1ZCC - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE AGROBACTERIUM TUMEFACIENS STR.C58
• Keywords: NYSGXRC, T2047, GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, AGROBACTERIUM TUMEFACIENS STR. C58, STRUCTURAL GENOMICS, PS PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER STRUCTURAL GENOMICS, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1ZCC	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE	A	240	1855	0
2	Protein	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE	B	228	1705	0
3	Protein	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE	C	233	1786	0
4	Protein	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE	D	231	1736	0
5	Protein	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE	E	233	1780	0
6	Protein	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE	F	235	1794	0
7	Ligand	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE	A	2	0	9
8	Ligand	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE	B	2	0	9
9	Ligand	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE	C	2	0	9
10	Ligand	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE	D	2	0	9
11	Ligand	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE	E	2	0	9
12	Ligand	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE	F	2	0	9
13	Water			276	0	276
total				1688	10656	330

Proteins

Unit 1	MET 1 THR 2 LYS 3 ILE 4 VAL 5 SER 6 HIS 7 ARG 8 GLY 9 ALA 10 ASN 11 ARG 12 PHE 13 ALA 14 PRO 15 GLU 16 ASN 17 THR 18 PHE 19 ALA 20 ALA 21 ALA 22 ASP 23 LEU 24 ALA 25 LEU 26 GLN 27 GLN 28 GLY 29 ALA 30 ASP 31 TYR 32 ILE 33 GLU 34 LEU 35 ASP 36 VAL 37 ARG 38 GLU 39 SER 40 ALA 41 ASP 42 GLY 43 VAL 44 LEU 45 TYR 46 VAL 47 ILE 48 HIS 49 ASP 50 GLU 51 THR 52 LEU 53 ASP 54 ARG 55 THR 56 THR 57 ASN 58 GLY 59 THR 60 GLY 61 PRO 62 VAL 63 GLY 64 HIS 65 MET 66 LEU 67 SER 68 SER 69 GLU 70 ILE 71 ASP 72 THR 73 LEU 74 ASP 75 ALA 76 GLY 77 GLY 78 TRP 79 PHE 80 ASP 81 ASP 82 ARG 83 PHE 84 LYS 85 GLY 86 ALA 87 ILE 88 VAL 89 PRO 90 ARG 91 LEU 92 ASP 93 ALA 94 TYR 95 LEU 96 GLU 97 HIS 98 LEU 99 ARG 100 GLY 101 ARG 102 ALA 103 GLY 104 VAL 105 TYR 106 ILE 107 GLU 108 LEU 109 LYS 110 TYR 111 CYS 112 ASP 113 PRO 114 ALA 115 LYS 116 VAL 117 ALA 118 ALA 119 LEU 120 VAL 121 ARG 122 HIS 123 LEU 124 GLY 125 MET 126 VAL 127 ARG 128 ASP 129 THR 130 PHE 131 TYR 132 PHE 133 SER 134 PHE 135 SER 136 GLU 137 GLU 138 MET 139 ARG 140 GLN 141 GLY 142 LEU 143 GLN 144 SER 145 ILE 146 ALA 147 PRO 148 GLU 149 PHE 150 ARG 151 ARG 152 MET 153 MET 154 THR 155 LEU 156 ASP 157 ILE 158 ALA 159 LYS 160 SER 161 PRO 162 SER 163 LEU 164 VAL 165 GLY 166 ALA 167 VAL 168 HIS 169 HIS 170 ALA 171 SER 172 ILE 173 ILE 174 GLU 175 ILE 176 THR 177 PRO 178 ALA 179 GLN 180 MET 181 ARG 182 ARG 183 PRO 184 GLY 185 ILE 186 ILE 187 GLU 188 ALA 189 SER 190 ARG 191 LYS 192 ALA 193 GLY 194 LEU 195 GLU 196 ILE 197 MET 198 VAL 199 TYR 200 TYR 201 GLY 202 GLY 203 ASP 204 ASP 205 MET 206 ALA 207 VAL 208 HIS 209 ARG 210 GLU 211 ILE 212 ALA 213 THR 214 SER 215 ASP 216 VAL 217 ASP 218 TYR 219 ILE 220 ASN 221 LEU 222 ASP 223 ARG 224 PRO 225 ASP 226 LEU 227 PHE 228 ALA 229 ALA 230 VAL 231 ARG 232 SER 233 GLY 234 MET 235 ALA 236 GLU 237 LEU 238 LEU 239 LEU 240
Unit 2	MET 1 THR 2 LYS 3 ILE 4 VAL 5 SER 6 HIS 7 ARG 8 GLY 9 ALA 10 ASN 11 ARG 12 PHE 13 ALA 14 PRO 15 GLU 16 ASN 17 THR 18 PHE 19 ALA 20 ALA 21 ALA 22 ASP 23 LEU 24 ALA 25 LEU 26 GLN 27 GLN 28 GLY 29 ALA 30 ASP 31 TYR 32 ILE 33 GLU 34 LEU 35 ASP 36 VAL 37 ARG 38 GLU 39 SER 40 ALA 41 ASP 42 GLY 43 VAL 44 LEU 45 TYR 46 VAL 47 ILE 48 HIS 49 ASP 50 GLU 51 THR 52 LEU 53 ASP 54 ARG 55 THR 56 THR 57 ASN 58 GLY 59 THR 60 GLY 61 PRO 62 VAL 63 GLY 64 HIS 65 MET 66 LEU 67 SER 68 SER 69 GLU 70 ILE 71 ASP 72 THR 73 LEU 74 ASP 75 ALA 76 GLY 77 GLY 78 TRP 79 PHE 80 ARG 83 PHE 84 LYS 85 GLY 86 ALA 87 ILE 88 VAL 89 PRO 90 ARG 91 LEU 92 ASP 93 ALA 94 TYR 95 LEU 96 GLU 97 HIS 98 LEU 99 ARG 100 GLY 101 ARG 102 ALA 103 GLY 104 VAL 105 TYR 106 ILE 107 GLU 108 LEU 109 LYS 110 TYR 111 CYS 112 ASP 113 PRO 114 ALA 115 LYS 116 VAL 117 ALA 118 ALA 119 LEU 120 VAL 121 ARG 122 HIS 123 LEU 124 GLY 125 MET 126 VAL 127 ARG 128 ASP 129 THR 130 PHE 131 TYR 132 PHE 133 SER 134 PHE 135 SER 136 GLU 137 GLU 138 MET 139 ARG 140 GLN 141 GLY 142 LEU 143 GLN 144 SER 145 ILE 146 ALA 147 PRO 148 GLU 149 PHE 150 ARG 151 ARG 152 MET 153 MET 154 THR 155 LEU 156 ASP 157 ILE 158 ALA 159 LYS 160 SER 161 PRO 162 SER 163 LEU 164 VAL 165 GLY 166 ALA 167 VAL 168 HIS 169 HIS 170 ALA 171 SER 172 ILE 173 ILE 174 GLU 175 ILE 176 THR 177 PRO 178 ALA 179 GLN 180 MET 181 ARG 182 ARG 183 PRO 184 GLY 185 ILE 186 ILE 187 GLU 188 ALA 189 SER 190 ARG 191 LYS 192 ALA 193 GLY 194 LEU 195 GLU 196 ILE 197 MET 198 VAL 199 TYR 200 TYR 201 GLY 202 GLY 203 ASP 204 ASP 205 MET 206 ALA 207 VAL 208 HIS 209 ARG 210 GLU 211 ILE 212 ALA 213 THR 214 SER 215 ASP 216 VAL 217 ASP 218 TYR 219 ILE 220 ASN 221 LEU 222 ASP 223 ARG 224 PRO 225 ASP 226 LEU 227 PHE 228 ALA 229 ALA 230
Unit 3	MET 1 THR 2 LYS 3 ILE 4 VAL 5 SER 6 HIS 7 ARG 8 GLY 9 ALA 10 ASN 11 ARG 12 PHE 13 ALA 14 PRO 15 GLU 16 ASN 17 THR 18 PHE 19 ALA 20 ALA 21 ALA 22 ASP 23 LEU 24 ALA 25 LEU 26 GLN 27 GLN 28 GLY 29 ALA 30 ASP 31 TYR 32 ILE 33 GLU 34 LEU 35 ASP 36 VAL 37 ARG 38 GLU 39 SER 40 ALA 41 ASP 42 GLY 43 VAL 44 LEU 45 TYR 46 VAL 47 ILE 48 HIS 49 ASP 50 GLU 51 THR 52 LEU 53 ASP 54 ARG 55 THR 56 THR 57 ASN 58 GLY 59 THR 60 GLY 61 PRO 62 VAL 63 GLY 64 HIS 65 MET 66 LEU 67 SER 68 SER 69 GLU 70 ILE 71 ASP 72 THR 73 LEU 74 ASP 75 ALA 76 GLY 77 GLY 78 TRP 79 PHE 80 ASP 81 ASP 82 ARG 83 PHE 84 GLY 86 ALA 87 ILE 88 VAL 89 PRO 90 ARG 91 LEU 92 ASP 93 ALA 94 TYR 95 LEU 96 GLU 97 HIS 98 LEU 99 ARG 100 GLY 101 ARG 102 ALA 103 GLY 104 VAL 105 TYR 106 ILE 107 GLU 108 LEU 109 LYS 110 TYR 111 CYS 112 ASP 113 PRO 114 ALA 115 LYS 116 VAL 117 ALA 118 ALA 119 LEU 120 VAL 121 ARG 122 HIS 123 LEU 124 GLY 125 MET 126 VAL 127 ARG 128 ASP 129 THR 130 PHE 131 TYR 132 PHE 133 SER 134 PHE 135 SER 136 GLU 137 GLU 138 MET 139 ARG 140 GLN 141 GLY 142 LEU 143 GLN 144 SER 145 ILE 146 ALA 147 PRO 148 GLU 149 PHE 150 ARG 151 ARG 152 MET 153 MET 154 THR 155 LEU 156 ASP 157 ILE 158 ALA 159 LYS 160 SER 161 PRO 162 SER 163 LEU 164 VAL 165 GLY 166 ALA 167 VAL 168 HIS 169 HIS 170 ALA 171 SER 172 ILE 173 ILE 174 GLU 175 ILE 176 THR 177 PRO 178 ALA 179 GLN 180 MET 181 ARG 182 ARG 183 PRO 184 GLY 185 ILE 186 ILE 187 GLU 188 ALA 189 SER 190 ARG 191 LYS 192 ALA 193 GLY 194 LEU 195 GLU 196 ILE 197 MET 198 VAL 199 TYR 200 TYR 201 GLY 202 GLY 203 ASP 204 ASP 205 MET 206 ALA 207 VAL 208 HIS 209 ARG 210 GLU 211 ILE 212 ALA 213 THR 214 SER 215 ASP 216 VAL 217 ASP 218 TYR 219 ILE 220 ASN 221 LEU 222 ASP 223 ARG 224 PRO 225 ASP 226 LEU 227 PHE 228 ALA 229 ALA 230 VAL 231 ARG 232 SER 233 GLY 234
Unit 4	MET 1 THR 2 LYS 3 ILE 4 VAL 5 SER 6 HIS 7 ARG 8 GLY 9 ALA 10 ASN 11 ARG 12 PHE 13 ALA 14 PRO 15 GLU 16 ASN 17 THR 18 PHE 19 ALA 20 ALA 21 ALA 22 ASP 23 LEU 24 ALA 25 LEU 26 GLN 27 GLN 28 GLY 29 ALA 30 ASP 31 TYR 32 ILE 33 GLU 34 LEU 35 ASP 36 VAL 37 ARG 38 GLU 39 SER 40 ALA 41 ASP 42 GLY 43 VAL 44 LEU 45 TYR 46 VAL 47 ILE 48 HIS 49 ASP 50 GLU 51 THR 52 LEU 53 ASP 54 ARG 55 THR 56 THR 57 ASN 58 GLY 59 THR 60 GLY 61 PRO 62 VAL 63 GLY 64 HIS 65 MET 66 LEU 67 SER 68 SER 69 GLU 70 ILE 71 ASP 72 THR 73 LEU 74 ASP 75 ALA 76 GLY 77 GLY 78 TRP 79 PHE 80 ASP 81 ASP 82 ARG 83 PHE 84 LYS 85 GLY 86 ALA 87 ILE 88 VAL 89 PRO 90 ARG 91 LEU 92 ASP 93 ALA 94 TYR 95 LEU 96 GLU 97 HIS 98 LEU 99 ARG 100 GLY 101 ARG 102 ALA 103 GLY 104 VAL 105 TYR 106 ILE 107 GLU 108 LEU 109 LYS 110 TYR 111 CYS 112 ASP 113 PRO 114 ALA 115 LYS 116 VAL 117 ALA 118 ALA 119 LEU 120 VAL 121 ARG 122 HIS 123 LEU 124 GLY 125 MET 126 VAL 127 ARG 128 ASP 129 THR 130 PHE 131 TYR 132 PHE 133 SER 134 PHE 135 SER 136 GLU 137 GLU 138 MET 139 ARG 140 GLN 141 GLY 142 LEU 143 GLN 144 SER 145 ILE 146 ALA 147 PRO 148 GLU 149 PHE 150 ARG 151 ARG 152 MET 153 MET 154 THR 155 LEU 156 ASP 157 ILE 158 ALA 159 LYS 160 SER 161 PRO 162 SER 163 LEU 164 VAL 165 GLY 166 ALA 167 VAL 168 HIS 169 HIS 170 ALA 171 SER 172 ILE 173 ILE 174 GLU 175 ILE 176 THR 177 PRO 178 ALA 179 GLN 180 MET 181 ARG 182 ARG 183 PRO 184 GLY 185 ILE 186 ILE 187 GLU 188 ALA 189 SER 190 ARG 191 LYS 192 ALA 193 GLY 194 LEU 195 GLU 196 ILE 197 MET 198 VAL 199 TYR 200 TYR 201 GLY 202 GLY 203 ASP 204 ASP 205 MET 206 ALA 207 VAL 208 HIS 209 ARG 210 GLU 211 ILE 212 ALA 213 THR 214 SER 215 ASP 216 VAL 217 ASP 218 TYR 219 ILE 220 ASN 221 LEU 222 ASP 223 ARG 224 PRO 225 ASP 226 LEU 227 PHE 228 ALA 229 ALA 230 VAL 231
Unit 5	MET 1 THR 2 LYS 3 ILE 4 VAL 5 SER 6 HIS 7 ARG 8 GLY 9 ALA 10 ASN 11 ARG 12 PHE 13 ALA 14 PRO 15 GLU 16 ASN 17 THR 18 PHE 19 ALA 20 ALA 21 ALA 22 ASP 23 LEU 24 ALA 25 LEU 26 GLN 27 GLN 28 GLY 29 ALA 30 ASP 31 TYR 32 ILE 33 GLU 34 LEU 35 ASP 36 VAL 37 ARG 38 GLU 39 SER 40 ALA 41 ASP 42 GLY 43 VAL 44 LEU 45 TYR 46 VAL 47 ILE 48 HIS 49 ASP 50 GLU 51 THR 52 LEU 53 ASP 54 ARG 55 THR 56 THR 57 ASN 58 GLY 59 THR 60 GLY 61 PRO 62 VAL 63 GLY 64 HIS 65 MET 66 LEU 67 SER 68 SER 69 GLU 70 ILE 71 ASP 72 THR 73 LEU 74 ASP 75 ALA 76 GLY 77 GLY 78 TRP 79 PHE 80 ASP 81 ASP 82 ARG 83 PHE 84 LYS 85 GLY 86 ALA 87 ILE 88 VAL 89 PRO 90 ARG 91 LEU 92 ASP 93 ALA 94 TYR 95 LEU 96 GLU 97 HIS 98 LEU 99 ARG 100 GLY 101 ARG 102 ALA 103 GLY 104 VAL 105 TYR 106 ILE 107 GLU 108 LEU 109 LYS 110 TYR 111 CYS 112 ASP 113 PRO 114 ALA 115 LYS 116 VAL 117 ALA 118 ALA 119 LEU 120 VAL 121 ARG 122 HIS 123 LEU 124 GLY 125 MET 126 VAL 127 ARG 128 ASP 129 THR 130 PHE 131 TYR 132 PHE 133 SER 134 PHE 135 SER 136 GLU 137 GLU 138 MET 139 ARG 140 GLN 141 GLY 142 LEU 143 GLN 144 SER 145 ILE 146 ALA 147 PRO 148 GLU 149 PHE 150 ARG 151 ARG 152 MET 153 MET 154 THR 155 LEU 156 ASP 157 ILE 158 ALA 159 LYS 160 SER 161 PRO 162 SER 163 LEU 164 VAL 165 GLY 166 ALA 167 VAL 168 HIS 169 HIS 170 ALA 171 SER 172 ILE 173 ILE 174 GLU 175 ILE 176 THR 177 PRO 178 ALA 179 GLN 180 MET 181 ARG 182 ARG 183 PRO 184 GLY 185 ILE 186 ILE 187 GLU 188 ALA 189 SER 190 ARG 191 LYS 192 ALA 193 GLY 194 LEU 195 GLU 196 ILE 197 MET 198 VAL 199 TYR 200 TYR 201 GLY 202 GLY 203 ASP 204 ASP 205 MET 206 ALA 207 VAL 208 HIS 209 ARG 210 GLU 211 ILE 212 ALA 213 THR 214 SER 215 ASP 216 VAL 217 ASP 218 TYR 219 ILE 220 ASN 221 LEU 222 ASP 223 ARG 224 PRO 225 ASP 226 LEU 227 PHE 228 ALA 229 ALA 230 VAL 231 ARG 232 SER 233
Unit 6	MET 1 THR 2 LYS 3 ILE 4 VAL 5 SER 6 HIS 7 ARG 8 GLY 9 ALA 10 ASN 11 ARG 12 PHE 13 ALA 14 PRO 15 GLU 16 ASN 17 THR 18 PHE 19 ALA 20 ALA 21 ALA 22 ASP 23 LEU 24 ALA 25 LEU 26 GLN 27 GLN 28 GLY 29 ALA 30 ASP 31 TYR 32 ILE 33 GLU 34 LEU 35 ASP 36 VAL 37 ARG 38 GLU 39 SER 40 ALA 41 ASP 42 GLY 43 VAL 44 LEU 45 TYR 46 VAL 47 ILE 48 HIS 49 ASP 50 GLU 51 THR 52 LEU 53 ASP 54 ARG 55 THR 56 THR 57 ASN 58 GLY 59 THR 60 GLY 61 PRO 62 VAL 63 GLY 64 HIS 65 MET 66 LEU 67 SER 68 SER 69 GLU 70 ILE 71 ASP 72 THR 73 LEU 74 ASP 75 ALA 76 GLY 77 GLY 78 TRP 79 PHE 80 ASP 81 ASP 82 ARG 83 PHE 84 LYS 85 GLY 86 ALA 87 ILE 88 VAL 89 PRO 90 ARG 91 LEU 92 ASP 93 ALA 94 TYR 95 LEU 96 GLU 97 HIS 98 LEU 99 ARG 100 GLY 101 ARG 102 ALA 103 GLY 104 VAL 105 TYR 106 ILE 107 GLU 108 LEU 109 LYS 110 TYR 111 CYS 112 ASP 113 PRO 114 ALA 115 LYS 116 VAL 117 ALA 118 ALA 119 LEU 120 VAL 121 ARG 122 HIS 123 LEU 124 GLY 125 MET 126 VAL 127 ARG 128 ASP 129 THR 130 PHE 131 TYR 132 PHE 133 SER 134 PHE 135 SER 136 GLU 137 GLU 138 MET 139 ARG 140 GLN 141 GLY 142 LEU 143 GLN 144 SER 145 ILE 146 ALA 147 PRO 148 GLU 149 PHE 150 ARG 151 ARG 152 MET 153 MET 154 THR 155 LEU 156 ASP 157 ILE 158 ALA 159 LYS 160 SER 161 PRO 162 SER 163 LEU 164 VAL 165 GLY 166 ALA 167 VAL 168 HIS 169 HIS 170 ALA 171 SER 172 ILE 173 ILE 174 GLU 175 ILE 176 THR 177 PRO 178 ALA 179 GLN 180 MET 181 ARG 182 ARG 183 PRO 184 GLY 185 ILE 186 ILE 187 GLU 188 ALA 189 SER 190 ARG 191 LYS 192 ALA 193 GLY 194 LEU 195 GLU 196 ILE 197 MET 198 VAL 199 TYR 200 TYR 201 GLY 202 GLY 203 ASP 204 ASP 205 MET 206 ALA 207 VAL 208 HIS 209 ARG 210 GLU 211 ILE 212 ALA 213 THR 214 SER 215 ASP 216 VAL 217 ASP 218 TYR 219 ILE 220 ASN 221 LEU 222 ASP 223 ARG 224 PRO 225 ASP 226 LEU 227 PHE 228 ALA 229 ALA 230 VAL 231 ARG 232 SER 233 GLY 234 MET 235

Ligands

Unit 7	ACT 801 SO4 4770
Unit 8	ACT 802 SO4 4771
Unit 9	ACT 803 SO4 4772
Unit 10	ACT 804 SO4 4773
Unit 11	ACT 805 SO4 4774
Unit 12	ACT 806 SO4 4775