1ZA3 - Sequence, Chains, Asymmetric and Biological Units

• Title: THE CRYSTAL STRUCTURE OF THE YSD1 FAB BOUND TO DR5
• Keywords: PHAGE DISPLAY, PROTEIN ENGINEERING, COMBINATORIAL MUTAGENESI ANTIBODY LIBRARY, DEATH RECEPTOR-5, IMMUNE SYSTEM-SIGNALING COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1ZA3	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	FAB-YSD1 LIGHT CHAIN	A	213	1626	0
2	Protein	FAB-YSD1 HEAVY CHAIN	B	224	1688	0
3	Protein		R	91	707	0
4	Protein	FAB-YSD1 LIGHT CHAIN	L	213	1626	0
5	Protein	FAB-YSD1 HEAVY CHAIN	H	224	1688	0
6	Protein		S	106	814	0
total				1071	8149	0

Proteins

Unit 1	ASP 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 ASP 17 ARG 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 ASP 28 VAL 29 ASN 30 THR 31 ALA 32 VAL 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 LYS 42 ALA 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 ALA 50 ALA 51 SER 52 TYR 53 LEU 54 TYR 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLN 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 THR 85 TYR 86 TYR 87 CYS 88 GLN 89 SER 90 SER 91 SER 92 SER 93 PRO 94 TYR 95 THR 96 PHE 97 GLY 98 GLN 99 GLY 100 THR 101 LYS 102 VAL 103 GLU 104 ILE 105 LYS 106 ARG 107 THR 108 VAL 109 ALA 110 ALA 111 PRO 112 SER 113 VAL 114 PHE 115 ILE 116 PHE 117 PRO 118 PRO 119 SER 120 ASP 121 GLU 122 GLN 123 LEU 124 LYS 125 SER 126 GLY 127 THR 128 ALA 129 SER 130 VAL 131 VAL 132 CYS 133 LEU 134 LEU 135 ASN 136 ASN 137 PHE 138 TYR 139 PRO 140 ARG 141 GLU 142 ALA 143 LYS 144 VAL 145 GLN 146 TRP 147 LYS 148 VAL 149 ASP 150 ASN 151 ALA 152 LEU 153 GLN 154 SER 155 GLY 156 ASN 157 SER 158 GLN 159 GLU 160 SER 161 VAL 162 THR 163 GLU 164 GLN 165 ASP 166 SER 167 LYS 168 ASP 169 SER 170 THR 171 TYR 172 SER 173 LEU 174 SER 175 SER 176 THR 177 LEU 178 THR 179 LEU 180 SER 181 LYS 182 ALA 183 ASP 184 TYR 185 GLU 186 LYS 187 HIS 188 LYS 189 VAL 190 TYR 191 ALA 192 CYS 193 GLU 194 VAL 195 THR 196 HIS 197 GLN 198 GLY 199 LEU 200 SER 201 SER 202 PRO 203 VAL 204 THR 205 LYS 206 SER 207 PHE 208 ASN 209 ARG 210 GLY 211 GLU 212 CYS 213
Unit 2	GLU 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 SER 28 ILE 29 TYR 30 SER 31 TYR 32 SER 33 ILE 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 ALA 49 SER 50 ILE 51 SER 52 PRO 52A TYR 53 SER 54 GLY 55 TYR 56 THR 57 SER 58 TYR 59 ALA 60 ASP 61 SER 62 VAL 63 LYS 64 GLY 65 ARG 66 PHE 67 THR 68 ILE 69 SER 70 ALA 71 ASP 72 THR 73 SER 74 LYS 75 ASN 76 THR 77 ALA 78 TYR 79 LEU 80 GLN 81 MET 82 ASN 82A SER 82B LEU 82C ARG 83 ALA 84 GLU 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 SER 93 ARG 94 TYR 95 SER 96 SER 97 TYR 98 TYR 99 SER 100 TYR 100A TYR 100B TYR 100C SER 100D SER 100E SER 100F SER 100G TYR 100H SER 100I TYR 100J ALA 100K MET 100L ASP 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 LEU 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 SER 115 THR 116 LYS 117 GLY 118 PRO 119 SER 120 VAL 121 PHE 122 PRO 123 LEU 124 ALA 125 PRO 126 SER 127 GLY 134 THR 135 ALA 136 ALA 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 ASP 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 VAL 152 SER 153 TRP 154 ASN 155 SER 156 GLY 157 ALA 158 LEU 159 THR 160 SER 161 GLY 162 VAL 163 HIS 164 THR 165 PHE 166 PRO 167 ALA 168 VAL 169 LEU 170 GLN 171 SER 172 SER 173 GLY 174 LEU 175 TYR 176 SER 177 LEU 178 SER 179 SER 180 VAL 181 VAL 182 THR 183 VAL 184 PRO 185 SER 186 SER 187 SER 188 LEU 189 GLY 190 THR 191 GLN 192 THR 193 TYR 194 ILE 195 CYS 196 ASN 197 VAL 198 ASN 199 HIS 200 LYS 201 PRO 202 SER 203 ASN 204 THR 205 LYS 206 VAL 207 ASP 208 LYS 209 LYS 210 VAL 211 GLU 212 PRO 213 LYS 214
Unit 3	SER 21 SER 22 PRO 23 SER 24 GLU 25 GLY 26 LEU 27 CYS 28 PRO 29 PRO 30 GLY 31 HIS 32 HIS 33 ILE 34 SER 35 GLU 36 ASP 37 GLY 38 ARG 39 ASP 40 CYS 41 ILE 42 SER 43 CYS 44 LYS 45 TYR 46 GLY 47 GLN 48 ASP 49 TYR 50 SER 51 THR 52 HIS 53 TRP 54 ASN 55 ASP 56 LEU 57 LEU 58 PHE 59 CYS 60 LEU 61 ARG 62 CYS 63 THR 64 ARG 65 CYS 66 ASP 67 SER 68 GLY 69 GLU 70 VAL 71 GLU 72 LEU 73 SER 74 PRO 75 CYS 76 THR 77 THR 78 THR 79 ARG 80 ASN 81 THR 82 VAL 83 CYS 84 GLN 85 CYS 86 GLU 87 GLU 88 GLY 89 THR 90 PHE 91 ARG 92 GLU 93 GLU 94 ASP 95 SER 96 PRO 97 GLU 98 MET 99 CYS 100 ARG 101 LYS 102 CYS 103 ASP 116 CYS 117 THR 118 PRO 119 TRP 120 SER 121 ASP 122 ILE 123
Unit 4	ASP 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 ASP 17 ARG 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 ASP 28 VAL 29 ASN 30 THR 31 ALA 32 VAL 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 LYS 42 ALA 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 ALA 50 ALA 51 SER 52 TYR 53 LEU 54 TYR 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLN 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 THR 85 TYR 86 TYR 87 CYS 88 GLN 89 SER 90 SER 91 SER 92 SER 93 PRO 94 TYR 95 THR 96 PHE 97 GLY 98 GLN 99 GLY 100 THR 101 LYS 102 VAL 103 GLU 104 ILE 105 LYS 106 ARG 107 THR 108 VAL 109 ALA 110 ALA 111 PRO 112 SER 113 VAL 114 PHE 115 ILE 116 PHE 117 PRO 118 PRO 119 SER 120 ASP 121 GLU 122 GLN 123 LEU 124 LYS 125 SER 126 GLY 127 THR 128 ALA 129 SER 130 VAL 131 VAL 132 CYS 133 LEU 134 LEU 135 ASN 136 ASN 137 PHE 138 TYR 139 PRO 140 ARG 141 GLU 142 ALA 143 LYS 144 VAL 145 GLN 146 TRP 147 LYS 148 VAL 149 ASP 150 ASN 151 ALA 152 LEU 153 GLN 154 SER 155 GLY 156 ASN 157 SER 158 GLN 159 GLU 160 SER 161 VAL 162 THR 163 GLU 164 GLN 165 ASP 166 SER 167 LYS 168 ASP 169 SER 170 THR 171 TYR 172 SER 173 LEU 174 SER 175 SER 176 THR 177 LEU 178 THR 179 LEU 180 SER 181 LYS 182 ALA 183 ASP 184 TYR 185 GLU 186 LYS 187 HIS 188 LYS 189 VAL 190 TYR 191 ALA 192 CYS 193 GLU 194 VAL 195 THR 196 HIS 197 GLN 198 GLY 199 LEU 200 SER 201 SER 202 PRO 203 VAL 204 THR 205 LYS 206 SER 207 PHE 208 ASN 209 ARG 210 GLY 211 GLU 212 CYS 213
Unit 5	GLU 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 SER 28 ILE 29 TYR 30 SER 31 TYR 32 SER 33 ILE 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 ALA 49 SER 50 ILE 51 SER 52 PRO 52A TYR 53 SER 54 GLY 55 TYR 56 THR 57 SER 58 TYR 59 ALA 60 ASP 61 SER 62 VAL 63 LYS 64 GLY 65 ARG 66 PHE 67 THR 68 ILE 69 SER 70 ALA 71 ASP 72 THR 73 SER 74 LYS 75 ASN 76 THR 77 ALA 78 TYR 79 LEU 80 GLN 81 MET 82 ASN 82A SER 82B LEU 82C ARG 83 ALA 84 GLU 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 SER 93 ARG 94 TYR 95 SER 96 SER 97 TYR 98 TYR 99 SER 100 TYR 100A TYR 100B TYR 100C SER 100D SER 100E SER 100F SER 100G TYR 100H SER 100I TYR 100J ALA 100K MET 100L ASP 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 LEU 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 SER 115 THR 116 LYS 117 GLY 118 PRO 119 SER 120 VAL 121 PHE 122 PRO 123 LEU 124 ALA 125 PRO 126 SER 127 GLY 134 THR 135 ALA 136 ALA 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 ASP 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 VAL 152 SER 153 TRP 154 ASN 155 SER 156 GLY 157 ALA 158 LEU 159 THR 160 SER 161 GLY 162 VAL 163 HIS 164 THR 165 PHE 166 PRO 167 ALA 168 VAL 169 LEU 170 GLN 171 SER 172 SER 173 GLY 174 LEU 175 TYR 176 SER 177 LEU 178 SER 179 SER 180 VAL 181 VAL 182 THR 183 VAL 184 PRO 185 SER 186 SER 187 SER 188 LEU 189 GLY 190 THR 191 GLN 192 THR 193 TYR 194 ILE 195 CYS 196 ASN 197 VAL 198 ASN 199 HIS 200 LYS 201 PRO 202 SER 203 ASN 204 THR 205 LYS 206 VAL 207 ASP 208 LYS 209 LYS 210 VAL 211 GLU 212 PRO 213 LYS 214
Unit 6	SER 21 SER 22 PRO 23 SER 24 GLU 25 GLY 26 LEU 27 CYS 28 PRO 29 PRO 30 GLY 31 HIS 32 HIS 33 ILE 34 SER 35 GLU 36 ASP 37 GLY 38 ARG 39 ASP 40 CYS 41 ILE 42 SER 43 CYS 44 LYS 45 TYR 46 GLY 47 GLN 48 ASP 49 TYR 50 SER 51 THR 52 HIS 53 TRP 54 ASN 55 ASP 56 LEU 57 LEU 58 PHE 59 CYS 60 LEU 61 ARG 62 CYS 63 THR 64 ARG 65 CYS 66 ASP 67 SER 68 GLY 69 GLU 70 VAL 71 GLU 72 LEU 73 SER 74 PRO 75 CYS 76 THR 77 THR 78 THR 79 ARG 80 ASN 81 THR 82 VAL 83 CYS 84 GLN 85 CYS 86 GLU 87 GLU 88 GLY 89 THR 90 PHE 91 ARG 92 GLU 93 GLU 94 ASP 95 SER 96 PRO 97 GLU 98 MET 99 CYS 100 ARG 101 LYS 102 CYS 103 ARG 104 THR 105 GLY 106 CYS 107 PRO 108 ARG 109 GLY 110 MET 111 VAL 112 LYS 113 VAL 114 GLY 115 ASP 116 CYS 117 THR 118 PRO 119 TRP 120 SER 121 ASP 122 ILE 123 GLU 124 CYS 125 VAL 126