2AGS - Sequence, Chains, Asymmetric and Biological Units

• Title: TRYPANOSOMA RANGELI SIALIDASE IN COMPLEX WITH 2-KETO-3-DEOXY GLYCERO-D-GALACTO-2,3-DIFLUORO-NONONIC ACID (2,3-DIFLUORO-K
• Keywords: BETA-PROPELLER, COVALENT ENZYME-INTERMEDIATE COMPLEX, BETA-S HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2AGS	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	SIALIDASE	A	634	4881	0
2	Ligand	SIALIDASE	A	3	0	28
3	Water			805	0	805
total				1442	4881	833

Proteins

Unit 1

MET -2 ALA -1 SER 0 LEU 1 ALA 2 PRO 3 GLY 4 SER 5 SER 6 ARG 7 VAL 8 GLU 9 LEU 10 PHE 11 LYS 12 ARG 13 LYS 14 ASN 15 SER 16 THR 17 VAL 18 PRO 19 PHE 20 GLU 21 GLU 22 SER 23 ASN 24 GLY 25 THR 26 ILE 27 ARG 28 GLU 29 ARG 30 VAL 31 VAL 32 HIS 33 SER 34 PHE 35 ARG 36 ILE 37 PRO 38 THR 39 ILE 40 VAL 41 ASN 42 VAL 43 ASP 44 GLY 45 VAL 46 MET 47 VAL 48 ALA 49 ILE 50 ALA 51 ASP 52 ALA 53 ARG 54 TYR 55 GLU 56 THR 57 SER 58 PHE 59 ASP 60 ASN 61 SER 62 PHE 63 ILE 64 GLU 65 THR 66 ALA 67 VAL 68 LYS 69 TYR 70 SER 71 VAL 72 ASP 73 ASP 74 GLY 75 ALA 76 THR 77 TRP 78 ASN 79 THR 80 GLN 81 ILE 82 ALA 83 ILE 84 LYS 85 ASN 86 SER 87 ARG 88 ALA 89 SER 90 SER 91 VAL 92 SER 93 ARG 94 VAL 95 MET 96 ASP 97 ALA 98 THR 99 VAL 100 ILE 101 VAL 102 LYS 103 GLY 104 ASN 105 LYS 106 LEU 107 TYR 108 ILE 109 LEU 110 VAL 111 GLY 112 SER 113 PHE 114 ASN 115 LYS 116 THR 117 ARG 118 ASN 119 SER 120 TRP 121 THR 122 GLN 123 HIS 124 ARG 125 ASP 126 GLY 127 SER 128 ASP 129 TRP 130 GLU 131 PRO 132 LEU 133 LEU 134 VAL 135 VAL 136 GLY 137 GLU 138 VAL 139 THR 140 LYS 141 SER 142 ALA 143 ALA 144 ASN 145 GLY 146 LYS 147 THR 148 THR 149 ALA 150 THR 151 ILE 152 SER 153 TRP 154 GLY 155 LYS 156 PRO 157 VAL 158 SER 159 LEU 160 LYS 161 PRO 162 LEU 163 PHE 164 PRO 165 ALA 166 GLU 167 PHE 168 ASP 169 GLY 170 ILE 171 LEU 172 THR 173 LYS 174 GLU 175 PHE 176 ILE 177 GLY 178 GLY 179 VAL 180 GLY 181 ALA 182 ALA 183 ILE 184 VAL 185 ALA 186 SER 187 ASN 188 GLY 189 ASN 190 LEU 191 VAL 192 TYR 193 PRO 194 VAL 195 GLN 196 ILE 197 ALA 198 ASP 199 MET 200 GLY 201 GLY 202 ARG 203 VAL 204 PHE 205 THR 206 LYS 207 ILE 208 MET 209 TYR 210 SER 211 GLU 212 ASP 213 ASP 214 GLY 215 ASN 216 THR 217 TRP 218 LYS 219 PHE 220 ALA 221 GLU 222 GLY 223 ARG 224 SER 225 LYS 226 PHE 227 GLY 228 CYS 229 SER 230 GLU 231 PRO 232 ALA 233 VAL 234 LEU 235 GLU 236 TRP 237 GLU 238 GLY 239 LYS 240 LEU 241 ILE 242 ILE 243 ASN 244 ASN 245 ARG 246 VAL 247 ASP 248 GLY 249 ASN 250 ARG 251 ARG 252 LEU 253 VAL 254 TYR 255 GLU 256 SER 257 SER 258 ASP 259 MET 260 GLY 261 LYS 262 THR 263 TRP 264 VAL 265 GLU 266 ALA 267 LEU 268 GLY 269 THR 270 LEU 271 SER 272 HIS 273 VAL 274 TRP 275 THR 276 ASN 277 SER 278 PRO 279 THR 280 SER 281 ASN 282 GLN 283 GLN 284 ASP 285 CYS 286 GLN 287 SER 288 SER 289 PHE 290 VAL 291 ALA 292 VAL 293 THR 294 ILE 295 GLU 296 GLY 297 LYS 298 ARG 299 VAL 300 MET 301 LEU 302 PHE 303 THR 304 HIS 305 PRO 306 LEU 307 ASN 308 LEU 309 LYS 310 GLY 311 ARG 312 TRP 313 MET 314 ARG 315 ASP 316 ARG 317 LEU 318 HIS 319 LEU 320 TRP 321 MET 322 THR 323 ASP 324 ASN 325 GLN 326 ARG 327 ILE 328 PHE 329 ASP 330 VAL 331 GLY 332 GLN 333 ILE 334 SER 335 ILE 336 GLY 337 ASP 338 GLU 339 ASN 340 SER 341 GLY 342 TYR 343 SER 344 SER 345 VAL 346 LEU 347 TYR 348 LYS 349 ASP 350 ASP 351 LYS 352 LEU 353 TYR 354 SER 355 LEU 356 HIS 357 GLU 358 ILE 359 ASN 360 THR 361 ASN 362 ASP 363 VAL 364 TYR 365 SER 366 LEU 367 VAL 368 PHE 369 VAL 370 ARG 371 LEU 372 ILE 373 GLY 374 GLU 375 LEU 376 GLN 377 LEU 378 MET 379 LYS 380 SER 381 VAL 382 VAL 383 ARG 384 THR 385 TRP 386 LYS 387 GLU 388 GLU 389 ASP 390 ASN 391 HIS 392 LEU 393 ALA 394 SER 395 ILE 396 CYS 397 THR 398 PRO 399 VAL 400 VAL 401 PRO 402 ALA 403 THR 404 PRO 405 PRO 406 SER 407 LYS 408 GLY 409 GLY 410 CYS 411 GLY 412 ALA 413 ALA 414 VAL 415 PRO 416 THR 417 ALA 418 GLY 419 LEU 420 VAL 421 GLY 422 PHE 423 LEU 424 SER 425 HIS 426 SER 427 ALA 428 ASN 429 GLY 430 SER 431 VAL 432 TRP 433 GLU 434 ASP 435 VAL 436 TYR 437 ARG 438 CYS 439 VAL 440 ASP 441 ALA 442 ASN 443 VAL 444 ALA 445 ASN 446 ALA 447 GLU 448 ARG 449 VAL 450 PRO 451 ASN 452 GLY 453 LEU 454 LYS 455 PHE 456 ASN 457 GLY 458 VAL 459 GLY 460 GLY 461 GLY 462 ALA 463 VAL 464 TRP 465 PRO 466 VAL 467 ALA 468 ARG 469 GLN 470 GLY 471 GLN 472 THR 473 ARG 474 ARG 475 TYR 476 GLN 477 PHE 478 ALA 479 ASN 480 TYR 481 ARG 482 PHE 483 THR 484 LEU 485 VAL 486 ALA 487 THR 488 VAL 489 THR 490 ILE 491 ASP 492 GLU 493 LEU 494 PRO 495 LYS 496 GLY 497 THR 498 SER 499 PRO 500 LEU 501 LEU 502 GLY 503 ALA 504 GLY 505 LEU 506 GLU 507 GLY 508 PRO 509 GLY 510 ASP 511 ALA 512 LYS 513 LEU 514 LEU 515 GLY 516 LEU 517 SER 518 TYR 519 ASP 520 LYS 521 ASN 522 ARG 523 GLN 524 TRP 525 ARG 526 PRO 527 LEU 528 TYR 529 GLY 530 ALA 531 ALA 532 PRO 533 ALA 534 SER 535 PRO 536 THR 537 GLY 538 SER 539 TRP 540 GLU 541 LEU 542 HIS 543 LYS 544 LYS 545 TYR 546 HIS 547 VAL 548 VAL 549 LEU 550 THR 551 MET 552 ALA 553 ASP 554 ARG 555 GLN 556 GLY 557 SER 558 VAL 559 TYR 560 VAL 561 ASP 562 GLY 563 GLN 564 PRO 565 LEU 566 ALA 567 GLY 568 SER 569 GLY 570 ASN 571 THR 572 VAL 573 VAL 574 ARG 575 GLY 576 ALA 577 THR 578 LEU 579 PRO 580 ASP 581 ILE 582 SER 583 HIS 584 PHE 585 TYR 586 ILE 587 GLY 588 GLY 589 PRO 590 ARG 591 SER 592 LYS 593 GLY 594 ALA 595 PRO 596 THR 597 ASP 598 SER 599 ARG 600 VAL 601 THR 602 VAL 603 THR 604 ASN 605 VAL 606 VAL 607 LEU 608 TYR 609 ASN 610 ARG 611 ARG 612 LEU 613 ASN 614 SER 615 SER 616 GLU 617 ILE 618 ARG 619 THR 620 LEU 621 PHE 622 LEU 623 SER 624 GLN 625 ASP 626 MET 627 ILE 628 GLY 629 THR 630 ASP 631

Ligands

Unit 2

FKD 700 SO4 901 SO4 902