX, RNA STEM-LOOP, HYDROL COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2B3J	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	RNA		E	15	294	21
2	RNA		F	15	294	21
3	RNA		G	8	148	21
4	RNA		H	16	314	21
5	Protein	TRNA ADENOSINE DEAMINASE	A	151	1137	0
6	Protein	TRNA ADENOSINE DEAMINASE	B	151	1132	0
7	Protein	TRNA ADENOSINE DEAMINASE	C	152	1140	0
8	Protein	TRNA ADENOSINE DEAMINASE	D	150	1120	0
9	Ligand	TRNA ADENOSINE DEAMINASE	A	2	0	7
10	Ligand	TRNA ADENOSINE DEAMINASE	B	2	0	7
11	Ligand	TRNA ADENOSINE DEAMINASE	C	2	0	7
12	Ligand	TRNA ADENOSINE DEAMINASE	D	2	0	7
13	Water			300	0	300
total				966	5579	412

Proteins

Unit 5	MET 1 THR 2 ASN 3 ASP 4 ILE 5 TYR 6 PHE 7 MET 8 THR 9 LEU 10 ALA 11 ILE 12 GLU 13 GLU 14 ALA 15 LYS 16 LYS 17 ALA 18 ALA 19 GLN 20 LEU 21 GLY 22 GLU 23 VAL 24 PRO 25 ILE 26 GLY 27 ALA 28 ILE 29 ILE 30 THR 31 LYS 32 ASP 33 ASP 34 GLU 35 VAL 36 ILE 37 ALA 38 ARG 39 ALA 40 HIS 41 ASN 42 LEU 43 ARG 44 GLU 45 THR 46 LEU 47 GLN 48 GLN 49 PRO 50 THR 51 ALA 52 HIS 53 ALA 54 GLU 55 HIS 56 ILE 57 ALA 58 ILE 59 GLU 60 ARG 61 ALA 62 ALA 63 LYS 64 VAL 65 LEU 66 GLY 67 SER 68 TRP 69 ARG 70 LEU 71 GLU 72 GLY 73 CYS 74 THR 75 LEU 76 TYR 77 VAL 78 THR 79 LEU 80 GLU 81 PRO 82 CYS 83 VAL 84 MET 85 CYS 86 ALA 87 GLY 88 THR 89 ILE 90 VAL 91 MET 92 SER 93 ARG 94 ILE 95 PRO 96 ARG 97 VAL 98 VAL 99 TYR 100 GLY 101 ALA 102 ASP 103 ASP 104 PRO 105 LYS 106 GLY 107 GLY 108 CYS 109 SER 110 GLY 111 SER 112 LEU 113 MET 114 ASN 115 LEU 116 LEU 117 GLN 118 GLN 119 SER 120 ASN 121 PHE 122 ASN 123 HIS 124 ARG 125 ALA 126 ILE 127 VAL 128 ASP 129 LYS 130 GLY 131 VAL 132 LEU 133 LYS 134 GLU 135 ALA 136 CYS 137 SER 138 THR 139 LEU 140 LEU 141 THR 142 THR 143 PHE 144 PHE 145 LYS 146 ASN 147 LEU 148 ARG 149 ALA 150 ASN 151
Unit 6	MET 1 THR 2 ASN 3 ASP 4 ILE 5 TYR 6 PHE 7 MET 8 THR 9 LEU 10 ALA 11 ILE 12 GLU 13 GLU 14 ALA 15 LYS 16 LYS 17 ALA 18 ALA 19 GLN 20 LEU 21 GLY 22 GLU 23 VAL 24 PRO 25 ILE 26 GLY 27 ALA 28 ILE 29 ILE 30 THR 31 LYS 32 ASP 33 ASP 34 GLU 35 VAL 36 ILE 37 ALA 38 ARG 39 ALA 40 HIS 41 ASN 42 LEU 43 ARG 44 GLU 45 THR 46 LEU 47 GLN 48 GLN 49 PRO 50 THR 51 ALA 52 HIS 53 ALA 54 GLU 55 HIS 56 ILE 57 ALA 58 ILE 59 GLU 60 ARG 61 ALA 62 ALA 63 LYS 64 VAL 65 LEU 66 GLY 67 SER 68 TRP 69 ARG 70 LEU 71 GLU 72 GLY 73 CYS 74 THR 75 LEU 76 TYR 77 VAL 78 THR 79 LEU 80 GLU 81 PRO 82 CYS 83 VAL 84 MET 85 CYS 86 ALA 87 GLY 88 THR 89 ILE 90 VAL 91 MET 92 SER 93 ARG 94 ILE 95 PRO 96 ARG 97 VAL 98 VAL 99 TYR 100 GLY 101 ALA 102 ASP 103 ASP 104 PRO 105 LYS 106 GLY 107 GLY 108 CYS 109 SER 110 GLY 111 SER 112 LEU 113 MET 114 ASN 115 LEU 116 LEU 117 GLN 118 GLN 119 SER 120 ASN 121 PHE 122 ASN 123 HIS 124 ARG 125 ALA 126 ILE 127 VAL 128 ASP 129 LYS 130 GLY 131 VAL 132 LEU 133 LYS 134 GLU 135 ALA 136 CYS 137 SER 138 THR 139 LEU 140 LEU 141 THR 142 THR 143 PHE 144 PHE 145 LYS 146 ASN 147 LEU 148 ARG 149 ALA 150 ASN 151
Unit 7	MET 1 THR 2 ASN 3 ASP 4 ILE 5 TYR 6 PHE 7 MET 8 THR 9 LEU 10 ALA 11 ILE 12 GLU 13 GLU 14 ALA 15 LYS 16 LYS 17 ALA 18 ALA 19 GLN 20 LEU 21 GLY 22 GLU 23 VAL 24 PRO 25 ILE 26 GLY 27 ALA 28 ILE 29 ILE 30 THR 31 LYS 32 ASP 33 ASP 34 GLU 35 VAL 36 ILE 37 ALA 38 ARG 39 ALA 40 HIS 41 ASN 42 LEU 43 ARG 44 GLU 45 THR 46 LEU 47 GLN 48 GLN 49 PRO 50 THR 51 ALA 52 HIS 53 ALA 54 GLU 55 HIS 56 ILE 57 ALA 58 ILE 59 GLU 60 ARG 61 ALA 62 ALA 63 LYS 64 VAL 65 LEU 66 GLY 67 SER 68 TRP 69 ARG 70 LEU 71 GLU 72 GLY 73 CYS 74 THR 75 LEU 76 TYR 77 VAL 78 THR 79 LEU 80 GLU 81 PRO 82 CYS 83 VAL 84 MET 85 CYS 86 ALA 87 GLY 88 THR 89 ILE 90 VAL 91 MET 92 SER 93 ARG 94 ILE 95 PRO 96 ARG 97 VAL 98 VAL 99 TYR 100 GLY 101 ALA 102 ASP 103 ASP 104 PRO 105 LYS 106 GLY 107 GLY 108 CYS 109 SER 110 GLY 111 SER 112 LEU 113 MET 114 ASN 115 LEU 116 LEU 117 GLN 118 GLN 119 SER 120 ASN 121 PHE 122 ASN 123 HIS 124 ARG 125 ALA 126 ILE 127 VAL 128 ASP 129 LYS 130 GLY 131 VAL 132 LEU 133 LYS 134 GLU 135 ALA 136 CYS 137 SER 138 THR 139 LEU 140 LEU 141 THR 142 THR 143 PHE 144 PHE 145 LYS 146 ASN 147 LEU 148 ARG 149 ALA 150 ASN 151 LYS 152
Unit 8	ASN 3 ASP 4 ILE 5 TYR 6 PHE 7 MET 8 THR 9 LEU 10 ALA 11 ILE 12 GLU 13 GLU 14 ALA 15 LYS 16 LYS 17 ALA 18 ALA 19 GLN 20 LEU 21 GLY 22 GLU 23 VAL 24 PRO 25 ILE 26 GLY 27 ALA 28 ILE 29 ILE 30 THR 31 LYS 32 ASP 33 ASP 34 GLU 35 VAL 36 ILE 37 ALA 38 ARG 39 ALA 40 HIS 41 ASN 42 LEU 43 ARG 44 GLU 45 THR 46 LEU 47 GLN 48 GLN 49 PRO 50 THR 51 ALA 52 HIS 53 ALA 54 GLU 55 HIS 56 ILE 57 ALA 58 ILE 59 GLU 60 ARG 61 ALA 62 ALA 63 LYS 64 VAL 65 LEU 66 GLY 67 SER 68 TRP 69 ARG 70 LEU 71 GLU 72 GLY 73 CYS 74 THR 75 LEU 76 TYR 77 VAL 78 THR 79 LEU 80 GLU 81 PRO 82 CYS 83 VAL 84 MET 85 CYS 86 ALA 87 GLY 88 THR 89 ILE 90 VAL 91 MET 92 SER 93 ARG 94 ILE 95 PRO 96 ARG 97 VAL 98 VAL 99 TYR 100 GLY 101 ALA 102 ASP 103 ASP 104 PRO 105 LYS 106 GLY 107 GLY 108 CYS 109 SER 110 GLY 111 SER 112 LEU 113 MET 114 ASN 115 LEU 116 LEU 117 GLN 118 GLN 119 SER 120 ASN 121 PHE 122 ASN 123 HIS 124 ARG 125 ALA 126 ILE 127 VAL 128 ASP 129 LYS 130 GLY 131 VAL 132 LEU 133 LYS 134 GLU 135 ALA 136 CYS 137 SER 138 THR 139 LEU 140 LEU 141 THR 142 THR 143 PHE 144 PHE 145 LYS 146 ASN 147 LEU 148 ARG 149 ALA 150 ASN 151 LYS 152

Nucleic acids

Unit 1	U 28 U 29 G 30 A 31 C 32 U 33 P5P 34 C 35 G 36 G 37 A 38 U 39 C 40 A 41 A 42
Unit 2	U 28 U 29 G 30 A 31 C 32 U 33 P5P 34 C 35 G 36 G 37 A 38 U 39 C 40 A 41 A 42
Unit 3	G 30 A 31 C 32 U 33 P5P 34 C 35 G 36 G 37
Unit 4	U 27 U 28 U 29 G 30 A 31 C 32 U 33 P5P 34 C 35 G 36 G 37 A 38 U 39 C 40 A 41 A 42

Ligands

Unit 9	GOL 1001 ZN 2001
Unit 10	GOL 1002 ZN 2002
Unit 11	GOL 1004 ZN 2003
Unit 12	GOL 1003 ZN 2004