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Title | CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF MMP-13 COMPLEXED WITH WAY-033 | |
Keywords | MMPS, METALLOPROTEASE, HYDROLASE, MMP-13, COLLAGENASE, ZINC CHELATOR, HYDROXAMATE, HYDROPHOBIC S1', P1' GROUP | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1ZTQ | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | COLLAGENASE 3 | A | 162 | 1293 | 0 |
2 | Protein | COLLAGENASE 3 | B | 160 | 1274 | 0 |
3 | Protein | COLLAGENASE 3 | C | 153 | 1218 | 0 |
4 | Protein | COLLAGENASE 3 | D | 156 | 1245 | 0 |
5 | Ligand | COLLAGENASE 3 | A | 6 | 0 | 40 |
6 | Ligand | COLLAGENASE 3 | B | 6 | 0 | 40 |
7 | Ligand | COLLAGENASE 3 | C | 6 | 0 | 40 |
8 | Ligand | COLLAGENASE 3 | D | 6 | 0 | 40 |
9 | Water | 502 | 0 | 502 | ||
total | 1157 | 5030 | 662 |
Unit 1 | TYR79 ASN80 VAL81 PHE82 LEU86 LYS87 TRP88 SER89 LYS90 MET91 ASN92 LEU93 THR94 TYR95 ARG96 ILE97 VAL98 ASN99 TYR100 THR101 PRO102 ASP103 MET104 THR105 HIS106 SER107 GLU108 VAL109 GLU110 LYS111 ALA112 PHE113 LYS114 LYS115 ALA116 PHE117 LYS118 VAL119 TRP120 SER121 ASP122 VAL123 THR124 PRO125 LEU126 ASN127 PHE128 THR129 ARG130 LEU131 HIS132 ASP133 GLY134 ILE135 ALA136 ASP137 ILE138 MET139 ILE140 SER141 PHE142 GLY143 ILE144 LYS145 GLU146 HIS147 GLY148 ASP149 PHE150 TYR151 PRO152 PHE153 ASP154 GLY155 PRO156 SER157 GLY158 LEU159 LEU160 ALA161 HIS162 ALA163 PHE164 PRO165 PRO166 GLY167 PRO168 ASN169 TYR170 GLY171 GLY172 ASP173 ALA174 HIS175 PHE176 ASP177 ASP178 ASP179 GLU180 THR181 TRP182 THR183 SER184 SER185 SER186 LYS187 GLY188 TYR189 ASN190 LEU191 PHE192 LEU193 VAL194 ALA195 ALA196 HIS197 GLU198 PHE199 GLY200 HIS201 SER202 LEU203 GLY204 LEU205 ASP206 HIS207 SER208 LYS209 ASP210 PRO211 GLY212 ALA213 LEU214 MET215 PHE216 PRO217 ILE218 TYR219 THR220 TYR221 THR222 GLY223 LYS224 SER225 HIS226 PHE227 MET228 LEU229 PRO230 ASP231 ASP232 ASP233 VAL234 GLN235 GLY236 ILE237 GLN238 SER239 LEU240 TYR241 GLY242 PRO243 |
Unit 2 | TYR79 ASN80 VAL81 LYS87 TRP88 SER89 LYS90 MET91 ASN92 LEU93 THR94 TYR95 ARG96 ILE97 VAL98 ASN99 TYR100 THR101 PRO102 ASP103 MET104 THR105 HIS106 SER107 GLU108 VAL109 GLU110 LYS111 ALA112 PHE113 LYS114 LYS115 ALA116 PHE117 LYS118 VAL119 TRP120 SER121 ASP122 VAL123 THR124 PRO125 LEU126 ASN127 PHE128 THR129 ARG130 LEU131 HIS132 ASP133 GLY134 ILE135 ALA136 ASP137 ILE138 MET139 ILE140 SER141 PHE142 GLY143 ILE144 LYS145 GLU146 HIS147 GLY148 ASP149 PHE150 TYR151 PRO152 PHE153 ASP154 GLY155 PRO156 SER157 GLY158 LEU159 LEU160 ALA161 HIS162 ALA163 PHE164 PRO165 PRO166 GLY167 PRO168 ASN169 TYR170 GLY171 GLY172 ASP173 ALA174 HIS175 PHE176 ASP177 ASP178 ASP179 GLU180 THR181 TRP182 THR183 SER184 SER185 SER186 LYS187 GLY188 TYR189 ASN190 LEU191 PHE192 LEU193 VAL194 ALA195 ALA196 HIS197 GLU198 PHE199 GLY200 HIS201 SER202 LEU203 GLY204 LEU205 ASP206 HIS207 SER208 LYS209 ASP210 PRO211 GLY212 ALA213 LEU214 MET215 PHE216 PRO217 ILE218 TYR219 THR220 TYR221 THR222 GLY223 LYS224 SER225 HIS226 PHE227 MET228 LEU229 PRO230 ASP231 ASP232 ASP233 VAL234 GLN235 GLY236 ILE237 GLN238 SER239 LEU240 TYR241 GLY242 PRO243 |
Unit 3 | TYR79 ASN80 VAL81 PHE82 LEU86 LYS87 TRP88 SER89 LYS90 MET91 ASN92 LEU93 THR94 TYR95 ARG96 ILE97 VAL98 ASN99 TYR100 THR101 PRO102 ASP103 MET104 THR105 HIS106 SER107 GLU108 VAL109 GLU110 LYS111 ALA112 PHE113 LYS114 LYS115 ALA116 PHE117 LYS118 VAL119 TRP120 SER121 ASP122 VAL123 THR124 PRO125 LEU126 ASN127 PHE128 THR129 ARG130 LEU131 HIS132 ASP133 GLY134 ILE135 ALA136 ASP137 ILE138 MET139 ILE140 SER141 PHE142 GLY143 ILE144 LYS145 GLU146 HIS147 GLY148 ASP149 PHE150 TYR151 PRO152 PHE153 ASP154 GLY155 PRO156 SER157 GLY158 LEU159 LEU160 ALA161 HIS162 ALA163 PHE164 PRO165 PRO166 GLY167 PRO168 ASN169 TYR170 GLY171 GLY172 ASP173 ALA174 HIS175 PHE176 ASP177 ASP178 ASP179 GLU180 THR181 TRP182 THR183 SER184 SER185 SER186 LYS187 GLY188 TYR189 ASN190 LEU191 PHE192 LEU193 VAL194 ALA195 ALA196 HIS197 GLU198 PHE199 GLY200 HIS201 SER202 LEU203 GLY204 LEU205 ASP206 HIS207 SER208 LYS209 ASP210 PRO211 GLY212 ALA213 LEU214 MET215 PHE216 PRO217 ILE218 TYR219 THR220 PRO230 ASP231 ASP232 ASP233 VAL234 GLN235 GLY236 ILE237 GLN238 SER239 LEU240 TYR241 GLY242 PRO243 |
Unit 4 | TYR79 ASN80 VAL81 PHE82 LEU86 LYS87 TRP88 SER89 LYS90 MET91 ASN92 LEU93 THR94 TYR95 ARG96 ILE97 VAL98 ASN99 TYR100 THR101 PRO102 ASP103 MET104 THR105 HIS106 SER107 GLU108 VAL109 GLU110 LYS111 ALA112 PHE113 LYS114 LYS115 ALA116 PHE117 LYS118 VAL119 TRP120 SER121 ASP122 VAL123 THR124 PRO125 LEU126 ASN127 PHE128 THR129 ARG130 LEU131 HIS132 ASP133 GLY134 ILE135 ALA136 ASP137 ILE138 MET139 ILE140 SER141 PHE142 GLY143 ILE144 LYS145 GLU146 HIS147 GLY148 ASP149 PHE150 TYR151 PRO152 PHE153 ASP154 GLY155 PRO156 SER157 GLY158 LEU159 LEU160 ALA161 HIS162 ALA163 PHE164 PRO165 PRO166 GLY167 PRO168 ASN169 TYR170 GLY171 GLY172 ASP173 ALA174 HIS175 PHE176 ASP177 ASP178 ASP179 GLU180 THR181 TRP182 THR183 SER184 SER185 SER186 LYS187 GLY188 TYR189 ASN190 LEU191 PHE192 LEU193 VAL194 ALA195 ALA196 HIS197 GLU198 PHE199 GLY200 HIS201 SER202 LEU203 GLY204 LEU205 ASP206 HIS207 SER208 LYS209 ASP210 PRO211 GLY212 ALA213 LEU214 MET215 PHE216 PRO217 ILE218 TYR219 THR220 PHE227 MET228 LEU229 PRO230 ASP231 ASP232 ASP233 VAL234 GLN235 GLY236 ILE237 GLN238 SER239 LEU240 TYR241 GLY242 PRO243 |
Unit 5 | ZN550 ZN551 CA560 CA561 CA562 033601 |
Unit 6 | ZN552 ZN553 CA563 CA564 CA565 033602 |
Unit 7 | ZN554 ZN555 CA566 CA567 CA568 033603 |
Unit 8 | ZN556 ZN557 CA569 CA570 CA571 033604 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |