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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE (II) OF NOVA-1 KH1/KH2 DOMAIN TANDEM WITH HAIRPIN
Keywords PROTEIN-RNA COMPLEX, KH DOMAIN, HAIRPIN, RNA-BINDING PROTEIN COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2ANR     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    B 25 510 21
2  Protein   NEURO-ONCOLOGICAL VENTRAL ANTIGEN 1  A 155 1161 16
3  Ligand   5'-R(*CP*(5BU) P*CP*GP*CP*GP*GP*AP*UP*CP*AP*GP*UP*CP*AP*CP*CP*CP*AP*AP*GP* )-3'  B 3 0 3
4 Water     106 0 106
total       289 1671 146

Proteins
Unit 2 GLY3 SER4 GLN5 TYR6 PHE7 LEU8 LYS9 VAL10 LEU11 ILE12 PRO13 SER14 TYR15 ALA16 ALA17 GLY18 SER19 ILE20 ILE21 GLY22 LYS23 GLY24 GLY25 GLN26 THR27 ILE28 VAL29 GLN30 LEU31 GLN32 LYS33 GLU34 THR35 GLY36 ALA37 THR38 ILE39 LYS40 LEU41 SER42 LYS43 SER44 LYS45 ASP46 PHE47 TYR48 PRO49 GLY50 THR51 THR52 GLU53 ARG54 VAL55 CYS56 LEU57 ILE58 GLN59 GLY60 THR61 ILE62 GLU63 ALA64 LEU65 ASN66 ALA67 VAL68 HIS69 GLY70 PHE71 ILE72 ALA73 GLU74 LYS75 ILE76 ARG77 GLU78 MSE79 PRO80 GLN81 ASN82 PRO100 ASP101 ARG102 ALA103 ASN104 GLN105 VAL106 LYS107 ILE108 ILE109 VAL110 PRO111 ASN112 SER113 THR114 ALA115 GLY116 LEU117 ILE118 ILE119 GLY120 LYS121 GLY122 GLY123 ALA124 THR125 VAL126 LYS127 ALA128 ILE129 MSE130 GLU131 GLN132 SER133 GLY134 ALA135 TRP136 VAL137 GLN138 LEU139 SER140 GLN141 LYS142 PRO143 LEU148 GLN149 ASN150 ARG151 VAL152 VAL153 THR154 VAL155 SER156 GLY157 GLU158 PRO159 GLU160 GLN161 ASN162 ARG163 LYS164 ALA165 VAL166 GLU167 LEU168 ILE169 ILE170 GLN171 LYS172 ILE173 GLN174 GLU175 ASP176 PRO177 GLN178

Nucleic acids
Unit 1 C201 5BU202 C203 G204 C205 G206 G207 A208 U209 C210 A211 G212 U213 C214 A215 C216 C217 C218 A219 A220 G221 C222 G223 A224 G225

Ligands
Unit 3 K301 MG302 MG306

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany