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Sequence, Chains, Asymmetric and Biological Units

Title RHODOBACTER CAPSULATUS CYTOCHROME BC1 COMPLEX WITH STIGMATELLIN BOUND
Keywords CYTOCHROME BC1, MEMBRANE PROTEIN, HEME PROTEIN, RIESKE IRON SULFUR PROTEIN, CYTOCHROME B, CYTOCHROME C1, COMPLEX III, OXIDOREDUCTASE, REDOX ENZYME, RESPIRATORY CHAIN, STIGMATELLIN, OXIDOREDUCTASE/METAL TRANSPORT COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1ZRT     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CYTOCHROME B  C 427 3272 0
2  Protein   CYTOCHROME C1  D 252 1876 0
3  Protein   UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT  E 181 1365 0
4  Protein   CYTOCHROME B  P 427 3272 0
5  Protein   CYTOCHROME C1  Q 252 1876 0
6  Protein   UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT  R 181 1365 0
7  Ligand   CYTOCHROME B  C 3 0 123
8  Ligand   CYTOCHROME C1  D 1 0 43
9  Ligand   UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT  E 1 0 4
10  Ligand   CYTOCHROME B  P 3 0 123
11  Ligand   CYTOCHROME C1  Q 1 0 43
12  Ligand   UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT  R 1 0 4
total       1730 13026 340
Proteins
Unit 1 SER2 GLY3 ILE4 PRO5 HIS6 ASP7 HIS8 TYR9 GLU10 PRO11 LYS12 THR13 GLY14 ILE15 GLU16 LYS17 TRP18 LEU19 HIS20 ASP21 ARG22 LEU23 PRO24 ILE25 VAL26 GLY27 LEU28 VAL29 TYR30 ASP31 THR32 ILE33 MET34 ILE35 PRO36 THR37 PRO38 LYS39 ASN40 LEU41 ASN42 TRP43 TRP44 TRP45 ILE46 TRP47 GLY48 ILE49 VAL50 LEU51 ALA52 PHE53 THR54 LEU55 VAL56 LEU57 GLN58 ILE59 VAL60 THR61 GLY62 ILE63 VAL64 LEU65 ALA66 MET67 HIS68 TYR69 THR70 PRO71 HIS72 VAL73 ASP74 LEU75 ALA76 PHE77 ALA78 SER79 VAL80 GLU81 HIS82 ILE83 MET84 ARG85 ASP86 VAL87 ASN88 GLY89 GLY90 TRP91 ALA92 MET93 ARG94 TYR95 ILE96 HIS97 ALA98 ASN99 GLY100 ALA101 SER102 LEU103 PHE104 PHE105 LEU106 ALA107 VAL108 TYR109 ILE110 HIS111 ILE112 PHE113 ARG114 GLY115 LEU116 TYR117 TYR118 GLY119 SER120 TYR121 LYS122 ALA123 PRO124 ARG125 GLU126 ILE127 THR128 TRP129 ILE130 VAL131 GLY132 MET133 VAL134 ILE135 TYR136 LEU137 LEU138 MET139 MET140 GLY141 THR142 ALA143 PHE144 MET145 GLY146 TYR147 VAL148 LEU149 PRO150 TRP151 GLY152 GLN153 MET154 SER155 PHE156 TRP157 GLY158 ALA159 THR160 VAL161 ILE162 THR163 GLY164 LEU165 PHE166 GLY167 ALA168 ILE169 PRO170 GLY171 ILE172 GLY173 PRO174 SER175 ILE176 GLN177 ALA178 TRP179 LEU180 LEU181 GLY182 GLY183 PRO184 ALA185 VAL186 ASP187 ASN188 ALA189 THR190 LEU191 ASN192 ARG193 PHE194 PHE195 SER196 LEU197 HIS198 TYR199 LEU200 LEU201 PRO202 PHE203 VAL204 ILE205 ALA206 ALA207 LEU208 VAL209 ALA210 ILE211 HIS212 ILE213 TRP214 ALA215 PHE216 HIS217 THR218 THR219 GLY220 ASN221 ASN222 ASN223 PRO224 THR225 GLY226 VAL227 GLU228 VAL229 ARG230 ARG231 THR232 SER233 LYS234 ALA235 ASP236 ALA237 GLU238 LYS239 ASP240 THR241 LEU242 PRO243 PHE244 TRP245 PRO246 TYR247 PHE248 VAL249 ILE250 LYS251 ASP252 LEU253 PHE254 ALA255 LEU256 ALA257 LEU258 VAL259 LEU260 LEU261 GLY262 PHE263 PHE264 ALA265 VAL266 VAL267 ALA268 TYR269 MET270 PRO271 ASN272 TYR273 LEU274 GLY275 HIS276 PRO277 ASP278 ASN279 TYR280 VAL281 GLN282 ALA283 ASN284 PRO285 LEU286 SER287 THR288 PRO289 ALA290 HIS291 ILE292 VAL293 PRO294 GLU295 TRP296 TYR297 PHE298 LEU299 PRO300 PHE301 TYR302 ALA303 ILE304 LEU305 ARG306 ALA307 PHE308 ALA309 ALA310 ASP311 VAL312 TRP313 VAL314 VAL315 ILE316 LEU317 VAL318 ASP319 GLY320 LEU321 THR322 PHE323 GLY324 ILE325 VAL326 ASP327 ALA328 LYS329 PHE330 PHE331 GLY332 VAL333 ILE334 ALA335 MET336 PHE337 GLY338 ALA339 ILE340 ALA341 VAL342 MET343 ALA344 LEU345 ALA346 PRO347 TRP348 LEU349 ASP350 THR351 SER352 LYS353 VAL354 ARG355 SER356 GLY357 ALA358 TYR359 ARG360 PRO361 LYS362 PHE363 ARG364 MET365 TRP366 PHE367 TRP368 PHE369 LEU370 VAL371 LEU372 ASP373 PHE374 VAL375 VAL376 LEU377 THR378 TRP379 VAL380 GLY381 ALA382 MET383 PRO384 THR385 GLU386 TYR387 PRO388 TYR389 ASP390 TRP391 ILE392 SER393 LEU394 ILE395 ALA396 SER397 THR398 TYR399 TRP400 PHE401 ALA402 TYR403 PHE404 LEU405 VAL406 ILE407 LEU408 PRO409 LEU410 LEU411 GLY412 ALA413 THR414 GLU415 LYS416 PRO417 GLU418 PRO419 ILE420 PRO421 ALA422 SER423 ILE424 GLU425 GLU426 ASP427 PHE428
Unit 2 SER2 ASN3 VAL4 PRO5 ASP6 HIS7 ALA8 PHE9 SER10 PHE11 GLU12 GLY13 ILE14 PHE15 GLY16 LYS17 TYR18 ASP19 GLN20 ALA21 GLN22 LEU23 ARG24 ARG25 GLY26 PHE27 GLN28 VAL29 TYR30 ASN31 GLU32 VAL33 CYS34 SER35 ALA36 CYS37 HIS38 GLY39 MET40 LYS41 PHE42 VAL43 PRO44 ILE45 ARG46 THR47 LEU48 ALA49 ASP50 ASP51 GLY52 GLY53 PRO54 GLN55 LEU56 ASP57 PRO58 THR59 PHE60 VAL61 ARG62 GLU63 TYR64 ALA65 ALA66 GLY67 LEU68 ASP69 THR70 ILE71 ILE72 ASP73 LYS74 ASP75 SER76 GLY77 GLU78 GLU79 ARG80 ASP81 ARG82 LYS83 GLU84 THR85 ASP86 MET87 PHE88 PRO89 THR90 ARG91 VAL92 GLY93 ASP94 GLY95 MET96 GLY97 PRO98 ASP99 LEU100 SER101 VAL102 MET103 ALA104 LYS105 ALA106 ARG107 ALA108 GLY109 PHE110 SER111 GLY112 PRO113 ALA114 GLY115 SER116 GLY117 MET118 ASN119 GLN120 LEU121 PHE122 LYS123 GLY124 MET125 GLY126 GLY127 PRO128 GLU129 TYR130 ILE131 TYR132 ASN133 TYR134 VAL135 ILE136 GLY137 PHE138 GLU139 GLU140 ASN141 PRO142 GLU143 CYS144 ALA145 PRO146 GLU147 GLY148 ILE149 ASP150 GLY151 TYR152 TYR153 TYR154 ASN155 LYS156 THR157 PHE158 GLN159 ILE160 GLY161 PRO164 ASP165 THR166 CYS167 LYS168 GLY172 VAL173 LYS174 ILE175 THR176 HIS177 GLY178 SER179 TRP180 ALA181 ARG182 MET183 PRO184 PRO185 PRO186 LEU187 VAL188 ASP189 ASP190 GLN191 VAL192 THR193 TYR194 GLU195 ASP196 GLY197 THR198 PRO199 ALA200 THR201 VAL202 ASP203 GLN204 MET205 ALA206 GLN207 ASP208 VAL209 SER210 ALA211 PHE212 LEU213 MET214 TRP215 ALA216 ALA217 GLU218 PRO219 LYS220 LEU221 VAL222 ALA223 ARG224 LYS225 GLN226 MET227 GLY228 LEU229 VAL230 ALA231 MET232 VAL233 MET234 LEU235 GLY236 LEU237 LEU238 SER239 VAL240 MET241 LEU242 TYR243 LEU244 THR245 ASN246 LYS247 ARG248 LEU249 TRP250 ALA251 PRO252 TYR253 LYS254 GLY255 HIS256 LYS257 ALA258
Unit 3 ARG11 ARG12 ASP13 PHE14 LEU15 TYR16 HIS17 ALA18 THR19 ALA20 ALA21 THR22 GLY23 VAL24 VAL25 VAL26 THR27 GLY28 ALA29 ALA30 VAL31 TRP32 PRO33 LEU34 ILE35 ASN36 GLN37 MET38 ASN39 ALA40 SER41 ALA42 ASP43 VAL44 LYS45 ALA46 MET47 ALA48 SER49 ILE50 PHE51 VAL52 ASP53 VAL54 SER55 ALA56 VAL57 GLU58 VAL59 GLY60 THR61 GLN62 LEU63 THR64 VAL65 LYS66 TRP67 ARG68 GLY69 LYS70 PRO71 VAL72 PHE73 ILE74 ARG75 ARG76 ARG77 ASP78 GLU79 LYS80 ASP81 ILE82 GLU83 LEU84 ALA85 ARG86 SER87 VAL88 PRO89 LEU90 GLY91 ALA92 LEU93 ARG94 ASP95 THR96 SER97 ALA98 GLU99 ASN100 ALA101 ASN102 LYS103 PRO104 GLY105 ALA106 GLU107 ALA108 THR109 ASP110 GLU111 ASN112 ARG113 THR114 LEU115 PRO116 ALA117 PHE118 ASP119 GLY120 THR121 ASN122 THR123 GLY124 GLU125 TRP126 LEU127 VAL128 MET129 LEU130 GLY131 VAL132 CYS133 THR134 HIS135 LEU136 GLY137 CYS138 VAL139 PRO140 MET141 GLY142 ASP143 LYS144 SER145 GLY146 ASP147 PHE148 GLY149 GLY150 TRP151 PHE152 CYS153 PRO154 CYS155 HIS156 GLY157 SER158 HIS159 TYR160 ASP161 SER162 ALA163 GLY164 ARG165 ILE166 ARG167 LYS168 GLY169 PRO170 ALA171 PRO172 ARG173 ASN174 LEU175 ASP176 ILE177 PRO178 VAL179 ALA180 ALA181 PHE182 VAL183 ASP184 GLU185 THR186 THR187 ILE188 LYS189 LEU190 GLY191
Unit 4 SER2 GLY3 ILE4 PRO5 HIS6 ASP7 HIS8 TYR9 GLU10 PRO11 LYS12 THR13 GLY14 ILE15 GLU16 LYS17 TRP18 LEU19 HIS20 ASP21 ARG22 LEU23 PRO24 ILE25 VAL26 GLY27 LEU28 VAL29 TYR30 ASP31 THR32 ILE33 MET34 ILE35 PRO36 THR37 PRO38 LYS39 ASN40 LEU41 ASN42 TRP43 TRP44 TRP45 ILE46 TRP47 GLY48 ILE49 VAL50 LEU51 ALA52 PHE53 THR54 LEU55 VAL56 LEU57 GLN58 ILE59 VAL60 THR61 GLY62 ILE63 VAL64 LEU65 ALA66 MET67 HIS68 TYR69 THR70 PRO71 HIS72 VAL73 ASP74 LEU75 ALA76 PHE77 ALA78 SER79 VAL80 GLU81 HIS82 ILE83 MET84 ARG85 ASP86 VAL87 ASN88 GLY89 GLY90 TRP91 ALA92 MET93 ARG94 TYR95 ILE96 HIS97 ALA98 ASN99 GLY100 ALA101 SER102 LEU103 PHE104 PHE105 LEU106 ALA107 VAL108 TYR109 ILE110 HIS111 ILE112 PHE113 ARG114 GLY115 LEU116 TYR117 TYR118 GLY119 SER120 TYR121 LYS122 ALA123 PRO124 ARG125 GLU126 ILE127 THR128 TRP129 ILE130 VAL131 GLY132 MET133 VAL134 ILE135 TYR136 LEU137 LEU138 MET139 MET140 GLY141 THR142 ALA143 PHE144 MET145 GLY146 TYR147 VAL148 LEU149 PRO150 TRP151 GLY152 GLN153 MET154 SER155 PHE156 TRP157 GLY158 ALA159 THR160 VAL161 ILE162 THR163 GLY164 LEU165 PHE166 GLY167 ALA168 ILE169 PRO170 GLY171 ILE172 GLY173 PRO174 SER175 ILE176 GLN177 ALA178 TRP179 LEU180 LEU181 GLY182 GLY183 PRO184 ALA185 VAL186 ASP187 ASN188 ALA189 THR190 LEU191 ASN192 ARG193 PHE194 PHE195 SER196 LEU197 HIS198 TYR199 LEU200 LEU201 PRO202 PHE203 VAL204 ILE205 ALA206 ALA207 LEU208 VAL209 ALA210 ILE211 HIS212 ILE213 TRP214 ALA215 PHE216 HIS217 THR218 THR219 GLY220 ASN221 ASN222 ASN223 PRO224 THR225 GLY226 VAL227 GLU228 VAL229 ARG230 ARG231 THR232 SER233 LYS234 ALA235 ASP236 ALA237 GLU238 LYS239 ASP240 THR241 LEU242 PRO243 PHE244 TRP245 PRO246 TYR247 PHE248 VAL249 ILE250 LYS251 ASP252 LEU253 PHE254 ALA255 LEU256 ALA257 LEU258 VAL259 LEU260 LEU261 GLY262 PHE263 PHE264 ALA265 VAL266 VAL267 ALA268 TYR269 MET270 PRO271 ASN272 TYR273 LEU274 GLY275 HIS276 PRO277 ASP278 ASN279 TYR280 VAL281 GLN282 ALA283 ASN284 PRO285 LEU286 SER287 THR288 PRO289 ALA290 HIS291 ILE292 VAL293 PRO294 GLU295 TRP296 TYR297 PHE298 LEU299 PRO300 PHE301 TYR302 ALA303 ILE304 LEU305 ARG306 ALA307 PHE308 ALA309 ALA310 ASP311 VAL312 TRP313 VAL314 VAL315 ILE316 LEU317 VAL318 ASP319 GLY320 LEU321 THR322 PHE323 GLY324 ILE325 VAL326 ASP327 ALA328 LYS329 PHE330 PHE331 GLY332 VAL333 ILE334 ALA335 MET336 PHE337 GLY338 ALA339 ILE340 ALA341 VAL342 MET343 ALA344 LEU345 ALA346 PRO347 TRP348 LEU349 ASP350 THR351 SER352 LYS353 VAL354 ARG355 SER356 GLY357 ALA358 TYR359 ARG360 PRO361 LYS362 PHE363 ARG364 MET365 TRP366 PHE367 TRP368 PHE369 LEU370 VAL371 LEU372 ASP373 PHE374 VAL375 VAL376 LEU377 THR378 TRP379 VAL380 GLY381 ALA382 MET383 PRO384 THR385 GLU386 TYR387 PRO388 TYR389 ASP390 TRP391 ILE392 SER393 LEU394 ILE395 ALA396 SER397 THR398 TYR399 TRP400 PHE401 ALA402 TYR403 PHE404 LEU405 VAL406 ILE407 LEU408 PRO409 LEU410 LEU411 GLY412 ALA413 THR414 GLU415 LYS416 PRO417 GLU418 PRO419 ILE420 PRO421 ALA422 SER423 ILE424 GLU425 GLU426 ASP427 PHE428
Unit 5 SER2 ASN3 VAL4 PRO5 ASP6 HIS7 ALA8 PHE9 SER10 PHE11 GLU12 GLY13 ILE14 PHE15 GLY16 LYS17 TYR18 ASP19 GLN20 ALA21 GLN22 LEU23 ARG24 ARG25 GLY26 PHE27 GLN28 VAL29 TYR30 ASN31 GLU32 VAL33 CYS34 SER35 ALA36 CYS37 HIS38 GLY39 MET40 LYS41 PHE42 VAL43 PRO44 ILE45 ARG46 THR47 LEU48 ALA49 ASP50 ASP51 GLY52 GLY53 PRO54 GLN55 LEU56 ASP57 PRO58 THR59 PHE60 VAL61 ARG62 GLU63 TYR64 ALA65 ALA66 GLY67 LEU68 ASP69 THR70 ILE71 ILE72 ASP73 LYS74 ASP75 SER76 GLY77 GLU78 GLU79 ARG80 ASP81 ARG82 LYS83 GLU84 THR85 ASP86 MET87 PHE88 PRO89 THR90 ARG91 VAL92 GLY93 ASP94 GLY95 MET96 GLY97 PRO98 ASP99 LEU100 SER101 VAL102 MET103 ALA104 LYS105 ALA106 ARG107 ALA108 GLY109 PHE110 SER111 GLY112 PRO113 ALA114 GLY115 SER116 GLY117 MET118 ASN119 GLN120 LEU121 PHE122 LYS123 GLY124 MET125 GLY126 GLY127 PRO128 GLU129 TYR130 ILE131 TYR132 ASN133 TYR134 VAL135 ILE136 GLY137 PHE138 GLU139 GLU140 ASN141 PRO142 GLU143 CYS144 ALA145 PRO146 GLU147 GLY148 ILE149 ASP150 GLY151 TYR152 TYR153 TYR154 ASN155 LYS156 THR157 PHE158 GLN159 ILE160 GLY161 PRO164 ASP165 THR166 CYS167 LYS168 GLY172 VAL173 LYS174 ILE175 THR176 HIS177 GLY178 SER179 TRP180 ALA181 ARG182 MET183 PRO184 PRO185 PRO186 LEU187 VAL188 ASP189 ASP190 GLN191 VAL192 THR193 TYR194 GLU195 ASP196 GLY197 THR198 PRO199 ALA200 THR201 VAL202 ASP203 GLN204 MET205 ALA206 GLN207 ASP208 VAL209 SER210 ALA211 PHE212 LEU213 MET214 TRP215 ALA216 ALA217 GLU218 PRO219 LYS220 LEU221 VAL222 ALA223 ARG224 LYS225 GLN226 MET227 GLY228 LEU229 VAL230 ALA231 MET232 VAL233 MET234 LEU235 GLY236 LEU237 LEU238 SER239 VAL240 MET241 LEU242 TYR243 LEU244 THR245 ASN246 LYS247 ARG248 LEU249 TRP250 ALA251 PRO252 TYR253 LYS254 GLY255 HIS256 LYS257 ALA258
Unit 6 ARG11 ARG12 ASP13 PHE14 LEU15 TYR16 HIS17 ALA18 THR19 ALA20 ALA21 THR22 GLY23 VAL24 VAL25 VAL26 THR27 GLY28 ALA29 ALA30 VAL31 TRP32 PRO33 LEU34 ILE35 ASN36 GLN37 MET38 ASN39 ALA40 SER41 ALA42 ASP43 VAL44 LYS45 ALA46 MET47 ALA48 SER49 ILE50 PHE51 VAL52 ASP53 VAL54 SER55 ALA56 VAL57 GLU58 VAL59 GLY60 THR61 GLN62 LEU63 THR64 VAL65 LYS66 TRP67 ARG68 GLY69 LYS70 PRO71 VAL72 PHE73 ILE74 ARG75 ARG76 ARG77 ASP78 GLU79 LYS80 ASP81 ILE82 GLU83 LEU84 ALA85 ARG86 SER87 VAL88 PRO89 LEU90 GLY91 ALA92 LEU93 ARG94 ASP95 THR96 SER97 ALA98 GLU99 ASN100 ALA101 ASN102 LYS103 PRO104 GLY105 ALA106 GLU107 ALA108 THR109 ASP110 GLU111 ASN112 ARG113 THR114 LEU115 PRO116 ALA117 PHE118 ASP119 GLY120 THR121 ASN122 THR123 GLY124 GLU125 TRP126 LEU127 VAL128 MET129 LEU130 GLY131 VAL132 CYS133 THR134 HIS135 LEU136 GLY137 CYS138 VAL139 PRO140 MET141 GLY142 ASP143 LYS144 SER145 GLY146 ASP147 PHE148 GLY149 GLY150 TRP151 PHE152 CYS153 PRO154 CYS155 HIS156 GLY157 SER158 HIS159 TYR160 ASP161 SER162 ALA163 GLY164 ARG165 ILE166 ARG167 LYS168 GLY169 PRO170 ALA171 PRO172 ARG173 ASN174 LEU175 ASP176 ILE177 PRO178 VAL179 ALA180 ALA181 PHE182 VAL183 ASP184 GLU185 THR186 THR187 ILE188 LYS189 LEU190 GLY191
Ligands
Unit 7 HEM501 HEM502 SMA503
Unit 8 HEC501
Unit 9 FES501
Unit 10 HEM501 HEM502 SMA503
Unit 11 HEC501
Unit 12 FES501
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany