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| Title | CRYSTAL STRUCTURE OF EBA-175 REGION II (RII) CRYSTALLIZED IN PRESENCE OF (ALPHA)2,3-SIALYLLACTOSE | |
| Keywords | EBA-175, RII, DBL, ERYTHROCYTE, INVASION, HOST, MALARIA, DIS GLYCOPHORIN, GLYCAN, SIALIC ACID, SIALYLLACTOSE, CELL INVAS | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 1ZRO | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | ERYTHROCYTE BINDING ANTIGEN REGION II | A | 588 | 4945 | 0 |
| 2 | Protein | ERYTHROCYTE BINDING ANTIGEN REGION II | B | 588 | 4945 | 0 |
| 3 | Ligand | ERYTHROCYTE BINDING ANTIGEN REGION II | A | 10 | 0 | 42 |
| 4 | Ligand | ERYTHROCYTE BINDING ANTIGEN REGION II | B | 10 | 0 | 42 |
| 5 | Water | 599 | 0 | 599 | ||
| total | 1795 | 9890 | 683 |
| Unit 1 | ASN8 GLU9 VAL10 LEU11 SER12 ASN13 CYS14 ARG15 GLU16 LYS17 ARG18 LYS19 GLY20 MET21 LYS22 TRP23 ASP24 CYS25 LYS26 LYS27 LYS28 ASN29 ASP30 ARG31 SER32 ASN33 TYR34 VAL35 CYS36 ILE37 PRO38 ASP39 ARG40 ARG41 ILE42 GLN43 LEU44 CYS45 ILE46 VAL47 ASN48 LEU49 ALA50 ILE51 ILE52 LYS53 THR54 TYR55 THR56 LYS57 GLU58 THR59 MET60 LYS61 ASP62 HIS63 PHE64 ILE65 GLU66 ALA67 SER68 LYS69 LYS70 GLU71 SER72 GLN73 LEU74 LEU75 LEU76 LYS77 LYS78 ASN79 ASP80 ASN81 LYS82 TYR83 ASN84 SER85 LYS86 PHE87 CYS88 ASN89 ASP90 LEU91 LYS92 ASN93 SER94 PHE95 LEU96 ASP97 TYR98 GLY99 HIS100 LEU101 ALA102 MET103 GLY104 ASN105 ASP106 MET107 ASP108 PHE109 GLY110 GLY111 TYR112 SER113 THR114 LYS115 ALA116 GLU117 ASN118 LYS119 ILE120 GLN121 GLU122 VAL123 PHE124 LYS125 GLY126 ALA127 HIS128 GLY129 GLU130 ILE131 SER132 GLU133 HIS134 LYS135 ILE136 LYS137 ASN138 PHE139 ARG140 LYS141 LYS142 TRP143 TRP144 ASN145 GLU146 PHE147 ARG148 GLU149 LYS150 LEU151 TRP152 GLU153 ALA154 MET155 LEU156 SER157 GLU158 HIS159 LYS160 ASN161 ASN162 ILE163 CYS166 LYS167 ASN168 ILE169 PRO170 GLN171 GLU172 GLU173 LEU174 GLN175 ILE176 THR177 GLN178 TRP179 ILE180 LYS181 GLU182 TRP183 HIS184 GLY185 GLU186 PHE187 LEU188 LEU189 GLU190 ARG191 ASP192 ASN193 ARG194 ALA195 LYS196 LEU197 PRO198 LYS199 SER200 LYS201 CYS202 LYS203 ASN204 ASN205 ALA206 LEU207 TYR208 GLU209 ALA210 CYS211 GLU212 LYS213 GLU214 CYS215 ILE216 ASP217 PRO218 CYS219 MET220 LYS221 TYR222 ARG223 ASP224 TRP225 ILE226 ILE227 ARG228 SER229 LYS230 PHE231 GLU232 TRP233 HIS234 THR235 LEU236 SER237 LYS238 GLU239 TYR240 GLU241 THR242 GLN243 LYS244 VAL245 PRO246 LYS247 GLU248 ASN249 ALA250 GLU251 ASN252 TYR253 LEU254 ILE255 LYS256 ILE257 SER258 GLU259 ASN260 LYS261 ASN262 ASP263 ALA264 LYS265 VAL266 SER267 LEU268 LEU269 LEU270 ASN271 ASN272 CYS273 ASP274 ALA275 GLU276 TYR277 SER278 LYS279 TYR280 CYS281 ASP282 CYS283 LYS284 HIS285 THR286 THR287 THR288 LEU289 VAL290 LYS291 SER292 VAL293 LEU294 ASN295 GLY296 ASN297 ASP298 ASN299 THR300 ILE301 LYS302 GLU303 LYS304 ARG305 GLU306 HIS307 ILE308 ASP309 LEU310 ASP311 ASP312 PHE313 SER314 LYS315 PHE316 GLY317 CYS318 ASP319 LYS320 ASN321 SER322 VAL323 ASP324 THR325 ASN326 THR327 LYS328 VAL329 TRP330 GLU331 CYS332 LYS333 LYS334 PRO335 TYR336 LYS337 LEU338 SER339 THR340 LYS341 ASP342 VAL343 CYS344 VAL345 PRO346 PRO347 ARG348 ARG349 GLN350 GLU351 LEU352 CYS353 LEU354 GLY355 ASN356 ILE357 ASP358 ARG359 ILE360 TYR361 ASP362 LYS363 ASN364 LEU365 LEU366 MET367 ILE368 LYS369 GLU370 HIS371 ILE372 LEU373 ALA374 ILE375 ALA376 ILE377 TYR378 GLU379 SER380 ARG381 ILE382 LEU383 LYS384 ARG385 LYS386 TYR387 LYS388 ASN389 LYS390 ASP391 ASP392 LYS393 GLU394 VAL395 CYS396 LYS397 ILE398 ILE399 ASN400 LYS401 THR402 PHE403 ALA404 ASP405 ILE406 ARG407 ASP408 ILE409 ILE410 GLY411 GLY412 THR413 ASP414 TYR415 TRP416 ASN417 ASP418 LEU419 SER420 ASN421 ARG422 LYS423 LEU424 VAL425 GLY426 LYS427 ILE428 ASN429 THR430 ASN431 SER432 ASN433 TYR434 VAL435 HIS436 ARG437 ASN438 LYS439 GLN440 ASN441 ASP442 LYS443 LEU444 PHE445 ARG446 ASP447 GLU448 TRP449 TRP450 LYS451 VAL452 ILE453 LYS454 LYS455 ASP456 VAL457 TRP458 ASN459 VAL460 ILE461 SER462 TRP463 VAL464 PHE465 LYS466 ASP467 LYS468 THR469 VAL470 CYS471 LYS472 GLU473 ASP474 ASP475 ILE476 GLU477 ASN478 ILE479 PRO480 GLN481 PHE482 PHE483 ARG484 TRP485 PHE486 SER487 GLU488 TRP489 GLY490 ASP491 ASP492 TYR493 CYS494 GLN495 ASP496 LYS497 THR498 LYS499 MET500 ILE501 GLU502 THR503 LEU504 LYS505 VAL506 GLU507 CYS508 CYS513 GLU514 ASP515 ASP516 ASN517 CYS518 LYS519 ARG520 LYS521 CYS522 ASN523 SER524 TYR525 LYS526 GLU527 TRP528 ILE529 SER530 LYS531 LYS532 LYS533 GLU534 GLU535 TYR536 ASN537 LYS538 GLN539 ALA540 LYS541 GLN542 TYR543 GLN544 GLU545 TYR546 GLN547 LYS548 GLY549 ASN550 ASN551 TYR552 LYS553 MET554 TYR555 SER556 GLU557 PHE558 LYS559 SER560 ILE561 LYS562 PRO563 GLU564 VAL565 TYR566 LEU567 LYS568 LYS569 TYR570 SER571 GLU572 LYS573 CYS574 SER575 ASN576 LEU577 ASN578 PHE579 GLU580 ASP581 GLU582 PHE583 LYS584 GLU585 GLU586 LEU587 HIS588 SER589 ASP590 TYR591 LYS592 ASN593 LYS594 CYS595 THR596 MET597 CYS598 PRO599 GLU600 VAL601 |
| Unit 2 | ASN8 GLU9 VAL10 LEU11 SER12 ASN13 CYS14 ARG15 GLU16 LYS17 ARG18 LYS19 GLY20 MET21 LYS22 TRP23 ASP24 CYS25 LYS26 LYS27 LYS28 ASN29 ASP30 ARG31 SER32 ASN33 TYR34 VAL35 CYS36 ILE37 PRO38 ASP39 ARG40 ARG41 ILE42 GLN43 LEU44 CYS45 ILE46 VAL47 ASN48 LEU49 ALA50 ILE51 ILE52 LYS53 THR54 TYR55 THR56 LYS57 GLU58 THR59 MET60 LYS61 ASP62 HIS63 PHE64 ILE65 GLU66 ALA67 SER68 LYS69 LYS70 GLU71 SER72 GLN73 LEU74 LEU75 LEU76 LYS77 LYS78 ASN79 ASP80 ASN81 LYS82 TYR83 ASN84 SER85 LYS86 PHE87 CYS88 ASN89 ASP90 LEU91 LYS92 ASN93 SER94 PHE95 LEU96 ASP97 TYR98 GLY99 HIS100 LEU101 ALA102 MET103 GLY104 ASN105 ASP106 MET107 ASP108 PHE109 GLY110 GLY111 TYR112 SER113 THR114 LYS115 ALA116 GLU117 ASN118 LYS119 ILE120 GLN121 GLU122 VAL123 PHE124 LYS125 GLY126 ALA127 HIS128 GLY129 GLU130 ILE131 SER132 GLU133 HIS134 LYS135 ILE136 LYS137 ASN138 PHE139 ARG140 LYS141 LYS142 TRP143 TRP144 ASN145 GLU146 PHE147 ARG148 GLU149 LYS150 LEU151 TRP152 GLU153 ALA154 MET155 LEU156 SER157 GLU158 HIS159 LYS160 ASN161 ASN162 ILE163 CYS166 LYS167 ASN168 ILE169 PRO170 GLN171 GLU172 GLU173 LEU174 GLN175 ILE176 THR177 GLN178 TRP179 ILE180 LYS181 GLU182 TRP183 HIS184 GLY185 GLU186 PHE187 LEU188 LEU189 GLU190 ARG191 ASP192 ASN193 ARG194 ALA195 LYS196 LEU197 PRO198 LYS199 SER200 LYS201 CYS202 LYS203 ASN204 ASN205 ALA206 LEU207 TYR208 GLU209 ALA210 CYS211 GLU212 LYS213 GLU214 CYS215 ILE216 ASP217 PRO218 CYS219 MET220 LYS221 TYR222 ARG223 ASP224 TRP225 ILE226 ILE227 ARG228 SER229 LYS230 PHE231 GLU232 TRP233 HIS234 THR235 LEU236 SER237 LYS238 GLU239 TYR240 GLU241 THR242 GLN243 LYS244 VAL245 PRO246 LYS247 GLU248 ASN249 ALA250 GLU251 ASN252 TYR253 LEU254 ILE255 LYS256 ILE257 SER258 GLU259 ASN260 LYS261 ASN262 ASP263 ALA264 LYS265 VAL266 SER267 LEU268 LEU269 LEU270 ASN271 ASN272 CYS273 ASP274 ALA275 GLU276 TYR277 SER278 LYS279 TYR280 CYS281 ASP282 CYS283 LYS284 HIS285 THR286 THR287 THR288 LEU289 VAL290 LYS291 SER292 VAL293 LEU294 ASN295 GLY296 ASN297 ASP298 ASN299 THR300 ILE301 LYS302 GLU303 LYS304 ARG305 GLU306 HIS307 ILE308 ASP309 LEU310 ASP311 ASP312 PHE313 SER314 LYS315 PHE316 GLY317 CYS318 ASP319 LYS320 ASN321 SER322 VAL323 ASP324 THR325 ASN326 THR327 LYS328 VAL329 TRP330 GLU331 CYS332 LYS333 LYS334 PRO335 TYR336 LYS337 LEU338 SER339 THR340 LYS341 ASP342 VAL343 CYS344 VAL345 PRO346 PRO347 ARG348 ARG349 GLN350 GLU351 LEU352 CYS353 LEU354 GLY355 ASN356 ILE357 ASP358 ARG359 ILE360 TYR361 ASP362 LYS363 ASN364 LEU365 LEU366 MET367 ILE368 LYS369 GLU370 HIS371 ILE372 LEU373 ALA374 ILE375 ALA376 ILE377 TYR378 GLU379 SER380 ARG381 ILE382 LEU383 LYS384 ARG385 LYS386 TYR387 LYS388 ASN389 LYS390 ASP391 ASP392 LYS393 GLU394 VAL395 CYS396 LYS397 ILE398 ILE399 ASN400 LYS401 THR402 PHE403 ALA404 ASP405 ILE406 ARG407 ASP408 ILE409 ILE410 GLY411 GLY412 THR413 ASP414 TYR415 TRP416 ASN417 ASP418 LEU419 SER420 ASN421 ARG422 LYS423 LEU424 VAL425 GLY426 LYS427 ILE428 ASN429 THR430 ASN431 SER432 ASN433 TYR434 VAL435 HIS436 ARG437 ASN438 LYS439 GLN440 ASN441 ASP442 LYS443 LEU444 PHE445 ARG446 ASP447 GLU448 TRP449 TRP450 LYS451 VAL452 ILE453 LYS454 LYS455 ASP456 VAL457 TRP458 ASN459 VAL460 ILE461 SER462 TRP463 VAL464 PHE465 LYS466 ASP467 LYS468 THR469 VAL470 CYS471 LYS472 GLU473 ASP474 ASP475 ILE476 GLU477 ASN478 ILE479 PRO480 GLN481 PHE482 PHE483 ARG484 TRP485 PHE486 SER487 GLU488 TRP489 GLY490 ASP491 ASP492 TYR493 CYS494 GLN495 ASP496 LYS497 THR498 LYS499 MET500 ILE501 GLU502 THR503 LEU504 LYS505 VAL506 GLU507 CYS508 CYS513 GLU514 ASP515 ASP516 ASN517 CYS518 LYS519 ARG520 LYS521 CYS522 ASN523 SER524 TYR525 LYS526 GLU527 TRP528 ILE529 SER530 LYS531 LYS532 LYS533 GLU534 GLU535 TYR536 ASN537 LYS538 GLN539 ALA540 LYS541 GLN542 TYR543 GLN544 GLU545 TYR546 GLN547 LYS548 GLY549 ASN550 ASN551 TYR552 LYS553 MET554 TYR555 SER556 GLU557 PHE558 LYS559 SER560 ILE561 LYS562 PRO563 GLU564 VAL565 TYR566 LEU567 LYS568 LYS569 TYR570 SER571 GLU572 LYS573 CYS574 SER575 ASN576 LEU577 ASN578 PHE579 GLU580 ASP581 GLU582 PHE583 LYS584 GLU585 GLU586 LEU587 HIS588 SER589 ASP590 TYR591 LYS592 ASN593 LYS594 CYS595 THR596 MET597 CYS598 PRO599 GLU600 VAL601 |
| Unit 3 | SO4702 SO4703 SO4704 SO4705 SO4706 SO4707 SO4708 CL709 CL710 SO4711 |
| Unit 4 | SO4701 SO4712 SO4713 SO4714 SO4715 SO4716 SO4717 SO4718 CL719 CL720 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |