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Sequence, Chains, Asymmetric and Biological Units

Title THE P-SITE AND P/E-SITE TRNA STRUCTURES FITTED TO P/I SITE C
Keywords E. COLI, RIBOSOME, INITIATION OF PROTEIN SYNTHESIS, INITIATI FACTOR, CRYO-ELETRON MICROSCOPY, RNA
Experiment ELECTRON MICROSCOPY
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1ZO3     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 76 1625 0
2  RNA    B 76 1625 0
total       152 3250 0

Nucleic acids
Unit 1 G1 C2 G3 G4 A5 U6 U7 U8 A9 G10 C11 U12 C13 A14 G15 U16 U17 G18 G19 G20 A21 G22 A23 G24 C25 G26 C27 C28 A29 G30 A31 C32 U33 G34 A35 A36 G37 A38 U39 C40 U41 G42 G43 A44 G45 G46 U47 C48 C49 U50 G51 U52 G53 U54 U55 C56 G57 A58 U59 C60 C61 A62 C63 A64 G65 A66 A67 U68 U69 C70 G71 C72 A73 C74 C75 A76
Unit 2 G1 C2 G3 G4 A5 U6 U7 U8 A9 G10 C11 U12 C13 A14 G15 U16 U17 G18 G19 G20 A21 G22 A23 G24 C25 G26 C27 C28 A29 G30 A31 C32 U33 G34 A35 A36 G37 A38 U39 C40 U41 G42 G43 A44 G45 G46 U47 C48 C49 U50 G51 U52 G53 U54 U55 C56 G57 A58 U59 C60 C61 A62 C63 A64 G65 A66 A67 U68 U69 C70 G71 C72 A73 C74 C75 A76

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany