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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF ALKYL HYDROPEROXIDE-REDUCTASE (AHPC) FR HELICOBACTER PYLORI
Keywords DECAMER, TOROIDE-SHAPED COMPLEX, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1ZOF     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ALKYL HYDROPEROXIDE-REDUCTASE  A 170 1349 0
2  Protein   ALKYL HYDROPEROXIDE-REDUCTASE  B 175 1392 0
3  Protein   ALKYL HYDROPEROXIDE-REDUCTASE  C 170 1349 0
4  Protein   ALKYL HYDROPEROXIDE-REDUCTASE  D 175 1392 0
5  Protein   ALKYL HYDROPEROXIDE-REDUCTASE  E 170 1349 0
6  Protein   ALKYL HYDROPEROXIDE-REDUCTASE  F 175 1392 0
7  Protein   ALKYL HYDROPEROXIDE-REDUCTASE  G 170 1349 0
8  Protein   ALKYL HYDROPEROXIDE-REDUCTASE  H 175 1392 0
9  Protein   ALKYL HYDROPEROXIDE-REDUCTASE  I 170 1349 0
10  Protein   ALKYL HYDROPEROXIDE-REDUCTASE  J 175 1392 0
11 Water     65 0 65
total       1790 13705 65

Proteins
Unit 1 MET1 VAL2 VAL3 THR4 LYS5 LEU6 ALA7 PRO8 ASP9 PHE10 LYS11 ALA12 PRO13 ALA14 VAL15 LEU16 GLY17 ASN18 ASN19 GLU20 VAL21 ASP22 GLU23 HIS24 PHE25 GLU26 LEU27 SER28 LYS29 ASN30 LEU31 GLY32 LYS33 ASN34 GLY35 VAL36 ILE37 LEU38 PHE39 PHE40 TRP41 PRO42 LYS43 ASP44 PHE45 THR46 PHE47 VAL48 CYS49 PRO50 THR51 GLU52 ILE53 ILE54 ALA55 PHE56 ASP57 LYS58 ARG59 VAL60 LYS61 ASP62 PHE63 HIS64 GLU65 LYS66 GLY67 PHE68 ASN69 VAL70 ILE71 GLY72 VAL73 SER74 ILE75 ASP76 SER77 GLU78 GLN79 VAL80 HIS81 PHE82 ALA83 TRP84 LYS85 ASN86 THR87 PRO88 VAL89 GLU90 LYS91 GLY92 GLY93 ILE94 GLY95 GLN96 VAL97 SER98 PHE99 PRO100 MET101 VAL102 ALA103 ASP104 ILE105 THR106 LYS107 SER108 ILE109 SER110 ARG111 ASP112 TYR113 ASP114 VAL115 LEU116 PHE117 GLU118 GLU119 ALA120 ILE121 ALA122 LEU123 ARG124 GLY125 ALA126 PHE127 LEU128 ILE129 ASP130 LYS131 ASN132 MET133 LYS134 VAL135 ARG136 HIS137 ALA138 VAL139 ILE140 ASN141 ASP142 LEU143 PRO144 LEU145 GLY146 ARG147 ASN148 ALA149 ASP150 GLU151 MET152 LEU153 ARG154 MET155 VAL156 ASP157 ALA158 LEU159 LEU160 HIS161 PHE162 GLU163 GLU164 HIS165 GLY166 GLU167 VAL168 CYS169 PRO170
Unit 2 MET1 VAL2 VAL3 THR4 LYS5 LEU6 ALA7 PRO8 ASP9 PHE10 LYS11 ALA12 PRO13 ALA14 VAL15 LEU16 GLY17 ASN18 ASN19 GLU20 VAL21 ASP22 GLU23 HIS24 PHE25 GLU26 LEU27 SER28 LYS29 ASN30 LEU31 GLY32 LYS33 ASN34 GLY35 VAL36 ILE37 LEU38 PHE39 PHE40 TRP41 PRO42 LYS43 ASP44 PHE45 THR46 PHE47 VAL48 CYS49 PRO50 THR51 GLU52 ILE53 ILE54 ALA55 PHE56 ASP57 LYS58 ARG59 VAL60 LYS61 ASP62 PHE63 HIS64 GLU65 LYS66 GLY67 PHE68 ASN69 VAL70 ILE71 GLY72 VAL73 SER74 ILE75 ASP76 SER77 GLU78 GLN79 VAL80 HIS81 PHE82 ALA83 TRP84 LYS85 ASN86 THR87 PRO88 VAL89 GLU90 LYS91 GLY92 GLY93 ILE94 GLY95 GLN96 VAL97 SER98 PHE99 PRO100 MET101 VAL102 ALA103 ASP104 ILE105 THR106 LYS107 SER108 ILE109 SER110 ARG111 ASP112 TYR113 ASP114 VAL115 LEU116 PHE117 GLU118 GLU119 ALA120 ILE121 ALA122 LEU123 ARG124 GLY125 ALA126 PHE127 LEU128 ILE129 ASP130 LYS131 ASN132 MET133 LYS134 VAL135 ARG136 HIS137 ALA138 VAL139 ILE140 ASN141 ASP142 LEU143 PRO144 LEU145 GLY146 ARG147 ASN148 ALA149 ASP150 GLU151 MET152 LEU153 ARG154 MET155 VAL156 ASP157 ALA158 LEU159 LEU160 HIS161 PHE162 GLU163 GLU164 HIS165 GLY166 GLU167 VAL168 CYS169 PRO170 ALA171 GLY172 TRP173 ARG174 LYS175
Unit 3 MET1 VAL2 VAL3 THR4 LYS5 LEU6 ALA7 PRO8 ASP9 PHE10 LYS11 ALA12 PRO13 ALA14 VAL15 LEU16 GLY17 ASN18 ASN19 GLU20 VAL21 ASP22 GLU23 HIS24 PHE25 GLU26 LEU27 SER28 LYS29 ASN30 LEU31 GLY32 LYS33 ASN34 GLY35 VAL36 ILE37 LEU38 PHE39 PHE40 TRP41 PRO42 LYS43 ASP44 PHE45 THR46 PHE47 VAL48 CYS49 PRO50 THR51 GLU52 ILE53 ILE54 ALA55 PHE56 ASP57 LYS58 ARG59 VAL60 LYS61 ASP62 PHE63 HIS64 GLU65 LYS66 GLY67 PHE68 ASN69 VAL70 ILE71 GLY72 VAL73 SER74 ILE75 ASP76 SER77 GLU78 GLN79 VAL80 HIS81 PHE82 ALA83 TRP84 LYS85 ASN86 THR87 PRO88 VAL89 GLU90 LYS91 GLY92 GLY93 ILE94 GLY95 GLN96 VAL97 SER98 PHE99 PRO100 MET101 VAL102 ALA103 ASP104 ILE105 THR106 LYS107 SER108 ILE109 SER110 ARG111 ASP112 TYR113 ASP114 VAL115 LEU116 PHE117 GLU118 GLU119 ALA120 ILE121 ALA122 LEU123 ARG124 GLY125 ALA126 PHE127 LEU128 ILE129 ASP130 LYS131 ASN132 MET133 LYS134 VAL135 ARG136 HIS137 ALA138 VAL139 ILE140 ASN141 ASP142 LEU143 PRO144 LEU145 GLY146 ARG147 ASN148 ALA149 ASP150 GLU151 MET152 LEU153 ARG154 MET155 VAL156 ASP157 ALA158 LEU159 LEU160 HIS161 PHE162 GLU163 GLU164 HIS165 GLY166 GLU167 VAL168 CYS169 PRO170
Unit 4 MET1 VAL2 VAL3 THR4 LYS5 LEU6 ALA7 PRO8 ASP9 PHE10 LYS11 ALA12 PRO13 ALA14 VAL15 LEU16 GLY17 ASN18 ASN19 GLU20 VAL21 ASP22 GLU23 HIS24 PHE25 GLU26 LEU27 SER28 LYS29 ASN30 LEU31 GLY32 LYS33 ASN34 GLY35 VAL36 ILE37 LEU38 PHE39 PHE40 TRP41 PRO42 LYS43 ASP44 PHE45 THR46 PHE47 VAL48 CYS49 PRO50 THR51 GLU52 ILE53 ILE54 ALA55 PHE56 ASP57 LYS58 ARG59 VAL60 LYS61 ASP62 PHE63 HIS64 GLU65 LYS66 GLY67 PHE68 ASN69 VAL70 ILE71 GLY72 VAL73 SER74 ILE75 ASP76 SER77 GLU78 GLN79 VAL80 HIS81 PHE82 ALA83 TRP84 LYS85 ASN86 THR87 PRO88 VAL89 GLU90 LYS91 GLY92 GLY93 ILE94 GLY95 GLN96 VAL97 SER98 PHE99 PRO100 MET101 VAL102 ALA103 ASP104 ILE105 THR106 LYS107 SER108 ILE109 SER110 ARG111 ASP112 TYR113 ASP114 VAL115 LEU116 PHE117 GLU118 GLU119 ALA120 ILE121 ALA122 LEU123 ARG124 GLY125 ALA126 PHE127 LEU128 ILE129 ASP130 LYS131 ASN132 MET133 LYS134 VAL135 ARG136 HIS137 ALA138 VAL139 ILE140 ASN141 ASP142 LEU143 PRO144 LEU145 GLY146 ARG147 ASN148 ALA149 ASP150 GLU151 MET152 LEU153 ARG154 MET155 VAL156 ASP157 ALA158 LEU159 LEU160 HIS161 PHE162 GLU163 GLU164 HIS165 GLY166 GLU167 VAL168 CYS169 PRO170 ALA171 GLY172 TRP173 ARG174 LYS175
Unit 5 MET1 VAL2 VAL3 THR4 LYS5 LEU6 ALA7 PRO8 ASP9 PHE10 LYS11 ALA12 PRO13 ALA14 VAL15 LEU16 GLY17 ASN18 ASN19 GLU20 VAL21 ASP22 GLU23 HIS24 PHE25 GLU26 LEU27 SER28 LYS29 ASN30 LEU31 GLY32 LYS33 ASN34 GLY35 VAL36 ILE37 LEU38 PHE39 PHE40 TRP41 PRO42 LYS43 ASP44 PHE45 THR46 PHE47 VAL48 CYS49 PRO50 THR51 GLU52 ILE53 ILE54 ALA55 PHE56 ASP57 LYS58 ARG59 VAL60 LYS61 ASP62 PHE63 HIS64 GLU65 LYS66 GLY67 PHE68 ASN69 VAL70 ILE71 GLY72 VAL73 SER74 ILE75 ASP76 SER77 GLU78 GLN79 VAL80 HIS81 PHE82 ALA83 TRP84 LYS85 ASN86 THR87 PRO88 VAL89 GLU90 LYS91 GLY92 GLY93 ILE94 GLY95 GLN96 VAL97 SER98 PHE99 PRO100 MET101 VAL102 ALA103 ASP104 ILE105 THR106 LYS107 SER108 ILE109 SER110 ARG111 ASP112 TYR113 ASP114 VAL115 LEU116 PHE117 GLU118 GLU119 ALA120 ILE121 ALA122 LEU123 ARG124 GLY125 ALA126 PHE127 LEU128 ILE129 ASP130 LYS131 ASN132 MET133 LYS134 VAL135 ARG136 HIS137 ALA138 VAL139 ILE140 ASN141 ASP142 LEU143 PRO144 LEU145 GLY146 ARG147 ASN148 ALA149 ASP150 GLU151 MET152 LEU153 ARG154 MET155 VAL156 ASP157 ALA158 LEU159 LEU160 HIS161 PHE162 GLU163 GLU164 HIS165 GLY166 GLU167 VAL168 CYS169 PRO170
Unit 6 MET1 VAL2 VAL3 THR4 LYS5 LEU6 ALA7 PRO8 ASP9 PHE10 LYS11 ALA12 PRO13 ALA14 VAL15 LEU16 GLY17 ASN18 ASN19 GLU20 VAL21 ASP22 GLU23 HIS24 PHE25 GLU26 LEU27 SER28 LYS29 ASN30 LEU31 GLY32 LYS33 ASN34 GLY35 VAL36 ILE37 LEU38 PHE39 PHE40 TRP41 PRO42 LYS43 ASP44 PHE45 THR46 PHE47 VAL48 CYS49 PRO50 THR51 GLU52 ILE53 ILE54 ALA55 PHE56 ASP57 LYS58 ARG59 VAL60 LYS61 ASP62 PHE63 HIS64 GLU65 LYS66 GLY67 PHE68 ASN69 VAL70 ILE71 GLY72 VAL73 SER74 ILE75 ASP76 SER77 GLU78 GLN79 VAL80 HIS81 PHE82 ALA83 TRP84 LYS85 ASN86 THR87 PRO88 VAL89 GLU90 LYS91 GLY92 GLY93 ILE94 GLY95 GLN96 VAL97 SER98 PHE99 PRO100 MET101 VAL102 ALA103 ASP104 ILE105 THR106 LYS107 SER108 ILE109 SER110 ARG111 ASP112 TYR113 ASP114 VAL115 LEU116 PHE117 GLU118 GLU119 ALA120 ILE121 ALA122 LEU123 ARG124 GLY125 ALA126 PHE127 LEU128 ILE129 ASP130 LYS131 ASN132 MET133 LYS134 VAL135 ARG136 HIS137 ALA138 VAL139 ILE140 ASN141 ASP142 LEU143 PRO144 LEU145 GLY146 ARG147 ASN148 ALA149 ASP150 GLU151 MET152 LEU153 ARG154 MET155 VAL156 ASP157 ALA158 LEU159 LEU160 HIS161 PHE162 GLU163 GLU164 HIS165 GLY166 GLU167 VAL168 CYS169 PRO170 ALA171 GLY172 TRP173 ARG174 LYS175
Unit 7 MET1 VAL2 VAL3 THR4 LYS5 LEU6 ALA7 PRO8 ASP9 PHE10 LYS11 ALA12 PRO13 ALA14 VAL15 LEU16 GLY17 ASN18 ASN19 GLU20 VAL21 ASP22 GLU23 HIS24 PHE25 GLU26 LEU27 SER28 LYS29 ASN30 LEU31 GLY32 LYS33 ASN34 GLY35 VAL36 ILE37 LEU38 PHE39 PHE40 TRP41 PRO42 LYS43 ASP44 PHE45 THR46 PHE47 VAL48 CYS49 PRO50 THR51 GLU52 ILE53 ILE54 ALA55 PHE56 ASP57 LYS58 ARG59 VAL60 LYS61 ASP62 PHE63 HIS64 GLU65 LYS66 GLY67 PHE68 ASN69 VAL70 ILE71 GLY72 VAL73 SER74 ILE75 ASP76 SER77 GLU78 GLN79 VAL80 HIS81 PHE82 ALA83 TRP84 LYS85 ASN86 THR87 PRO88 VAL89 GLU90 LYS91 GLY92 GLY93 ILE94 GLY95 GLN96 VAL97 SER98 PHE99 PRO100 MET101 VAL102 ALA103 ASP104 ILE105 THR106 LYS107 SER108 ILE109 SER110 ARG111 ASP112 TYR113 ASP114 VAL115 LEU116 PHE117 GLU118 GLU119 ALA120 ILE121 ALA122 LEU123 ARG124 GLY125 ALA126 PHE127 LEU128 ILE129 ASP130 LYS131 ASN132 MET133 LYS134 VAL135 ARG136 HIS137 ALA138 VAL139 ILE140 ASN141 ASP142 LEU143 PRO144 LEU145 GLY146 ARG147 ASN148 ALA149 ASP150 GLU151 MET152 LEU153 ARG154 MET155 VAL156 ASP157 ALA158 LEU159 LEU160 HIS161 PHE162 GLU163 GLU164 HIS165 GLY166 GLU167 VAL168 CYS169 PRO170
Unit 8 MET1 VAL2 VAL3 THR4 LYS5 LEU6 ALA7 PRO8 ASP9 PHE10 LYS11 ALA12 PRO13 ALA14 VAL15 LEU16 GLY17 ASN18 ASN19 GLU20 VAL21 ASP22 GLU23 HIS24 PHE25 GLU26 LEU27 SER28 LYS29 ASN30 LEU31 GLY32 LYS33 ASN34 GLY35 VAL36 ILE37 LEU38 PHE39 PHE40 TRP41 PRO42 LYS43 ASP44 PHE45 THR46 PHE47 VAL48 CYS49 PRO50 THR51 GLU52 ILE53 ILE54 ALA55 PHE56 ASP57 LYS58 ARG59 VAL60 LYS61 ASP62 PHE63 HIS64 GLU65 LYS66 GLY67 PHE68 ASN69 VAL70 ILE71 GLY72 VAL73 SER74 ILE75 ASP76 SER77 GLU78 GLN79 VAL80 HIS81 PHE82 ALA83 TRP84 LYS85 ASN86 THR87 PRO88 VAL89 GLU90 LYS91 GLY92 GLY93 ILE94 GLY95 GLN96 VAL97 SER98 PHE99 PRO100 MET101 VAL102 ALA103 ASP104 ILE105 THR106 LYS107 SER108 ILE109 SER110 ARG111 ASP112 TYR113 ASP114 VAL115 LEU116 PHE117 GLU118 GLU119 ALA120 ILE121 ALA122 LEU123 ARG124 GLY125 ALA126 PHE127 LEU128 ILE129 ASP130 LYS131 ASN132 MET133 LYS134 VAL135 ARG136 HIS137 ALA138 VAL139 ILE140 ASN141 ASP142 LEU143 PRO144 LEU145 GLY146 ARG147 ASN148 ALA149 ASP150 GLU151 MET152 LEU153 ARG154 MET155 VAL156 ASP157 ALA158 LEU159 LEU160 HIS161 PHE162 GLU163 GLU164 HIS165 GLY166 GLU167 VAL168 CYS169 PRO170 ALA171 GLY172 TRP173 ARG174 LYS175
Unit 9 MET1 VAL2 VAL3 THR4 LYS5 LEU6 ALA7 PRO8 ASP9 PHE10 LYS11 ALA12 PRO13 ALA14 VAL15 LEU16 GLY17 ASN18 ASN19 GLU20 VAL21 ASP22 GLU23 HIS24 PHE25 GLU26 LEU27 SER28 LYS29 ASN30 LEU31 GLY32 LYS33 ASN34 GLY35 VAL36 ILE37 LEU38 PHE39 PHE40 TRP41 PRO42 LYS43 ASP44 PHE45 THR46 PHE47 VAL48 CYS49 PRO50 THR51 GLU52 ILE53 ILE54 ALA55 PHE56 ASP57 LYS58 ARG59 VAL60 LYS61 ASP62 PHE63 HIS64 GLU65 LYS66 GLY67 PHE68 ASN69 VAL70 ILE71 GLY72 VAL73 SER74 ILE75 ASP76 SER77 GLU78 GLN79 VAL80 HIS81 PHE82 ALA83 TRP84 LYS85 ASN86 THR87 PRO88 VAL89 GLU90 LYS91 GLY92 GLY93 ILE94 GLY95 GLN96 VAL97 SER98 PHE99 PRO100 MET101 VAL102 ALA103 ASP104 ILE105 THR106 LYS107 SER108 ILE109 SER110 ARG111 ASP112 TYR113 ASP114 VAL115 LEU116 PHE117 GLU118 GLU119 ALA120 ILE121 ALA122 LEU123 ARG124 GLY125 ALA126 PHE127 LEU128 ILE129 ASP130 LYS131 ASN132 MET133 LYS134 VAL135 ARG136 HIS137 ALA138 VAL139 ILE140 ASN141 ASP142 LEU143 PRO144 LEU145 GLY146 ARG147 ASN148 ALA149 ASP150 GLU151 MET152 LEU153 ARG154 MET155 VAL156 ASP157 ALA158 LEU159 LEU160 HIS161 PHE162 GLU163 GLU164 HIS165 GLY166 GLU167 VAL168 CYS169 PRO170
Unit 10 MET1 VAL2 VAL3 THR4 LYS5 LEU6 ALA7 PRO8 ASP9 PHE10 LYS11 ALA12 PRO13 ALA14 VAL15 LEU16 GLY17 ASN18 ASN19 GLU20 VAL21 ASP22 GLU23 HIS24 PHE25 GLU26 LEU27 SER28 LYS29 ASN30 LEU31 GLY32 LYS33 ASN34 GLY35 VAL36 ILE37 LEU38 PHE39 PHE40 TRP41 PRO42 LYS43 ASP44 PHE45 THR46 PHE47 VAL48 CYS49 PRO50 THR51 GLU52 ILE53 ILE54 ALA55 PHE56 ASP57 LYS58 ARG59 VAL60 LYS61 ASP62 PHE63 HIS64 GLU65 LYS66 GLY67 PHE68 ASN69 VAL70 ILE71 GLY72 VAL73 SER74 ILE75 ASP76 SER77 GLU78 GLN79 VAL80 HIS81 PHE82 ALA83 TRP84 LYS85 ASN86 THR87 PRO88 VAL89 GLU90 LYS91 GLY92 GLY93 ILE94 GLY95 GLN96 VAL97 SER98 PHE99 PRO100 MET101 VAL102 ALA103 ASP104 ILE105 THR106 LYS107 SER108 ILE109 SER110 ARG111 ASP112 TYR113 ASP114 VAL115 LEU116 PHE117 GLU118 GLU119 ALA120 ILE121 ALA122 LEU123 ARG124 GLY125 ALA126 PHE127 LEU128 ILE129 ASP130 LYS131 ASN132 MET133 LYS134 VAL135 ARG136 HIS137 ALA138 VAL139 ILE140 ASN141 ASP142 LEU143 PRO144 LEU145 GLY146 ARG147 ASN148 ALA149 ASP150 GLU151 MET152 LEU153 ARG154 MET155 VAL156 ASP157 ALA158 LEU159 LEU160 HIS161 PHE162 GLU163 GLU164 HIS165 GLY166 GLU167 VAL168 CYS169 PRO170 ALA171 GLY172 TRP173 ARG174 LYS175

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany