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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF FULL-LEGNTH A.FULGIDUS RIO1 SERINE KINA TO ATP AND MN2+ IONS.
Keywords RIO1, RIOK1, SERINE KINASE, PROTEIN KINASE, MANGANESE, RIBOS BIOGENESIS, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1ZP9     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RIO1 KINASE  A 245 1891 80
2  Protein   RIO1 KINASE  B 242 1899 64
3  Protein   RIO1 KINASE  C 241 1850 77
4  Protein   RIO1 KINASE  D 244 1897 77
5  Ligand   RIO1 KINASE  A 2 0 32
6  Ligand   RIO1 KINASE  B 2 0 32
7  Ligand   RIO1 KINASE  C 2 0 32
8  Ligand   RIO1 KINASE  D 2 0 32
9 Water     916 0 916
total       1896 7537 1342

Proteins
Unit 1 ASP3 LEU4 LYS5 LYS6 ILE7 GLU8 SER9 TYR10 LEU11 ASP12 LYS13 LEU14 ARG15 ILE16 LYS17 GLU18 LYS19 ASP20 GLY21 GLU22 GLU23 ARG24 LYS25 ILE26 TYR27 ALA28 GLU29 VAL30 LEU31 ASP32 GLY33 ARG34 THR35 LEU36 LYS37 THR38 LEU39 TYR40 LYS41 LEU42 SER43 ALA44 LYS45 GLY46 TYR47 ILE48 THR49 ALA50 MSE51 GLY52 GLY53 VAL54 ILE55 SER56 THR57 GLY58 LYS59 GLU60 ALA61 ASN62 VAL63 PHE64 TYR65 ALA66 ASP67 GLY68 VAL69 PHE70 ASP71 GLY72 LYS73 PRO74 VAL75 ALA76 MSE77 ALA78 VAL79 LYS80 ILE81 TYR82 ARG83 ILE84 MSE92 ASP93 GLU94 TYR95 LEU96 TYR97 GLY98 ASP99 GLU100 ARG101 PHE102 ASP103 MSE104 PRO109 LYS110 GLU111 LYS112 VAL113 PHE114 ILE115 TRP116 THR117 GLU118 LYS119 GLU120 PHE121 ARG122 ASN123 LEU124 GLU125 ARG126 ALA127 LYS128 GLU129 ALA130 GLY131 VAL132 SER133 VAL134 PRO135 GLN136 PRO137 TYR138 THR139 TYR140 MSE141 LYS142 ASN143 VAL144 LEU145 LEU146 MSE147 GLU148 PHE149 ILE150 GLY151 GLU152 ASP153 GLU154 LEU155 PRO156 ALA157 PRO158 THR159 LEU160 VAL161 GLU162 LEU163 GLY164 ARG165 GLU166 LEU167 LYS168 GLU169 LEU170 ASP171 VAL172 GLU173 GLY174 ILE175 PHE176 ASN177 ASP178 VAL179 VAL180 GLU181 ASN182 VAL183 LYS184 ARG185 LEU186 TYR187 GLN188 GLU189 ALA190 GLU191 LEU192 VAL193 HIS194 ALA195 ASP196 LEU197 SER198 GLU199 TYR200 ASN201 ILE202 MSE203 TYR204 ILE205 ASP206 LYS207 VAL208 TYR209 PHE210 ILE211 ASP212 MSE213 GLY214 GLN215 ALA216 VAL217 THR218 LEU219 ARG220 HIS221 PRO222 MSE223 ALA224 GLU225 SER226 TYR227 LEU228 GLU229 ARG230 ASP231 VAL232 ARG233 ASN234 ILE235 ILE236 ARG237 PHE238 PHE239 SER240 LYS241 TYR242 GLY243 VAL244 LYS245 ALA246 ASP247 PHE248 GLU249 GLU250 MSE251 LEU252 LYS253 GLU254 VAL255 LYS256 GLY257 GLU258
Unit 2 LYS2 ASP3 LEU4 LYS5 LYS6 ILE7 GLU8 SER9 TYR10 LEU11 ASP12 LYS13 LEU14 ARG15 ILE16 LYS17 GLU18 LYS19 ASP20 GLY21 GLU22 GLU23 ARG24 LYS25 ILE26 TYR27 ALA28 GLU29 VAL30 LEU31 ASP32 GLY33 ARG34 THR35 LEU36 LYS37 THR38 LEU39 TYR40 LYS41 LEU42 SER43 ALA44 LYS45 GLY46 TYR47 ILE48 THR49 ALA50 MSE51 GLY52 GLY53 VAL54 ILE55 SER56 THR57 GLY58 LYS59 GLU60 ALA61 ASN62 VAL63 PHE64 TYR65 ALA66 ASP67 GLY68 VAL69 PHE70 ASP71 GLY72 LYS73 PRO74 VAL75 ALA76 MSE77 ALA78 VAL79 LYS80 ILE81 TYR82 ARG83 ILE84 ASP93 GLU94 TYR95 LEU96 TYR97 GLY98 ASP99 GLU100 ARG101 PHE102 LYS110 GLU111 LYS112 VAL113 PHE114 ILE115 TRP116 THR117 GLU118 LYS119 GLU120 PHE121 ARG122 ASN123 LEU124 GLU125 ARG126 ALA127 LYS128 GLU129 ALA130 GLY131 VAL132 SER133 VAL134 PRO135 GLN136 PRO137 TYR138 THR139 TYR140 MSE141 LYS142 ASN143 VAL144 LEU145 LEU146 MSE147 GLU148 PHE149 ILE150 GLY151 GLU152 ASP153 GLU154 LEU155 PRO156 ALA157 PRO158 THR159 LEU160 VAL161 GLU162 LEU163 GLY164 ARG165 GLU166 LEU167 LYS168 GLU169 LEU170 ASP171 VAL172 GLU173 GLY174 ILE175 PHE176 ASN177 ASP178 VAL179 VAL180 GLU181 ASN182 VAL183 LYS184 ARG185 LEU186 TYR187 GLN188 GLU189 ALA190 GLU191 LEU192 VAL193 HIS194 ALA195 ASP196 LEU197 SER198 GLU199 TYR200 ASN201 ILE202 MSE203 TYR204 ILE205 ASP206 LYS207 VAL208 TYR209 PHE210 ILE211 ASP212 MSE213 GLY214 GLN215 ALA216 VAL217 THR218 LEU219 ARG220 HIS221 PRO222 MSE223 ALA224 GLU225 SER226 TYR227 LEU228 GLU229 ARG230 ASP231 VAL232 ARG233 ASN234 ILE235 ILE236 ARG237 PHE238 PHE239 SER240 LYS241 TYR242 GLY243 VAL244 LYS245 ALA246 ASP247 PHE248 GLU249 GLU250 MSE251 LEU252 LYS253 GLU254 VAL255 LYS256 GLY257 GLU258
Unit 3 MSE1 LYS2 ASP3 LEU4 LYS5 LYS6 ILE7 GLU8 SER9 TYR10 LEU11 ASP12 LYS13 LEU14 ARG15 ILE16 LYS17 GLU18 LYS19 ASP20 GLY21 GLU22 GLU23 ARG24 LYS25 ILE26 TYR27 ALA28 GLU29 VAL30 LEU31 ASP32 GLY33 ARG34 THR35 LEU36 LYS37 THR38 LEU39 TYR40 LYS41 LEU42 SER43 ALA44 LYS45 GLY46 TYR47 ILE48 THR49 ALA50 MSE51 GLY52 GLY53 VAL54 ILE55 SER56 THR57 GLY58 LYS59 GLU60 ALA61 ASN62 VAL63 PHE64 TYR65 ALA66 ASP67 GLY68 VAL69 PHE70 ASP71 GLY72 LYS73 PRO74 VAL75 ALA76 MSE77 ALA78 VAL79 LYS80 ILE81 TYR82 ARG83 ILE84 MSE92 ASP93 GLU94 TYR95 LEU96 TYR97 GLY98 ASP99 LYS110 GLU111 LYS112 VAL113 PHE114 ILE115 TRP116 THR117 GLU118 LYS119 GLU120 PHE121 ARG122 ASN123 LEU124 GLU125 ARG126 ALA127 LYS128 GLU129 ALA130 GLY131 VAL132 SER133 VAL134 PRO135 GLN136 PRO137 TYR138 THR139 TYR140 MSE141 LYS142 ASN143 VAL144 LEU145 LEU146 MSE147 GLU148 PHE149 ILE150 GLY151 GLU152 ASP153 GLU154 LEU155 PRO156 ALA157 PRO158 THR159 LEU160 VAL161 GLU162 LEU163 GLY164 ARG165 GLU166 LEU167 LYS168 GLU169 LEU170 ASP171 VAL172 GLU173 GLY174 ILE175 PHE176 ASN177 ASP178 VAL179 VAL180 GLU181 ASN182 VAL183 LYS184 ARG185 LEU186 TYR187 GLN188 GLU189 ALA190 GLU191 LEU192 VAL193 HIS194 ALA195 ASP196 LEU197 SER198 GLU199 TYR200 ASN201 ILE202 MSE203 TYR204 ILE205 ASP206 LYS207 VAL208 TYR209 PHE210 ILE211 ASP212 MSE213 GLY214 GLN215 ALA216 VAL217 THR218 LEU219 ARG220 HIS221 PRO222 MSE223 ALA224 GLU225 SER226 TYR227 LEU228 GLU229 ARG230 ASP231 VAL232 ARG233 ASN234 ILE235 ILE236 ARG237 PHE238 PHE239 SER240 LYS241 TYR242 GLY243 VAL244 LYS245 ALA246 ASP247 PHE248 GLU249 GLU250 MSE251 LEU252 LYS253 GLU254 VAL255 LYS256 GLY257 GLU258
Unit 4 MSE1 LYS2 ASP3 LEU4 LYS5 LYS6 ILE7 GLU8 SER9 TYR10 LEU11 ASP12 LYS13 LEU14 ARG15 ILE16 LYS17 GLU18 LYS19 ASP20 GLY21 GLU22 GLU23 ARG24 LYS25 ILE26 TYR27 ALA28 GLU29 VAL30 LEU31 ASP32 GLY33 ARG34 THR35 LEU36 LYS37 THR38 LEU39 TYR40 LYS41 LEU42 SER43 ALA44 LYS45 GLY46 TYR47 ILE48 THR49 ALA50 MSE51 GLY52 GLY53 VAL54 ILE55 SER56 THR57 GLY58 LYS59 GLU60 ALA61 ASN62 VAL63 PHE64 TYR65 ALA66 ASP67 GLY68 VAL69 PHE70 ASP71 GLY72 LYS73 PRO74 VAL75 ALA76 MSE77 ALA78 VAL79 LYS80 ILE81 TYR82 ARG83 ILE84 MSE92 ASP93 GLU94 TYR95 LEU96 TYR97 GLY98 ASP99 GLU100 ARG101 PHE102 ASP103 LYS110 GLU111 LYS112 VAL113 PHE114 ILE115 TRP116 THR117 GLU118 LYS119 GLU120 PHE121 ARG122 ASN123 LEU124 GLU125 ARG126 ALA127 LYS128 GLU129 ALA130 GLY131 VAL132 SER133 VAL134 PRO135 GLN136 PRO137 TYR138 THR139 TYR140 MSE141 LYS142 ASN143 VAL144 LEU145 LEU146 MSE147 GLU148 PHE149 ILE150 GLY151 GLU152 ASP153 GLU154 LEU155 PRO156 ALA157 PRO158 THR159 LEU160 VAL161 GLU162 LEU163 GLY164 ARG165 GLU166 LEU167 LYS168 GLU169 LEU170 ASP171 VAL172 GLU173 GLY174 ILE175 PHE176 ASN177 ASP178 VAL179 VAL180 GLU181 ASN182 VAL183 LYS184 ARG185 LEU186 TYR187 GLN188 GLU189 ALA190 GLU191 LEU192 VAL193 HIS194 ALA195 ASP196 LEU197 SER198 GLU199 TYR200 ASN201 ILE202 MSE203 TYR204 ILE205 ASP206 LYS207 VAL208 TYR209 PHE210 ILE211 ASP212 MSE213 GLY214 GLN215 ALA216 VAL217 THR218 LEU219 ARG220 HIS221 PRO222 MSE223 ALA224 GLU225 SER226 TYR227 LEU228 GLU229 ARG230 ASP231 VAL232 ARG233 ASN234 ILE235 ILE236 ARG237 PHE238 PHE239 SER240 LYS241 TYR242 GLY243 VAL244 LYS245 ALA246 ASP247 PHE248 GLU249 GLU250 MSE251 LEU252 LYS253 GLU254 VAL255 LYS256 GLY257

Ligands
Unit 5 MN259 ATP260
Unit 6 MN259 ATP260
Unit 7 MN259 ATP260
Unit 8 MN259 ATP260

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany