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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MVL BOUND TO MAN3GLCNAC2
Keywords MVL, HIV-1, CARBOHYDRATE BINDING, SUGAR BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1ZHS     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MANNAN-BINDING LECTIN  A 113 865 0
2  Protein   MANNAN-BINDING LECTIN  B 113 865 0
3  Protein   MANNAN-BINDING LECTIN  C 113 865 0
4  Protein   MANNAN-BINDING LECTIN  D 113 865 0
5  Protein   MANNAN-BINDING LECTIN  E 113 865 0
6  Protein   MANNAN-BINDING LECTIN  F 113 865 0
7  Protein   MANNAN-BINDING LECTIN  G 113 865 0
8  Protein   MANNAN-BINDING LECTIN  H 113 865 0
9  Ligand    I 5 0 62
10  Ligand    J 5 0 62
11  Ligand    K 5 0 62
12  Ligand    L 5 0 62
13  Ligand    M 5 0 62
14  Ligand    N 5 0 62
15  Ligand    O 5 0 62
16  Ligand    P 5 0 62
17  Ligand    Q 5 0 62
18  Ligand    R 5 0 62
19  Ligand    S 5 0 62
20  Ligand    T 5 0 62
21  Ligand    U 5 0 62
22  Ligand    V 5 0 62
23  Ligand    W 5 0 62
24  Ligand    X 5 0 62
25  Ligand   MANNAN-BINDING LECTIN  A 4 0 16
26  Ligand   MANNAN-BINDING LECTIN  B 3 0 12
27  Ligand   MANNAN-BINDING LECTIN  C 2 0 8
28  Ligand   MANNAN-BINDING LECTIN  D 3 0 12
29  Ligand   MANNAN-BINDING LECTIN  E 4 0 17
30  Ligand   MANNAN-BINDING LECTIN  F 3 0 12
31  Ligand   MANNAN-BINDING LECTIN  G 7 0 29
32  Ligand   MANNAN-BINDING LECTIN  H 2 0 8
33 Water     643 0 643
total       1655 6920 1749

Proteins
Unit 1 ALA1 SER2 TYR3 LYS4 VAL5 ASN6 ILE7 PRO8 ALA9 GLY10 PRO11 LEU12 TRP13 SER14 ASN15 ALA16 GLU17 ALA18 GLN19 GLN20 VAL21 GLY22 PRO23 LYS24 ILE25 ALA26 ALA27 ALA28 HIS29 GLN30 GLY31 ASN32 PHE33 THR34 GLY35 GLN36 TRP37 THR38 THR39 VAL40 VAL41 GLU42 SER43 ALA44 MET45 SER46 VAL47 VAL48 GLU49 VAL50 GLU51 LEU52 GLN53 VAL54 GLU55 ASN56 THR57 GLY58 ILE59 HIS60 GLU61 PHE62 LYS63 THR64 ASP65 VAL66 LEU67 ALA68 GLY69 PRO70 LEU71 TRP72 SER73 ASN74 ASP75 GLU76 ALA77 GLN78 LYS79 LEU80 GLY81 PRO82 GLN83 ILE84 ALA85 ALA86 SER87 TYR88 GLY89 ALA90 GLU91 PHE92 THR93 GLY94 GLN95 TRP96 ARG97 THR98 ILE99 VAL100 GLU101 GLY102 VAL103 MET104 SER105 VAL106 ILE107 GLN108 ILE109 LYS110 TYR111 THR112 PHE113
Unit 2 ALA1 SER2 TYR3 LYS4 VAL5 ASN6 ILE7 PRO8 ALA9 GLY10 PRO11 LEU12 TRP13 SER14 ASN15 ALA16 GLU17 ALA18 GLN19 GLN20 VAL21 GLY22 PRO23 LYS24 ILE25 ALA26 ALA27 ALA28 HIS29 GLN30 GLY31 ASN32 PHE33 THR34 GLY35 GLN36 TRP37 THR38 THR39 VAL40 VAL41 GLU42 SER43 ALA44 MET45 SER46 VAL47 VAL48 GLU49 VAL50 GLU51 LEU52 GLN53 VAL54 GLU55 ASN56 THR57 GLY58 ILE59 HIS60 GLU61 PHE62 LYS63 THR64 ASP65 VAL66 LEU67 ALA68 GLY69 PRO70 LEU71 TRP72 SER73 ASN74 ASP75 GLU76 ALA77 GLN78 LYS79 LEU80 GLY81 PRO82 GLN83 ILE84 ALA85 ALA86 SER87 TYR88 GLY89 ALA90 GLU91 PHE92 THR93 GLY94 GLN95 TRP96 ARG97 THR98 ILE99 VAL100 GLU101 GLY102 VAL103 MET104 SER105 VAL106 ILE107 GLN108 ILE109 LYS110 TYR111 THR112 PHE113
Unit 3 ALA1 SER2 TYR3 LYS4 VAL5 ASN6 ILE7 PRO8 ALA9 GLY10 PRO11 LEU12 TRP13 SER14 ASN15 ALA16 GLU17 ALA18 GLN19 GLN20 VAL21 GLY22 PRO23 LYS24 ILE25 ALA26 ALA27 ALA28 HIS29 GLN30 GLY31 ASN32 PHE33 THR34 GLY35 GLN36 TRP37 THR38 THR39 VAL40 VAL41 GLU42 SER43 ALA44 MET45 SER46 VAL47 VAL48 GLU49 VAL50 GLU51 LEU52 GLN53 VAL54 GLU55 ASN56 THR57 GLY58 ILE59 HIS60 GLU61 PHE62 LYS63 THR64 ASP65 VAL66 LEU67 ALA68 GLY69 PRO70 LEU71 TRP72 SER73 ASN74 ASP75 GLU76 ALA77 GLN78 LYS79 LEU80 GLY81 PRO82 GLN83 ILE84 ALA85 ALA86 SER87 TYR88 GLY89 ALA90 GLU91 PHE92 THR93 GLY94 GLN95 TRP96 ARG97 THR98 ILE99 VAL100 GLU101 GLY102 VAL103 MET104 SER105 VAL106 ILE107 GLN108 ILE109 LYS110 TYR111 THR112 PHE113
Unit 4 ALA1 SER2 TYR3 LYS4 VAL5 ASN6 ILE7 PRO8 ALA9 GLY10 PRO11 LEU12 TRP13 SER14 ASN15 ALA16 GLU17 ALA18 GLN19 GLN20 VAL21 GLY22 PRO23 LYS24 ILE25 ALA26 ALA27 ALA28 HIS29 GLN30 GLY31 ASN32 PHE33 THR34 GLY35 GLN36 TRP37 THR38 THR39 VAL40 VAL41 GLU42 SER43 ALA44 MET45 SER46 VAL47 VAL48 GLU49 VAL50 GLU51 LEU52 GLN53 VAL54 GLU55 ASN56 THR57 GLY58 ILE59 HIS60 GLU61 PHE62 LYS63 THR64 ASP65 VAL66 LEU67 ALA68 GLY69 PRO70 LEU71 TRP72 SER73 ASN74 ASP75 GLU76 ALA77 GLN78 LYS79 LEU80 GLY81 PRO82 GLN83 ILE84 ALA85 ALA86 SER87 TYR88 GLY89 ALA90 GLU91 PHE92 THR93 GLY94 GLN95 TRP96 ARG97 THR98 ILE99 VAL100 GLU101 GLY102 VAL103 MET104 SER105 VAL106 ILE107 GLN108 ILE109 LYS110 TYR111 THR112 PHE113
Unit 5 ALA1 SER2 TYR3 LYS4 VAL5 ASN6 ILE7 PRO8 ALA9 GLY10 PRO11 LEU12 TRP13 SER14 ASN15 ALA16 GLU17 ALA18 GLN19 GLN20 VAL21 GLY22 PRO23 LYS24 ILE25 ALA26 ALA27 ALA28 HIS29 GLN30 GLY31 ASN32 PHE33 THR34 GLY35 GLN36 TRP37 THR38 THR39 VAL40 VAL41 GLU42 SER43 ALA44 MET45 SER46 VAL47 VAL48 GLU49 VAL50 GLU51 LEU52 GLN53 VAL54 GLU55 ASN56 THR57 GLY58 ILE59 HIS60 GLU61 PHE62 LYS63 THR64 ASP65 VAL66 LEU67 ALA68 GLY69 PRO70 LEU71 TRP72 SER73 ASN74 ASP75 GLU76 ALA77 GLN78 LYS79 LEU80 GLY81 PRO82 GLN83 ILE84 ALA85 ALA86 SER87 TYR88 GLY89 ALA90 GLU91 PHE92 THR93 GLY94 GLN95 TRP96 ARG97 THR98 ILE99 VAL100 GLU101 GLY102 VAL103 MET104 SER105 VAL106 ILE107 GLN108 ILE109 LYS110 TYR111 THR112 PHE113
Unit 6 ALA1 SER2 TYR3 LYS4 VAL5 ASN6 ILE7 PRO8 ALA9 GLY10 PRO11 LEU12 TRP13 SER14 ASN15 ALA16 GLU17 ALA18 GLN19 GLN20 VAL21 GLY22 PRO23 LYS24 ILE25 ALA26 ALA27 ALA28 HIS29 GLN30 GLY31 ASN32 PHE33 THR34 GLY35 GLN36 TRP37 THR38 THR39 VAL40 VAL41 GLU42 SER43 ALA44 MET45 SER46 VAL47 VAL48 GLU49 VAL50 GLU51 LEU52 GLN53 VAL54 GLU55 ASN56 THR57 GLY58 ILE59 HIS60 GLU61 PHE62 LYS63 THR64 ASP65 VAL66 LEU67 ALA68 GLY69 PRO70 LEU71 TRP72 SER73 ASN74 ASP75 GLU76 ALA77 GLN78 LYS79 LEU80 GLY81 PRO82 GLN83 ILE84 ALA85 ALA86 SER87 TYR88 GLY89 ALA90 GLU91 PHE92 THR93 GLY94 GLN95 TRP96 ARG97 THR98 ILE99 VAL100 GLU101 GLY102 VAL103 MET104 SER105 VAL106 ILE107 GLN108 ILE109 LYS110 TYR111 THR112 PHE113
Unit 7 ALA1 SER2 TYR3 LYS4 VAL5 ASN6 ILE7 PRO8 ALA9 GLY10 PRO11 LEU12 TRP13 SER14 ASN15 ALA16 GLU17 ALA18 GLN19 GLN20 VAL21 GLY22 PRO23 LYS24 ILE25 ALA26 ALA27 ALA28 HIS29 GLN30 GLY31 ASN32 PHE33 THR34 GLY35 GLN36 TRP37 THR38 THR39 VAL40 VAL41 GLU42 SER43 ALA44 MET45 SER46 VAL47 VAL48 GLU49 VAL50 GLU51 LEU52 GLN53 VAL54 GLU55 ASN56 THR57 GLY58 ILE59 HIS60 GLU61 PHE62 LYS63 THR64 ASP65 VAL66 LEU67 ALA68 GLY69 PRO70 LEU71 TRP72 SER73 ASN74 ASP75 GLU76 ALA77 GLN78 LYS79 LEU80 GLY81 PRO82 GLN83 ILE84 ALA85 ALA86 SER87 TYR88 GLY89 ALA90 GLU91 PHE92 THR93 GLY94 GLN95 TRP96 ARG97 THR98 ILE99 VAL100 GLU101 GLY102 VAL103 MET104 SER105 VAL106 ILE107 GLN108 ILE109 LYS110 TYR111 THR112 PHE113
Unit 8 ALA1 SER2 TYR3 LYS4 VAL5 ASN6 ILE7 PRO8 ALA9 GLY10 PRO11 LEU12 TRP13 SER14 ASN15 ALA16 GLU17 ALA18 GLN19 GLN20 VAL21 GLY22 PRO23 LYS24 ILE25 ALA26 ALA27 ALA28 HIS29 GLN30 GLY31 ASN32 PHE33 THR34 GLY35 GLN36 TRP37 THR38 THR39 VAL40 VAL41 GLU42 SER43 ALA44 MET45 SER46 VAL47 VAL48 GLU49 VAL50 GLU51 LEU52 GLN53 VAL54 GLU55 ASN56 THR57 GLY58 ILE59 HIS60 GLU61 PHE62 LYS63 THR64 ASP65 VAL66 LEU67 ALA68 GLY69 PRO70 LEU71 TRP72 SER73 ASN74 ASP75 GLU76 ALA77 GLN78 LYS79 LEU80 GLY81 PRO82 GLN83 ILE84 ALA85 ALA86 SER87 TYR88 GLY89 ALA90 GLU91 PHE92 THR93 GLY94 GLN95 TRP96 ARG97 THR98 ILE99 VAL100 GLU101 GLY102 VAL103 MET104 SER105 VAL106 ILE107 GLN108 ILE109 LYS110 TYR111 THR112 PHE113

Ligands
Unit 9 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 10 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 11 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 12 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 13 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 14 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 15 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 16 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 17 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 18 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 19 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 20 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 21 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 22 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 23 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 24 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 25 EDO801 EDO805 EDO806 EDO817
Unit 26 EDO810 EDO818 EDO824
Unit 27 EDO814 EDO819
Unit 28 EDO815 EDO816 EDO820
Unit 29 PO4702 EDO802 EDO803 EDO821
Unit 30 EDO804 EDO809 EDO822
Unit 31 PO4701 EDO807 EDO808 EDO811 EDO812 EDO813 EDO826
Unit 32 EDO823 EDO825

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany