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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PARN NUCLEASE DOMAIN
Keywords PARN, DEDD, NUCLEASE DOMAIN, HYDROLASE-RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2A1R     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    C 3 63 0
2  RNA    D 3 63 0
3  Protein   POLY(A)-SPECIFIC RIBONUCLEASE PARN  A 300 2431 0
4  Protein   POLY(A)-SPECIFIC RIBONUCLEASE PARN  B 292 2368 0
5 Water     153 0 153
total       751 4925 153
Proteins
Unit 3 MET1 GLU2 ILE3 ILE4 ARG5 SER6 ASN7 PHE8 LYS9 SER10 ASN11 LEU12 HIS13 LYS14 VAL15 TYR16 GLN17 ALA18 ILE19 GLU20 GLU21 ALA22 ASP23 PHE24 PHE25 ALA26 ILE27 ASP28 GLY29 GLU30 PHE31 SER32 GLY33 ILE34 SER35 ASP36 GLY37 PRO38 SER39 VAL40 GLY46 PHE47 ASP48 THR49 PRO50 GLU51 GLU52 ARG53 TYR54 GLN55 LYS56 LEU57 LYS58 LYS59 HIS60 SER61 MET62 ASP63 PHE64 LEU65 LEU66 PHE67 GLN68 PHE69 GLY70 LEU71 CYS72 THR73 PHE74 LYS75 TYR76 ASP77 TYR78 THR79 ASP80 SER81 LYS82 TYR83 ILE84 THR85 LYS86 SER87 PHE88 ASN89 PHE90 TYR91 VAL92 PHE93 PRO94 LYS95 PRO96 PHE97 ASN98 ARG99 SER100 SER101 PRO102 ASP103 VAL104 LYS105 PHE106 VAL107 CYS108 GLN109 SER110 SER111 SER112 ILE113 ASP114 PHE115 LEU116 ALA117 SER118 GLN119 GLY120 PHE121 ASP122 PHE123 ASN124 LYS125 VAL126 PHE127 ARG128 ASN129 GLY130 ILE131 PRO132 TYR133 LEU134 ASN135 GLN136 GLU137 GLU138 GLU139 ARG140 GLN141 LEU142 ARG143 HIS257 ALA258 LYS259 GLU260 GLN261 GLU262 GLU263 LEU264 ASN265 ASP266 ALA267 VAL268 GLY269 PHE270 SER271 ARG272 VAL273 ILE274 HIS275 ALA276 ILE277 ALA278 ASN279 SER280 GLY281 LYS282 LEU283 VAL284 ILE285 GLY286 HIS287 ASN288 MET289 LEU290 LEU291 ASP292 VAL293 MET294 HIS295 THR296 VAL297 HIS298 GLN299 PHE300 TYR301 CYS302 PRO303 LEU304 PRO305 ALA306 ASP307 LEU308 SER309 GLU310 PHE311 LYS312 GLU313 MET314 THR315 THR316 CYS317 VAL318 PHE319 PRO320 ARG321 LEU322 LEU323 ASP324 THR325 LYS326 LEU327 MET328 ALA329 SER330 THR331 GLN332 PRO333 PHE334 LYS335 ASP336 ILE337 ILE338 ASN339 ASN340 THR341 SER342 LEU343 ALA344 GLU345 LEU346 GLU347 LYS348 ARG349 LEU350 LYS351 GLU352 THR353 PRO354 PHE355 ASN356 PRO357 PRO358 LYS359 VAL360 GLU361 SER362 ALA363 GLU364 GLY365 PHE366 PRO367 SER368 TYR369 GLN375 LEU376 HIS377 GLU378 ALA379 GLY380 TYR381 ASP382 ALA383 TYR384 ILE385 THR386 GLY387 LEU388 CYS389 PHE390 ILE391 SER392 MET393 ALA394 ASN395 TYR396 LEU397 GLY398 SER399 PHE400 LEU401 SER402 PRO403 PRO404 LYS405 ILE406 HIS407 VAL408 SER409 ALA410 ARG411 SER412 LYS413 LEU414 ILE415 GLU416 PRO417 PHE418 PHE419 ASN420 LYS421 LEU422 PHE423
Unit 4 MET1 GLU2 ILE3 ILE4 ARG5 SER6 ASN7 PHE8 LYS9 SER10 ASN11 LEU12 HIS13 LYS14 VAL15 TYR16 GLN17 ALA18 ILE19 GLU20 GLU21 ALA22 ASP23 PHE24 PHE25 ALA26 ILE27 ASP28 GLY29 GLU30 PHE31 SER32 GLY33 ILE34 SER35 ASP36 GLY37 PRO38 SER39 VAL40 PRO50 GLU51 GLU52 ARG53 TYR54 GLN55 LYS56 LEU57 LYS58 LYS59 HIS60 SER61 MET62 ASP63 PHE64 LEU65 LEU66 PHE67 GLN68 PHE69 GLY70 LEU71 CYS72 THR73 PHE74 LYS75 TYR76 ASP77 TYR78 THR79 ASP80 SER81 LYS82 TYR83 ILE84 THR85 LYS86 SER87 PHE88 ASN89 PHE90 TYR91 VAL92 PHE93 PRO94 LYS95 PRO96 PHE97 ASN98 ARG99 SER100 SER101 PRO102 ASP103 VAL104 LYS105 PHE106 VAL107 CYS108 GLN109 SER110 SER111 SER112 ILE113 ASP114 PHE115 LEU116 ALA117 SER118 GLN119 GLY120 PHE121 ASP122 PHE123 ASN124 LYS125 VAL126 PHE127 ARG128 ASN129 GLY130 ILE131 PRO132 TYR133 LEU134 ASN135 GLN136 GLU137 GLU138 GLU139 ARG140 GLN141 LEU142 ARG143 GLN261 GLU262 GLU263 LEU264 ASN265 ASP266 ALA267 VAL268 GLY269 PHE270 SER271 ARG272 VAL273 ILE274 HIS275 ALA276 ILE277 ALA278 ASN279 SER280 GLY281 LYS282 LEU283 VAL284 ILE285 GLY286 HIS287 ASN288 MET289 LEU290 LEU291 ASP292 VAL293 MET294 HIS295 THR296 VAL297 HIS298 GLN299 PHE300 TYR301 CYS302 PRO303 LEU304 PRO305 ALA306 ASP307 LEU308 SER309 GLU310 PHE311 LYS312 GLU313 MET314 THR315 THR316 CYS317 VAL318 PHE319 PRO320 ARG321 LEU322 LEU323 ASP324 THR325 LYS326 LEU327 MET328 ALA329 SER330 THR331 GLN332 PRO333 PHE334 LYS335 ASP336 ILE337 ILE338 ASN339 ASN340 THR341 SER342 LEU343 ALA344 GLU345 LEU346 GLU347 LYS348 ARG349 LEU350 LYS351 GLU352 THR353 PRO354 PHE355 ASN356 PRO357 PRO358 LYS359 VAL360 GLU361 SER362 ALA363 GLU364 GLY365 PHE366 PRO367 SER368 TYR369 GLN375 LEU376 HIS377 GLU378 ALA379 GLY380 TYR381 ASP382 ALA383 TYR384 ILE385 THR386 GLY387 LEU388 CYS389 PHE390 ILE391 SER392 MET393 ALA394 ASN395 TYR396 LEU397 GLY398 SER399 PHE400 LEU401 SER402 PRO403 PRO404 LYS405 ILE406 HIS407 VAL408 SER409 ALA410 ARG411 SER412 LYS413 LEU414 ILE415 GLU416 PRO417 PHE418 PHE419 ASN420 LYS421 LEU422 PHE423
Nucleic acids
Unit 1 A501 A502 A503
Unit 2 A601 A602 A603
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany