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Sequence, Chains, Asymmetric and Biological Units

Title COORDINATES OF RRF FITTED INTO CRYO-EM MAP OF THE 70S POST-T COMPLEX
Keywords RIBOSOME RECYCLING FACTOR, ELONGATION FACTOR G, 70S, POST-TE COMPLEX, BIOSYNTHETIC-STRUCTURAL PROTEIN-RNA COMPLEX
Experiment ELECTRON MICROSCOPY
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1ZN1     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  DNA    B 59 59 0
2  DNA    C 40 40 0
3  Protein   RIBOSOME RECYCLING FACTOR  A 185 185 0
4  Protein   30S RIBOSOMAL PROTEIN S12  L 97 97 0
total       381 381 0

Proteins
Unit 3 MET1 ILE2 SER3 ASP4 ILE5 ARG6 LYS7 ASP8 ALA9 GLU10 VAL11 ARG12 MET13 ASP14 LYS15 CYS16 VAL17 GLU18 ALA19 PHE20 LYS21 THR22 GLN23 ILE24 SER25 LYS26 ILE27 ARG28 THR29 GLY30 ARG31 ALA32 SER33 PRO34 SER35 LEU36 LEU37 ASP38 GLY39 ILE40 VAL41 VAL42 GLU43 TYR44 TYR45 GLY46 THR47 PRO48 THR49 PRO50 LEU51 ARG52 GLN53 LEU54 ALA55 SER56 VAL57 THR58 VAL59 GLU60 ASP61 SER62 ARG63 THR64 LEU65 LYS66 ILE67 ASN68 VAL69 PHE70 ASP71 ARG72 SER73 MET74 SER75 PRO76 ALA77 VAL78 GLU79 LYS80 ALA81 ILE82 MET83 ALA84 SER85 ASP86 LEU87 GLY88 LEU89 ASN90 PRO91 ASN92 SER93 ALA94 GLY95 SER96 ASP97 ILE98 ARG99 VAL100 PRO101 LEU102 PRO103 PRO104 LEU105 THR106 GLU107 GLU108 ARG109 ARG110 LYS111 ASP112 LEU113 THR114 LYS115 ILE116 VAL117 ARG118 GLY119 GLU120 ALA121 GLU122 GLN123 ALA124 ARG125 VAL126 ALA127 VAL128 ARG129 ASN130 VAL131 ARG132 ARG133 ASP134 ALA135 ASN136 ASP137 LYS138 VAL139 LYS140 ALA141 LEU142 LEU143 LYS144 ASP145 LYS146 GLU147 ILE148 SER149 GLU150 ASP151 ASP152 ASP153 ARG154 ARG155 SER156 GLN157 ASP158 ASP159 VAL160 GLN161 LYS162 LEU163 THR164 ASP165 ALA166 ALA167 ILE168 LYS169 LYS170 ILE171 GLU172 ALA173 ALA174 LEU175 ALA176 ASP177 LYS178 GLU179 ALA180 GLU181 LEU182 MET183 GLN184 PHE185
Unit 4 PRO27 GLN28 LYS29 ARG30 GLY31 VAL32 CYS33 THR34 ARG35 VAL36 TYR37 THR38 THR39 THR40 PRO41 LYS42 LYS43 PRO44 ASN45 SER46 ALA47 LEU48 ARG49 LYS50 VAL51 CYS52 ARG53 VAL54 ARG55 LEU56 THR57 ASN58 GLY59 PHE60 GLU61 VAL62 THR63 SER64 TYR65 ILE66 GLY67 GLY68 GLU69 GLY70 HIS71 ASN72 LEU73 GLN74 GLU75 HIS76 SER77 VAL78 ILE79 LEU80 ILE81 ARG82 GLY83 GLY84 ARG85 VAL86 LYS87 ASP88 LEU89 PRO90 GLY91 VAL92 ARG93 TYR94 HIS95 THR96 VAL97 ARG98 GLY99 ALA100 LEU101 ASP102 CYS103 SER104 GLY105 VAL106 LYS107 ASP108 ARG109 LYS110 GLN111 ALA112 ARG113 SER114 LYS115 TYR116 GLY117 VAL118 LYS119 ARG120 PRO121 LYS122 ALA123

Nucleic acids
Unit 1 G1906 G1907 C1908 C1909 G1910 U1911 A1912 A1913 C1914 U1915 A1916 U1917 A1918 A1919 C1920 G1921 G1922 U1923 C1924 C1925 U1926 A1927 A1928 G1929 G1930 U1931 A1932 G1933 C1934 G1935 A1936 A1937 A1938 U1939 U1940 C1941 C1942 U1943 U1944 G1945 U1946 C1947 G1948 G1949 G1950 U1951 A1952 A1953 G1954 U1955 U1956 C1957 C1958 G1959 A1960 C1961 C1962 U1963 G1964
Unit 2 G1405 U1406 C1407 A1408 C1409 A1410 C1411 C1412 A1413 U1414 G1415 G1416 G1417 A1418 G1419 U1420 G1421 G1422 G1423 U1424 A1476 U1477 U1478 C1479 A1480 U1481 G1482 A1483 C1484 U1485 G1486 G1487 G1488 G1489 U1490 G1491 A1492 A1493 G1494 U1495

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany