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Sequence, Chains, Asymmetric and Biological Units

Title COMPLEX II (SUCCINATE DEHYDROGENASE) FROM E. COLI WITH ATPEN INHIBITOR CO-CRYSTALLIZED AT THE UBIQUINONE BINDING SITE
Keywords MEMBRANE PROTEIN, AEROBIC REPARATORY COMPLEX II, SQR, SUCCINATE:UBIQUINONE OXIDOREDUCTASE, AA5, AT5, ATPENIN A5, SUCCINATE DEHYDROGENASE, OXIDOREDUCTASE-ELECTRON TRANSPORT
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2ACZ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT  A 588 4522 0
2  Protein   SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN  B 238 1869 0
3  Protein   SUCCINATE DEHYDROGENASE CYTOCHROME B556 SUBUNIT  C 129 1008 0
4  Protein   SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCH PROTEIN  D 113 898 0
5  Ligand   SUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT  A 2 0 62
6  Ligand   SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN  B 3 0 19
7  Ligand   SUCCINATE DEHYDROGENASE CYTOCHROME B556 SUBUNIT  C 3 0 143
total       1076 8297 224

Proteins
Unit 1 MET1 LYS2 LEU3 PRO4 VAL5 ARG6 GLU7 PHE8 ASP9 ALA10 VAL11 VAL12 ILE13 GLY14 ALA15 GLY16 GLY17 ALA18 GLY19 MET20 ARG21 ALA22 ALA23 LEU24 GLN25 ILE26 SER27 GLN28 SER29 GLY30 GLN31 THR32 CYS33 ALA34 LEU35 LEU36 SER37 LYS38 VAL39 PHE40 PRO41 THR42 ARG43 SER44 HIS45 THR46 VAL47 SER48 ALA49 GLN50 GLY51 GLY52 ILE53 THR54 VAL55 ALA56 LEU57 GLY58 ASN59 THR60 HIS61 GLU62 ASP63 ASN64 TRP65 GLU66 TRP67 HIS68 MET69 TYR70 ASP71 THR72 VAL73 LYS74 GLY75 SER76 ASP77 TYR78 ILE79 GLY80 ASP81 GLN82 ASP83 ALA84 ILE85 GLU86 TYR87 MET88 CYS89 LYS90 THR91 GLY92 PRO93 GLU94 ALA95 ILE96 LEU97 GLU98 LEU99 GLU100 HIS101 MET102 GLY103 LEU104 PRO105 PHE106 SER107 ARG108 LEU109 ASP110 ASP111 GLY112 ARG113 ILE114 TYR115 GLN116 ARG117 PRO118 PHE119 GLY120 GLY121 GLN122 SER123 LYS124 ASN125 PHE126 GLY127 GLY128 GLU129 GLN130 ALA131 ALA132 ARG133 THR134 ALA135 ALA136 ALA137 ALA138 ASP139 ARG140 THR141 GLY142 HIS143 ALA144 LEU145 LEU146 HIS147 THR148 LEU149 TYR150 GLN151 GLN152 ASN153 LEU154 LYS155 ASN156 HIS157 THR158 THR159 ILE160 PHE161 SER162 GLU163 TRP164 TYR165 ALA166 LEU167 ASP168 LEU169 VAL170 LYS171 ASN172 GLN173 ASP174 GLY175 ALA176 VAL177 VAL178 GLY179 CYS180 THR181 ALA182 LEU183 CYS184 ILE185 GLU186 THR187 GLY188 GLU189 VAL190 VAL191 TYR192 PHE193 LYS194 ALA195 ARG196 ALA197 THR198 VAL199 LEU200 ALA201 THR202 GLY203 GLY204 ALA205 GLY206 ARG207 ILE208 TYR209 GLN210 SER211 THR212 THR213 ASN214 ALA215 HIS216 ILE217 ASN218 THR219 GLY220 ASP221 GLY222 VAL223 GLY224 MET225 ALA226 ILE227 ARG228 ALA229 GLY230 VAL231 PRO232 VAL233 GLN234 ASP235 MET236 GLU237 MET238 TRP239 GLN240 PHE241 HIS242 PRO243 THR244 GLY245 ILE246 ALA247 GLY248 ALA249 GLY250 VAL251 LEU252 VAL253 THR254 GLU255 GLY256 CYS257 ARG258 GLY259 GLU260 GLY261 GLY262 TYR263 LEU264 LEU265 ASN266 LYS267 HIS268 GLY269 GLU270 ARG271 PHE272 MET273 GLU274 ARG275 TYR276 ALA277 PRO278 ASN279 ALA280 LYS281 ASP282 LEU283 ALA284 GLY285 ARG286 ASP287 VAL288 VAL289 ALA290 ARG291 SER292 ILE293 MET294 ILE295 GLU296 ILE297 ARG298 GLU299 GLY300 ARG301 GLY302 CYS303 ASP304 GLY305 PRO306 TRP307 GLY308 PRO309 HIS310 ALA311 LYS312 LEU313 LYS314 LEU315 ASP316 HIS317 LEU318 GLY319 LYS320 GLU321 VAL322 LEU323 GLU324 SER325 ARG326 LEU327 PRO328 GLY329 ILE330 LEU331 GLU332 LEU333 SER334 ARG335 THR336 PHE337 ALA338 HIS339 VAL340 ASP341 PRO342 VAL343 LYS344 GLU345 PRO346 ILE347 PRO348 VAL349 ILE350 PRO351 THR352 CYS353 HIS354 TYR355 MET356 MET357 GLY358 GLY359 ILE360 PRO361 THR362 LYS363 VAL364 THR365 GLY366 GLN367 ALA368 LEU369 THR370 VAL371 ASN372 GLU373 LYS374 GLY375 GLU376 ASP377 VAL378 VAL379 VAL380 PRO381 GLY382 LEU383 PHE384 ALA385 VAL386 GLY387 GLU388 ILE389 ALA390 CYS391 VAL392 SER393 VAL394 HIS395 GLY396 ALA397 ASN398 ARG399 LEU400 GLY401 GLY402 ASN403 SER404 LEU405 LEU406 ASP407 LEU408 VAL409 VAL410 PHE411 GLY412 ARG413 ALA414 ALA415 GLY416 LEU417 HIS418 LEU419 GLN420 GLU421 SER422 ILE423 ALA424 GLU425 GLN426 GLY427 ALA428 LEU429 ARG430 ASP431 ALA432 SER433 GLU434 SER435 ASP436 VAL437 GLU438 ALA439 SER440 LEU441 ASP442 ARG443 LEU444 ASN445 ARG446 TRP447 ASN448 ASN449 ASN450 ARG451 ASN452 GLY453 GLU454 ASP455 PRO456 VAL457 ALA458 ILE459 ARG460 LYS461 ALA462 LEU463 GLN464 GLU465 CYS466 MET467 GLN468 HIS469 ASN470 PHE471 SER472 VAL473 PHE474 ARG475 GLU476 GLY477 ASP478 ALA479 MET480 ALA481 LYS482 GLY483 LEU484 GLU485 GLN486 LEU487 LYS488 VAL489 ILE490 ARG491 GLU492 ARG493 LEU494 LYS495 ASN496 ALA497 ARG498 LEU499 ASP500 ASP501 THR502 SER503 SER504 GLU505 PHE506 ASN507 THR508 GLN509 ARG510 VAL511 GLU512 CYS513 LEU514 GLU515 LEU516 ASP517 ASN518 LEU519 MET520 GLU521 THR522 ALA523 TYR524 ALA525 THR526 ALA527 VAL528 SER529 ALA530 ASN531 PHE532 ARG533 THR534 GLU535 SER536 ARG537 GLY538 ALA539 HIS540 SER541 ARG542 PHE543 ASP544 PHE545 PRO546 ASP547 ARG548 ASP549 ASP550 GLU551 ASN552 TRP553 LEU554 CYS555 HIS556 SER557 LEU558 TYR559 LEU560 PRO561 GLU562 SER563 GLU564 SER565 MET566 THR567 ARG568 ARG569 SER570 VAL571 ASN572 MET573 GLU574 PRO575 LYS576 LEU577 ARG578 PRO579 ALA580 PHE581 PRO582 PRO583 LYS584 ILE585 ARG586 THR587 TYR588
Unit 2 MET1 ARG2 LEU3 GLU4 PHE5 SER6 ILE7 TYR8 ARG9 TYR10 ASN11 PRO12 ASP13 VAL14 ASP15 ASP16 ALA17 PRO18 ARG19 MET20 GLN21 ASP22 TYR23 THR24 LEU25 GLU26 ALA27 ASP28 GLU29 GLY30 ARG31 ASP32 MET33 MET34 LEU35 LEU36 ASP37 ALA38 LEU39 ILE40 GLN41 LEU42 LYS43 GLU44 LYS45 ASP46 PRO47 SER48 LEU49 SER50 PHE51 ARG52 ARG53 SER54 CYS55 ARG56 GLU57 GLY58 VAL59 CYS60 GLY61 SER62 ASP63 GLY64 LEU65 ASN66 MET67 ASN68 GLY69 LYS70 ASN71 GLY72 LEU73 ALA74 CYS75 ILE76 THR77 PRO78 ILE79 SER80 ALA81 LEU82 ASN83 GLN84 PRO85 GLY86 LYS87 LYS88 ILE89 VAL90 ILE91 ARG92 PRO93 LEU94 PRO95 GLY96 LEU97 PRO98 VAL99 ILE100 ARG101 ASP102 LEU103 VAL104 VAL105 ASP106 MET107 GLY108 GLN109 PHE110 TYR111 ALA112 GLN113 TYR114 GLU115 LYS116 ILE117 LYS118 PRO119 TYR120 LEU121 LEU122 ASN123 ASN124 GLY125 GLN126 ASN127 PRO128 PRO129 ALA130 ARG131 GLU132 HIS133 LEU134 GLN135 MET136 PRO137 GLU138 GLN139 ARG140 GLU141 LYS142 LEU143 ASP144 GLY145 LEU146 TYR147 GLU148 CYS149 ILE150 LEU151 CYS152 ALA153 CYS154 CYS155 SER156 THR157 SER158 CYS159 PRO160 SER161 PHE162 TRP163 TRP164 ASN165 PRO166 ASP167 LYS168 PHE169 ILE170 GLY171 PRO172 ALA173 GLY174 LEU175 LEU176 ALA177 ALA178 TYR179 ARG180 PHE181 LEU182 ILE183 ASP184 SER185 ARG186 ASP187 THR188 GLU189 THR190 ASP191 SER192 ARG193 LEU194 ASP195 GLY196 LEU197 SER198 ASP199 ALA200 PHE201 SER202 VAL203 PHE204 ARG205 CYS206 HIS207 SER208 ILE209 MET210 ASN211 CYS212 VAL213 SER214 VAL215 CYS216 PRO217 LYS218 GLY219 LEU220 ASN221 PRO222 THR223 ARG224 ALA225 ILE226 GLY227 HIS228 ILE229 LYS230 SER231 MET232 LEU233 LEU234 GLN235 ARG236 ASN237 ALA238
Unit 3 MET1 ILE2 ARG3 ASN4 VAL5 LYS6 LYS7 GLN8 ARG9 PRO10 VAL11 ASN12 LEU13 ASP14 LEU15 GLN16 THR17 ILE18 ARG19 PHE20 PRO21 ILE22 THR23 ALA24 ILE25 ALA26 SER27 ILE28 LEU29 HIS30 ARG31 VAL32 SER33 GLY34 VAL35 ILE36 THR37 PHE38 VAL39 ALA40 VAL41 GLY42 ILE43 LEU44 LEU45 TRP46 LEU47 LEU48 GLY49 THR50 SER51 LEU52 SER53 SER54 PRO55 GLU56 GLY57 PHE58 GLU59 GLN60 ALA61 SER62 ALA63 ILE64 MET65 GLY66 SER67 PHE68 PHE69 VAL70 LYS71 PHE72 ILE73 MET74 TRP75 GLY76 ILE77 LEU78 THR79 ALA80 LEU81 ALA82 TYR83 HIS84 VAL85 VAL86 VAL87 GLY88 ILE89 ARG90 HIS91 MET92 MET93 MET94 ASP95 PHE96 GLY97 TYR98 LEU99 GLU100 GLU101 THR102 PHE103 GLU104 ALA105 GLY106 LYS107 ARG108 SER109 ALA110 LYS111 ILE112 SER113 PHE114 VAL115 ILE116 THR117 VAL118 VAL119 LEU120 SER121 LEU122 LEU123 ALA124 GLY125 VAL126 LEU127 VAL128 TRP129
Unit 4 SER3 ASN4 ALA5 SER6 ALA7 LEU8 GLY9 ARG10 ASN11 GLY12 VAL13 HIS14 ASP15 PHE16 ILE17 LEU18 VAL19 ARG20 ALA21 THR22 ALA23 ILE24 VAL25 LEU26 THR27 LEU28 TYR29 ILE30 ILE31 TYR32 MET33 VAL34 GLY35 PHE36 PHE37 ALA38 THR39 SER40 GLY41 GLU42 LEU43 THR44 TYR45 GLU46 VAL47 TRP48 ILE49 GLY50 PHE51 PHE52 ALA53 SER54 ALA55 PHE56 THR57 LYS58 VAL59 PHE60 THR61 LEU62 LEU63 ALA64 LEU65 PHE66 SER67 ILE68 LEU69 ILE70 HIS71 ALA72 TRP73 ILE74 GLY75 MET76 TRP77 GLN78 VAL79 LEU80 THR81 ASP82 TYR83 VAL84 LYS85 PRO86 LEU87 ALA88 LEU89 ARG90 LEU91 MET92 LEU93 GLN94 LEU95 VAL96 ILE97 VAL98 VAL99 ALA100 LEU101 VAL102 VAL103 TYR104 VAL105 ILE106 TYR107 GLY108 PHE109 VAL110 VAL111 VAL112 TRP113 GLY114 VAL115

Ligands
Unit 5 OAA589 FAD601
Unit 6 FES302 SF4303 F3S304
Unit 7 HEB130 AT5131 CDN132

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany