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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF LACTATE DEHYDROGENASE FROM PLASMODIUM V COMPLEX WITH NADH
Keywords ROSSMANN FOLD, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2A92     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   L-LACTATE DEHYDROGENASE  A 316 2399 0
2  Protein   L-LACTATE DEHYDROGENASE  B 315 2389 0
3  Protein   L-LACTATE DEHYDROGENASE  C 318 2419 0
4  Protein   L-LACTATE DEHYDROGENASE  D 315 2389 0
5  Ligand   L-LACTATE DEHYDROGENASE  A 1 0 44
6  Ligand   L-LACTATE DEHYDROGENASE  B 1 0 44
7  Ligand   L-LACTATE DEHYDROGENASE  C 1 0 44
8  Ligand   L-LACTATE DEHYDROGENASE  D 1 0 44
9 Water     480 0 480
total       1748 9596 656
Proteins
Unit 1 THR18 PRO19 LYS20 PRO21 LYS22 ILE23 VAL24 LEU25 VAL26 GLY27 SER28 GLY29 MET30 ILE31 GLY32 GLY33 VAL35 MET36 ALA37 THR38 LEU39 ILE40 VAL41 GLN42 LYS43 ASN44 LEU45 GLY46 ASP47 VAL49 VAL50 MET51 PHE52 ASP53 VAL54 VAL55 LYS56 ASN57 MET58 PRO59 GLN60 GLY61 LYS62 ALA63 LEU64 ASP65 THR66 SER67 HIS68 SER69 ASN70 VAL71 MET72 ALA73A TYR73B SER74 ASN75 CYS76 LYS77 VAL78 THR79 GLY80 SER81 ASN83 SER84 TYR85 ASP86 ASP87 LEU88 LYS89 GLY90 ALA91 ASP92 VAL93 VAL94 ILE95 VAL96 THR97 ALA98 GLY99 PHE100 THR101 LYS102 ALA103A PRO103B GLY103C LYS103D SER103E ASP105A LYS105B GLU106 TRP107 ASN108 ARG109 ASP110 ASP111 LEU112 LEU113 PRO114 LEU115 ASN116 ASN117 LYS118 ILE119 MET120 ILE121 GLU122 ILE123 GLY124 GLY125 HIS126 ILE127 LYS128 ASN129 LEU130 CYS131 PRO132A ASN132B ALA133 PHE134 ILE135 ILE136 VAL137 VAL138 THR139 ASN140 PRO141 VAL142 ASP143 VAL144 MET145 VAL146 GLN147 LEU148 LEU149 PHE150 GLU151 HIS152 SER153 GLY154 VAL155 PRO156 LYS157 ASN158 LYS159 ILE160 ILE161 GLY162 LEU163 GLY164 GLY165 VAL166 LEU167 ASP168 THR169 SER170 ARG171 LEU172 LYS173 TYR174 TYR175 ILE176 SER177 GLN178 LYS179 LEU180 ASN181 VAL182 CYS183 PRO184 ARG185 ASP186 VAL187 ASN188 ALA189 LEU190 ILE191 VAL192 GLY193 ALA194 HIS195 GLY196 ASN197 LYS198 MET199 VAL200 LEU201 LEU202 LYS203 ARG204 TYR205 ILE206 THR207 VAL208 GLY209A GLY209B ILE209C PRO209D LEU210A GLN210B GLU211 PHE212 ILE213 ASN214 ASN215 LYS216 LYS218 ILE219 THR220 ASP221 GLU222 GLU223 VAL225 GLU226 GLY227 ILE228 PHE229 ASP230 ARG231 THR232 VAL233 ASN234 THR235 ALA236 LEU237 GLU238 ILE239 VAL240 ASN241 LEU242 LEU243 ALA244 SER245 PRO246 TYR247 VAL248 ALA249 PRO250 ALA251 ALA252 ALA253 ILE254 ILE255 GLU256 MET257 ALA258 GLU259 SER260 TYR261 LEU262 LYS263 ASP264 ILE265 LYS266 LYS267 VAL268 LEU269 VAL270 CYS271 SER272 THR273 LEU274 LEU275 GLU276 GLY277 GLN278 TYR279 GLY280 HIS281 SER282 ASN283 ILE285 PHE286 GLY287 GLY288 THR289 PRO290 LEU291 VAL292 ILE293 GLY294 GLY295 THR296 GLY297 VAL298 GLU299 GLN301 VAL302 ILE303 GLU304 LEU305 GLN306 LEU307 ASN308 ALA309 GLU310 GLU311 LYS312 THR313 LYS314 PHE315 ASP316 GLU317 ALA318 VAL319 ALA320 GLU321 THR322 LYS323 ARG324 MET325 LYS326 ALA327 LEU328 ILE329 HIS330
Unit 2 THR18 PRO19 LYS20 PRO21 LYS22 ILE23 VAL24 LEU25 VAL26 GLY27 SER28 GLY29 MET30 ILE31 GLY32 GLY33 VAL35 MET36 ALA37 THR38 LEU39 ILE40 VAL41 GLN42 LYS43 ASN44 LEU45 GLY46 ASP47 VAL49 VAL50 MET51 PHE52 ASP53 VAL54 VAL55 LYS56 ASN57 MET58 PRO59 GLN60 GLY61 LYS62 ALA63 LEU64 ASP65 THR66 SER67 HIS68 SER69 ASN70 VAL71 MET72 ALA73A TYR73B SER74 ASN75 CYS76 LYS77 VAL78 THR79 GLY80 SER81 ASN83 SER84 TYR85 ASP86 ASP87 LEU88 LYS89 GLY90 ALA91 ASP92 VAL93 VAL94 ILE95 VAL96 THR97 ALA98 GLY99 PHE100 THR101 LYS102 ALA103A PRO103B GLY103C LYS103D SER103E ASP105A LYS105B GLU106 TRP107 ASN108 ARG109 ASP110 ASP111 LEU112 LEU113 PRO114 LEU115 ASN116 ASN117 LYS118 ILE119 MET120 ILE121 GLU122 ILE123 GLY124 GLY125 HIS126 ILE127 LYS128 ASN129 LEU130 CYS131 PRO132A ASN132B ALA133 PHE134 ILE135 ILE136 VAL137 VAL138 THR139 ASN140 PRO141 VAL142 ASP143 VAL144 MET145 VAL146 GLN147 LEU148 LEU149 PHE150 GLU151 HIS152 SER153 GLY154 VAL155 PRO156 LYS157 ASN158 LYS159 ILE160 ILE161 GLY162 LEU163 GLY164 GLY165 VAL166 LEU167 ASP168 THR169 SER170 ARG171 LEU172 LYS173 TYR174 TYR175 ILE176 SER177 GLN178 LYS179 LEU180 ASN181 VAL182 CYS183 PRO184 ARG185 ASP186 VAL187 ASN188 ALA189 LEU190 ILE191 VAL192 GLY193 ALA194 HIS195 GLY196 ASN197 LYS198 MET199 VAL200 LEU201 LEU202 LYS203 ARG204 TYR205 ILE206 THR207 VAL208 GLY209A GLY209B ILE209C PRO209D LEU210A GLN210B GLU211 PHE212 ILE213 ASN214 ASN215 LYS216 LYS218 ILE219 THR220 ASP221 GLU222 GLU223 VAL225 GLU226 GLY227 ILE228 PHE229 ASP230 ARG231 THR232 VAL233 ASN234 THR235 ALA236 LEU237 GLU238 ILE239 VAL240 ASN241 LEU242 LEU243 ALA244 SER245 PRO246 TYR247 VAL248 ALA249 PRO250 ALA251 ALA252 ALA253 ILE254 ILE255 GLU256 MET257 ALA258 GLU259 SER260 TYR261 LEU262 LYS263 ASP264 ILE265 LYS266 LYS267 VAL268 LEU269 VAL270 CYS271 SER272 THR273 LEU274 LEU275 GLU276 GLY277 GLN278 TYR279 GLY280 HIS281 SER282 ASN283 ILE285 PHE286 GLY287 GLY288 THR289 PRO290 LEU291 VAL292 ILE293 GLY294 GLY295 THR296 GLY297 VAL298 GLU299 GLN301 VAL302 ILE303 GLU304 LEU305 GLN306 LEU307 ASN308 ALA309 GLU310 GLU311 LYS312 THR313 LYS314 PHE315 ASP316 GLU317 ALA318 VAL319 ALA320 GLU321 THR322 LYS323 ARG324 MET325 LYS326 ALA327 LEU328 ILE329
Unit 3 THR18 PRO19 LYS20 PRO21 LYS22 ILE23 VAL24 LEU25 VAL26 GLY27 SER28 GLY29 MET30 ILE31 GLY32 GLY33 VAL35 MET36 ALA37 THR38 LEU39 ILE40 VAL41 GLN42 LYS43 ASN44 LEU45 GLY46 ASP47 VAL49 VAL50 MET51 PHE52 ASP53 VAL54 VAL55 LYS56 ASN57 MET58 PRO59 GLN60 GLY61 LYS62 ALA63 LEU64 ASP65 THR66 SER67 HIS68 SER69 ASN70 VAL71 MET72 ALA73A TYR73B SER74 ASN75 CYS76 LYS77 VAL78 THR79 GLY80 SER81 ASN83 SER84 TYR85 ASP86 ASP87 LEU88 LYS89 GLY90 ALA91 ASP92 VAL93 VAL94 ILE95 VAL96 THR97 ALA98 GLY99 PHE100 THR101 LYS102 ALA103A PRO103B GLY103C LYS103D SER103E ASP105A LYS105B GLU106 TRP107 ASN108 ARG109 ASP110 ASP111 LEU112 LEU113 PRO114 LEU115 ASN116 ASN117 LYS118 ILE119 MET120 ILE121 GLU122 ILE123 GLY124 GLY125 HIS126 ILE127 LYS128 ASN129 LEU130 CYS131 PRO132A ASN132B ALA133 PHE134 ILE135 ILE136 VAL137 VAL138 THR139 ASN140 PRO141 VAL142 ASP143 VAL144 MET145 VAL146 GLN147 LEU148 LEU149 PHE150 GLU151 HIS152 SER153 GLY154 VAL155 PRO156 LYS157 ASN158 LYS159 ILE160 ILE161 GLY162 LEU163 GLY164 GLY165 VAL166 LEU167 ASP168 THR169 SER170 ARG171 LEU172 LYS173 TYR174 TYR175 ILE176 SER177 GLN178 LYS179 LEU180 ASN181 VAL182 CYS183 PRO184 ARG185 ASP186 VAL187 ASN188 ALA189 LEU190 ILE191 VAL192 GLY193 ALA194 HIS195 GLY196 ASN197 LYS198 MET199 VAL200 LEU201 LEU202 LYS203 ARG204 TYR205 ILE206 THR207 VAL208 GLY209A GLY209B ILE209C PRO209D LEU210A GLN210B GLU211 PHE212 ILE213 ASN214 ASN215 LYS216 LYS218 ILE219 THR220 ASP221 GLU222 GLU223 VAL225 GLU226 GLY227 ILE228 PHE229 ASP230 ARG231 THR232 VAL233 ASN234 THR235 ALA236 LEU237 GLU238 ILE239 VAL240 ASN241 LEU242 LEU243 ALA244 SER245 PRO246 TYR247 VAL248 ALA249 PRO250 ALA251 ALA252 ALA253 ILE254 ILE255 GLU256 MET257 ALA258 GLU259 SER260 TYR261 LEU262 LYS263 ASP264 ILE265 LYS266 LYS267 VAL268 LEU269 VAL270 CYS271 SER272 THR273 LEU274 LEU275 GLU276 GLY277 GLN278 TYR279 GLY280 HIS281 SER282 ASN283 ILE285 PHE286 GLY287 GLY288 THR289 PRO290 LEU291 VAL292 ILE293 GLY294 GLY295 THR296 GLY297 VAL298 GLU299 GLN301 VAL302 ILE303 GLU304 LEU305 GLN306 LEU307 ASN308 ALA309 GLU310 GLU311 LYS312 THR313 LYS314 PHE315 ASP316 GLU317 ALA318 VAL319 ALA320 GLU321 THR322 LYS323 ARG324 MET325 LYS326 ALA327 LEU328 ILE329 HIS330 HIS331 HIS332
Unit 4 THR18 PRO19 LYS20 PRO21 LYS22 ILE23 VAL24 LEU25 VAL26 GLY27 SER28 GLY29 MET30 ILE31 GLY32 GLY33 VAL35 MET36 ALA37 THR38 LEU39 ILE40 VAL41 GLN42 LYS43 ASN44 LEU45 GLY46 ASP47 VAL49 VAL50 MET51 PHE52 ASP53 VAL54 VAL55 LYS56 ASN57 MET58 PRO59 GLN60 GLY61 LYS62 ALA63 LEU64 ASP65 THR66 SER67 HIS68 SER69 ASN70 VAL71 MET72 ALA73A TYR73B SER74 ASN75 CYS76 LYS77 VAL78 THR79 GLY80 SER81 ASN83 SER84 TYR85 ASP86 ASP87 LEU88 LYS89 GLY90 ALA91 ASP92 VAL93 VAL94 ILE95 VAL96 THR97 ALA98 GLY99 PHE100 THR101 LYS102 ALA103A PRO103B GLY103C LYS103D SER103E ASP105A LYS105B GLU106 TRP107 ASN108 ARG109 ASP110 ASP111 LEU112 LEU113 PRO114 LEU115 ASN116 ASN117 LYS118 ILE119 MET120 ILE121 GLU122 ILE123 GLY124 GLY125 HIS126 ILE127 LYS128 ASN129 LEU130 CYS131 PRO132A ASN132B ALA133 PHE134 ILE135 ILE136 VAL137 VAL138 THR139 ASN140 PRO141 VAL142 ASP143 VAL144 MET145 VAL146 GLN147 LEU148 LEU149 PHE150 GLU151 HIS152 SER153 GLY154 VAL155 PRO156 LYS157 ASN158 LYS159 ILE160 ILE161 GLY162 LEU163 GLY164 GLY165 VAL166 LEU167 ASP168 THR169 SER170 ARG171 LEU172 LYS173 TYR174 TYR175 ILE176 SER177 GLN178 LYS179 LEU180 ASN181 VAL182 CYS183 PRO184 ARG185 ASP186 VAL187 ASN188 ALA189 LEU190 ILE191 VAL192 GLY193 ALA194 HIS195 GLY196 ASN197 LYS198 MET199 VAL200 LEU201 LEU202 LYS203 ARG204 TYR205 ILE206 THR207 VAL208 GLY209A GLY209B ILE209C PRO209D LEU210A GLN210B GLU211 PHE212 ILE213 ASN214 ASN215 LYS216 LYS218 ILE219 THR220 ASP221 GLU222 GLU223 VAL225 GLU226 GLY227 ILE228 PHE229 ASP230 ARG231 THR232 VAL233 ASN234 THR235 ALA236 LEU237 GLU238 ILE239 VAL240 ASN241 LEU242 LEU243 ALA244 SER245 PRO246 TYR247 VAL248 ALA249 PRO250 ALA251 ALA252 ALA253 ILE254 ILE255 GLU256 MET257 ALA258 GLU259 SER260 TYR261 LEU262 LYS263 ASP264 ILE265 LYS266 LYS267 VAL268 LEU269 VAL270 CYS271 SER272 THR273 LEU274 LEU275 GLU276 GLY277 GLN278 TYR279 GLY280 HIS281 SER282 ASN283 ILE285 PHE286 GLY287 GLY288 THR289 PRO290 LEU291 VAL292 ILE293 GLY294 GLY295 THR296 GLY297 VAL298 GLU299 GLN301 VAL302 ILE303 GLU304 LEU305 GLN306 LEU307 ASN308 ALA309 GLU310 GLU311 LYS312 THR313 LYS314 PHE315 ASP316 GLU317 ALA318 VAL319 ALA320 GLU321 THR322 LYS323 ARG324 MET325 LYS326 ALA327 LEU328 ILE329
Ligands
Unit 5 NAI601
Unit 6 NAI701
Unit 7 NAI501
Unit 8 NAI801
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany