1Z9D - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF A PUTATIVE URIDYLATE KINASE (UMP-KINASE STREPTOCOCCUS PYOGENES
• Keywords: STRUCTURAL GENOMICS; PROTEIN STRUCTURE INITIATIVE; NYSGXRC; PYRH; PUTATIVE URIDYLATE KINASE, UMP-KINASE, PSI, NEW YORK RESEARCH CENTER FOR STRUCTURAL GENOMICS, TRANSFERASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1Z9D	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	URIDYLATE KINASE	A	238	1712	72
2	Protein	URIDYLATE KINASE	B	238	1712	72
3	Protein	URIDYLATE KINASE	C	238	1712	72
4	Ligand	URIDYLATE KINASE	A	4	0	20
5	Ligand	URIDYLATE KINASE	B	3	0	15
6	Ligand	URIDYLATE KINASE	C	2	0	10
7	Water			88	0	88
total				811	5136	349

Proteins

Unit 1	GLU 4 PRO 5 LYS 6 TYR 7 GLN 8 ARG 9 ILE 10 LEU 11 ILE 12 LYS 13 LEU 14 SER 15 GLY 16 GLU 17 ALA 18 LEU 19 ALA 20 GLY 21 GLU 22 LYS 23 GLY 24 VAL 25 GLY 26 ILE 27 ASP 28 ILE 29 PRO 30 THR 31 VAL 32 GLN 33 ALA 34 ILE 35 ALA 36 LYS 37 GLU 38 ILE 39 ALA 40 GLU 41 VAL 42 HIS 43 VAL 44 SER 45 GLY 46 VAL 47 GLN 48 ILE 49 ALA 50 LEU 51 VAL 52 ILE 53 GLY 54 GLY 55 GLY 56 ASN 57 LEU 58 TRP 59 ARG 60 GLY 61 GLU 62 PRO 63 ALA 64 ALA 65 ASP 66 ALA 67 GLY 68 MSE 69 ASP 70 ARG 71 VAL 72 GLN 73 ALA 74 ASP 75 TYR 76 THR 77 GLY 78 MSE 79 LEU 80 GLY 81 THR 82 VAL 83 MSE 84 ASN 85 ALA 86 LEU 87 VAL 88 MSE 89 ALA 90 ASP 91 SER 92 LEU 93 GLN 94 HIS 95 TYR 96 GLY 97 VAL 98 ASP 99 THR 100 ARG 101 VAL 102 GLN 103 THR 104 ALA 105 ILE 106 PRO 107 MSE 108 GLN 109 ASN 110 VAL 111 ALA 112 GLU 113 PRO 114 TYR 115 ILE 116 ARG 117 GLY 118 ARG 119 ALA 120 LEU 121 ARG 122 HIS 123 LEU 124 GLU 125 LYS 126 ASN 127 ARG 128 ILE 129 VAL 130 VAL 131 PHE 132 GLY 133 ALA 134 GLY 135 ILE 136 GLY 137 SER 138 PRO 139 TYR 140 PHE 141 SER 142 THR 143 ASP 144 THR 145 THR 146 ALA 147 ALA 148 LEU 149 ARG 150 ALA 151 ALA 152 GLU 153 ILE 154 GLU 155 ALA 156 ASP 157 ALA 158 ILE 159 LEU 160 MSE 161 ALA 162 LYS 163 ASN 164 GLY 165 VAL 166 ASP 167 GLY 168 VAL 169 TYR 170 ASN 171 ALA 172 ASP 173 PRO 174 LYS 175 LYS 176 ASP 177 ALA 178 ASN 179 ALA 180 VAL 181 LYS 182 PHE 183 ASP 184 GLU 185 LEU 186 THR 187 HIS 188 GLY 189 GLU 190 VAL 191 ILE 192 LYS 193 ARG 194 GLY 195 LEU 196 LYS 197 ILE 198 MSE 199 ASP 200 ALA 201 THR 202 ALA 203 SER 204 THR 205 LEU 206 SER 207 MSE 208 ASP 209 ASN 210 ASP 211 ILE 212 ASP 213 LEU 214 VAL 215 VAL 216 PHE 217 ASN 218 MSE 219 ASN 220 GLU 221 ALA 222 GLY 223 ASN 224 ILE 225 GLN 226 ARG 227 VAL 228 VAL 229 PHE 230 GLY 231 GLU 232 HIS 233 ILE 234 GLY 235 THR 236 THR 237 VAL 238 SER 239 ASN 240 LYS 241
Unit 2	GLU 4 PRO 5 LYS 6 TYR 7 GLN 8 ARG 9 ILE 10 LEU 11 ILE 12 LYS 13 LEU 14 SER 15 GLY 16 GLU 17 ALA 18 LEU 19 ALA 20 GLY 21 GLU 22 LYS 23 GLY 24 VAL 25 GLY 26 ILE 27 ASP 28 ILE 29 PRO 30 THR 31 VAL 32 GLN 33 ALA 34 ILE 35 ALA 36 LYS 37 GLU 38 ILE 39 ALA 40 GLU 41 VAL 42 HIS 43 VAL 44 SER 45 GLY 46 VAL 47 GLN 48 ILE 49 ALA 50 LEU 51 VAL 52 ILE 53 GLY 54 GLY 55 GLY 56 ASN 57 LEU 58 TRP 59 ARG 60 GLY 61 GLU 62 PRO 63 ALA 64 ALA 65 ASP 66 ALA 67 GLY 68 MSE 69 ASP 70 ARG 71 VAL 72 GLN 73 ALA 74 ASP 75 TYR 76 THR 77 GLY 78 MSE 79 LEU 80 GLY 81 THR 82 VAL 83 MSE 84 ASN 85 ALA 86 LEU 87 VAL 88 MSE 89 ALA 90 ASP 91 SER 92 LEU 93 GLN 94 HIS 95 TYR 96 GLY 97 VAL 98 ASP 99 THR 100 ARG 101 VAL 102 GLN 103 THR 104 ALA 105 ILE 106 PRO 107 MSE 108 GLN 109 ASN 110 VAL 111 ALA 112 GLU 113 PRO 114 TYR 115 ILE 116 ARG 117 GLY 118 ARG 119 ALA 120 LEU 121 ARG 122 HIS 123 LEU 124 GLU 125 LYS 126 ASN 127 ARG 128 ILE 129 VAL 130 VAL 131 PHE 132 GLY 133 ALA 134 GLY 135 ILE 136 GLY 137 SER 138 PRO 139 TYR 140 PHE 141 SER 142 THR 143 ASP 144 THR 145 THR 146 ALA 147 ALA 148 LEU 149 ARG 150 ALA 151 ALA 152 GLU 153 ILE 154 GLU 155 ALA 156 ASP 157 ALA 158 ILE 159 LEU 160 MSE 161 ALA 162 LYS 163 ASN 164 GLY 165 VAL 166 ASP 167 GLY 168 VAL 169 TYR 170 ASN 171 ALA 172 ASP 173 PRO 174 LYS 175 LYS 176 ASP 177 ALA 178 ASN 179 ALA 180 VAL 181 LYS 182 PHE 183 ASP 184 GLU 185 LEU 186 THR 187 HIS 188 GLY 189 GLU 190 VAL 191 ILE 192 LYS 193 ARG 194 GLY 195 LEU 196 LYS 197 ILE 198 MSE 199 ASP 200 ALA 201 THR 202 ALA 203 SER 204 THR 205 LEU 206 SER 207 MSE 208 ASP 209 ASN 210 ASP 211 ILE 212 ASP 213 LEU 214 VAL 215 VAL 216 PHE 217 ASN 218 MSE 219 ASN 220 GLU 221 ALA 222 GLY 223 ASN 224 ILE 225 GLN 226 ARG 227 VAL 228 VAL 229 PHE 230 GLY 231 GLU 232 HIS 233 ILE 234 GLY 235 THR 236 THR 237 VAL 238 SER 239 ASN 240 LYS 241
Unit 3	GLU 4 PRO 5 LYS 6 TYR 7 GLN 8 ARG 9 ILE 10 LEU 11 ILE 12 LYS 13 LEU 14 SER 15 GLY 16 GLU 17 ALA 18 LEU 19 ALA 20 GLY 21 GLU 22 LYS 23 GLY 24 VAL 25 GLY 26 ILE 27 ASP 28 ILE 29 PRO 30 THR 31 VAL 32 GLN 33 ALA 34 ILE 35 ALA 36 LYS 37 GLU 38 ILE 39 ALA 40 GLU 41 VAL 42 HIS 43 VAL 44 SER 45 GLY 46 VAL 47 GLN 48 ILE 49 ALA 50 LEU 51 VAL 52 ILE 53 GLY 54 GLY 55 GLY 56 ASN 57 LEU 58 TRP 59 ARG 60 GLY 61 GLU 62 PRO 63 ALA 64 ALA 65 ASP 66 ALA 67 GLY 68 MSE 69 ASP 70 ARG 71 VAL 72 GLN 73 ALA 74 ASP 75 TYR 76 THR 77 GLY 78 MSE 79 LEU 80 GLY 81 THR 82 VAL 83 MSE 84 ASN 85 ALA 86 LEU 87 VAL 88 MSE 89 ALA 90 ASP 91 SER 92 LEU 93 GLN 94 HIS 95 TYR 96 GLY 97 VAL 98 ASP 99 THR 100 ARG 101 VAL 102 GLN 103 THR 104 ALA 105 ILE 106 PRO 107 MSE 108 GLN 109 ASN 110 VAL 111 ALA 112 GLU 113 PRO 114 TYR 115 ILE 116 ARG 117 GLY 118 ARG 119 ALA 120 LEU 121 ARG 122 HIS 123 LEU 124 GLU 125 LYS 126 ASN 127 ARG 128 ILE 129 VAL 130 VAL 131 PHE 132 GLY 133 ALA 134 GLY 135 ILE 136 GLY 137 SER 138 PRO 139 TYR 140 PHE 141 SER 142 THR 143 ASP 144 THR 145 THR 146 ALA 147 ALA 148 LEU 149 ARG 150 ALA 151 ALA 152 GLU 153 ILE 154 GLU 155 ALA 156 ASP 157 ALA 158 ILE 159 LEU 160 MSE 161 ALA 162 LYS 163 ASN 164 GLY 165 VAL 166 ASP 167 GLY 168 VAL 169 TYR 170 ASN 171 ALA 172 ASP 173 PRO 174 LYS 175 LYS 176 ASP 177 ALA 178 ASN 179 ALA 180 VAL 181 LYS 182 PHE 183 ASP 184 GLU 185 LEU 186 THR 187 HIS 188 GLY 189 GLU 190 VAL 191 ILE 192 LYS 193 ARG 194 GLY 195 LEU 196 LYS 197 ILE 198 MSE 199 ASP 200 ALA 201 THR 202 ALA 203 SER 204 THR 205 LEU 206 SER 207 MSE 208 ASP 209 ASN 210 ASP 211 ILE 212 ASP 213 LEU 214 VAL 215 VAL 216 PHE 217 ASN 218 MSE 219 ASN 220 GLU 221 ALA 222 GLY 223 ASN 224 ILE 225 GLN 226 ARG 227 VAL 228 VAL 229 PHE 230 GLY 231 GLU 232 HIS 233 ILE 234 GLY 235 THR 236 THR 237 VAL 238 SER 239 ASN 240 LYS 241

Ligands

Unit 4	SO4 1001 SO4 1003 SO4 1004 SO4 1007
Unit 5	SO4 1002 SO4 1005 SO4 1008
Unit 6	SO4 1006 SO4 1009